Retrocopy Name | ARF1P10 |
|
Species | Callithrix jacchus | |
Coordinates | chr10:80957302-80957493 UCSC | |
Strand | + | |
Parental Sequence | XM_002760826.5 | |
Parental seq. overlap | 158 bp | |
Parental seq. overlap (%) | 8.2% | |
Genomic Region |
Intergenic |
|
Retrocopy Summary | ARF1P10, located on chr10:80957302-80957493, is a retrocopy of the parental gene ARF1. Retrocopies of protein-coding genes, also known as processed pseudogenes, are intriguing genomic elements with implications in genome evolution and diseases. While some retrocopies are non-functional, there are examples of retrocopies (retrogenes) acquiring regulatory roles or exhibiting neofunctionalization unrelated to their parental genes. |
Gene Name | ARF1 |
Full Name | N/A |
Also known as | - |
Coordinate | chr19:36197527-36213471 |
Strand | + |
Gene summary | N/A |
>ARF1P10 |
CAAGGAAATGCGGATCCTCATGTTGGGCCTGGACGCGGCCGGCAAGACAACAATCCTGTACAAGTTGAAGCTCGGCCAGTCAGTGACCACCATTCCCACCGTGGGTTTCAACGTGGAGACGGTGACTTACAAAAATGTCAAGTTCAACGTGTGGGATGTGGGCGGCCAGGACAAGATCCGGCCGCTCTGGCG |
>XM_002760826.5 |
GCGCCTGCTCCGCGGGCGAGCGGTGGGAGGAGTTCCCTGTGTCTCCGCCCCTTACCCGGCGTGCTCTGCGTCCGCAGGCGCTGACGTGGCCGCCGTCAGAGCCGCCATCTTGTGGGAGCGAAACCAACGCCTGGCTCGGAGCAGCAGCCGCTGAGGTGTCCCTGGCCAGTGTCCTTCCACCTGTCCACAAGCATGGGGAACATCTTCGCCAACCTCTTCAAGGGCCTTTTTGGCAAAAAGGAAATGCGCATCCTCATGGTGGGCCTGGATGCTGCAGGGAAGACCACGATCCTGTACAAGCTAAAGCTGGGTGAGATCGTGACCACCATTCCCACCATAGGCTTCAATGTGGAAACCGTGGAGTACAAGAACATCAGCTTCACTGTGTGGGATGTGGGTGGCCAGGACAAGATCCGGCCTCTGTGGCGCCACTACTTCCAGAACACACAAGGCCTGATCTTCGTGGTGGACAGCAATGATAGAGAGCGCGTGAACGAGGCCCGTGAGGAGCTCATGAGGATGCTGGCTGAGGATGAGCTCCGGGATGCTGTCCTCCTGGTGTTCGCCAACAAGCAGGACCTCCCCAACGCCATGAATGCGGCCGAGATCACAGACAAGCTGGGGCTGCACTCCCTACGCCACAGGAACTGGTACATTCAAGCCACCTGCGCCACCAGCGGTGACGGGCTGTATGAAGGACTGGACTGGCTGTCCAATCAGCTCCGGAACCAGAAGTGAACGCAATCCCCTCCCTCTCACTCCTCTCACCCTCTGCTTTACTCTCATGTGGCAAACGTGCGGCTTGTGGTGTGAGTGCCAGAAGCTGCCTCCGTGGTTTGGTCACCGTGTGCATCGCACCGTGCTGTAAATGTGGCAGACGCAGCCTGCGGCCAggctttttatttaatgtaaatagtTTTTGTTCCCAATGAGGCAGTTTCTGGTACTCCTATGCAATATTACTCagctttttttattgtaaaaagaaaaatcaactcactGTTCAGTGCTGAGAGGGGATGTAGGCCTGTGGGCACCTGGCCTCCAGGAGTCGATGTGTTGGGAAAGCCGGGCACGCTCTTGGCTTTAGAGCTGTGTTAAAATCCATTTTGGTGGTTGGTTTTTAACCCAAACTcagtgcatttttttaaatagttaaaaatccAAGTCGAGAACACTTGAACACACAGAAGGGAGACCCTGCCTAGCATAGATTTGCAGTTATGGCCTGGATGCCGGTCGCCAGCCCGGCTGTTCCCCTTGGGAATGTGAGGCGGTGGCGCGGCAGACCGCGATCAATTCTGCATGGTCACAATAGAGATCCCGCAACTCGCTTGTCCTTGGGTCACCCTGCATTCCATAGCCATGTGCTTGTTCTTGTGCCCCCATGGTtcccaggggccaggctgggagcCCACAACCGCCCCCACTCTCCTGCAGGCCGCCCCGCCCACCTTCAGGCAGCCTGTGGGAAACAGGGCCTCACCTGTCCCTCGGTCAGCATGTGGCCAGAGTGAGTCCGTCATTCCCACTGCTCGTGCTCGCTCAGACACTTTGGCAGGATGTCTGGGGTCTCACCAGCAGGAGCGCGTGCAAGCCGGGCAGGCGGTCCACCTAGACCCACAGCCCCTCGGGAGCACCCCACCTCCGTGTGTGACGTAGCTTTCTTTCCCTCAGCCTGCAAGGGTCCGATTTGCCATCGAAAAAGAacctctacttttttcttttgtattttgataaACACTGAAGAAGCTGGAGCTGTTAAATTTATCTTGGGGAAACCTCAGAACTGGTCTGTTTGGTGTCGTGGAGCCTCTTACTGCTTTCAGTACACGATTGGTAATCAACCGTTTTGTAtacttgttttcagttttcatttcgaCAAACAAGCACTGTAATTATAGCTATTAGAATAAAATCTCTTAACTATTTCA |
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