Retrocopy Name | ARF1P1 |
|
Species | Nomascus leucogenys | |
Coordinates | chr1a:66685378-66685566 UCSC | |
Strand | + | |
Parental Sequence | XM_004088032.2 | |
Parental seq. overlap | 155 bp | |
Parental seq. overlap (%) | 8.2% | |
Genomic Region |
Intergenic |
|
Retrocopy Summary | ARF1P1, located on chr1a:66685378-66685566, is a retrocopy of the parental gene ARF1. Retrocopies of protein-coding genes, also known as processed pseudogenes, are intriguing genomic elements with implications in genome evolution and diseases. While some retrocopies are non-functional, there are examples of retrocopies (retrogenes) acquiring regulatory roles or exhibiting neofunctionalization unrelated to their parental genes. |
Gene Name | ARF1 |
Full Name | N/A |
Also known as | ARF1 |
Coordinate | chr5:19986925-20003549 |
Strand | - |
Gene summary | N/A |
>ARF1P1 |
GGAAATGCGGATCCTCATGTTGGGCCTGGACGCGGCCGGCAAGACAACAATCCTGTACAAGTTGAAGCTGGGCCAGTCGGTGACCACCATTCCCACTGTGGGTTTCAACGTGGAGACGGTGACTTACAAAAATGTCAAGTTCAACGTATGGGATGTGGGCGGCCAGGACAAGATCCGGCCGCTCTGGCG |
>XM_004088032.2 |
CCTTACCCGGCGTGCCCCGCGCCCGCAGGCGCTGACGTGGCCGCCGTCAGAGCCGCCATCTTGTGGGAGCAAAACCAACGCCTGGCTTGGAGCAGCAGCCTCTGAGGTGTCCCTGGCCAGTGTCCTTCCACCTGTCCACAAGCATGGGGAACATCTTCGCTAACCTCTTCAAGGGCCTTTTTGGCAAAAAAGAAATGCGCATCCTCATGGTGGGCCTGGATGCTGCAGGGAAGACCACGATCCTGTACAAGCTTAAGCTGGGTGAGATCGTGACCACCATTCCCACCATAGGCTTCAACGTGGAAACTGTGGAGTACAAAAACATCAGCTTCACTGTGTGGGACGTGGGTGGCCAGGACAAGATCCGGCCCCTGTGGCGCCACTACTTCCAGAACACACAAGGCCTGATCTTCGTGGTGGACAGCAATGACAGAGAGCGCGTGAACGAGGCCCGTGAGGAGCTCATGAGGATGTTGGCCGAGGACGAGCTCCGGGATGCTGTCCTCCTGGTGTTCGCCAACAAGCAGGACCTCCCCAACGCCATGAATGCGGCCGAGATCACAGACAAGCTGGGGCTGCACTCCCTACGCCACAGGAACTGGTACATTCAGGCCACCTGCGCCACCAGCGGCGACGGGCTCTATGAAGGACTGGACTGGCTGTCCAATCAGCTCCGGAACCAGAAGTGAACGCGACCCCCCTCCCTCTCACTCCTCTTGCCCTCTGCTTTACTCTCATGTGGCAAACGTGCGGCTCGTGGTGTGAGTGCCAGAAGCTGCCTCCGTGGTTTGGTCACCGTGTGCATCGCACCGTGCTGTAAATGTGGCAGACGCAGCCTGCGGCCAggctttttatttaatgtaaatagTTTTTGTTTCCAATGAGGCAGTTTCTGGTACTCCTATGCAATATTACTCAgctttttttattgtaaaaagaaaaatcaactcactGTTCAGTGCTGAGAGGGGATGTAGGCCCATGGGCACCTGGCCTCCAGGAGTCGCTGGTTGGGAGAGCCGGGCACACCCTTGGCTTTAGAGCTGTGTTGAAATCCATTTTGGTGGTTGGTTTTTAATCCAAACtcagtgcattttttaaaatagttaagaatCCAAGTCGAGAACActtgaacacaaagaagggagacCCCGCCTAGCATAGATTTGCAGTTATGGCCTGGATGCCAGTCGCCAGCCCAGCTGTTCCCCTCAGGAACATGAGGTGGTGGTGGCGCAGCAGACCGCGATCAATTCTGCATGGTCACAGTAGAGATCCCCGCAACTCGCTTGTCCTTGGGTCACCCTGCATTCCATAGCCACGTGCTTGTCCCTGTGCTCCCACGGTTCCCAGGGGCCAGGCTGGGAGCCCACAGCCACCCCACTCTCCCGCAGGCTGCCCCACCCACCTTCAGGCAGCCTGTGGGACGCAGGGCCCCATCTGTCCCTCGGTCACCGTGTGGCCAGAGTGGGTCCGTCATCCCCAACACTCGTGCTCGCTCAGACACTTTGGCAGGATGTCTGGGGCCTCACCAGCAGGAGCGCGTGCAAGCCGGGCAGGCGGTCCACCTAGACACCACAGCCCCTCGGGAGCACCCCACCTCCATGTGTGATGTAGCTTTCTCTCCCTCAGCCTGCAAGGGTCCGATTTGCCATCGAAAAAGACAacctctacttttttcttttgtattttgataaACACTGAAGAAGCTGGAGCTGTTAAATTTATCTTGGGGAAACCTCAGAACTGGTCTATTTGGTGTCGTGGAACCTCTTACTGCTTTCAATACACGATTAGTAATCAACTGTTTTGTAtacttgttttcagttttcatttcgACAAACAAGCACTGTAATTATAGCTATTAGAATAAAATCTCTTAACTATTT |
PMID - Link | Title |
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