| Retrocopy Name | Arf1P3 |
|
| Species | Rattus norvegicus | |
| Coordinates | chr6:91697296-91697484 UCSC | |
| Strand | + | |
| Parental Sequence | NM_022518.3 | |
| Parental seq. overlap | 157 bp | |
| Parental seq. overlap (%) | 17.5% | |
| Genomic Region |
Intergenic |
|
| Retrocopy Summary | Arf1P3, located on chr6:91697296-91697484, is a retrocopy of the parental gene Arf1. Retrocopies of protein-coding genes, also known as processed pseudogenes, are intriguing genomic elements with implications in genome evolution and diseases. While some retrocopies are non-functional, there are examples of retrocopies (retrogenes) acquiring regulatory roles or exhibiting neofunctionalization unrelated to their parental genes. |
| Gene Name | Arf1 |
| Full Name | ADP-ribosylation factor 1 |
| Also known as | - |
| Coordinate | chr10:45562700-45579214 |
| Strand | - |
| Gene summary | Enables guanyl ribonucleotide binding activity; magnesium ion binding activity; and phospholipase D activator activity. Involved in several processes, including Golgi to transport vesicle transport; positive regulation of transport; and postsynapse organization. Located in cytosol and late endosome. Is active in glutamatergic synapse and postsynaptic density. Colocalizes with COPI-coated vesicle; Golgi apparatus; and peroxisomal membrane. Human ortholog(s) of this gene implicated in periventricular nodular heterotopia. Orthologous to human ARF1 (ADP ribosylation factor 1). [provided by Alliance of Genome Resources, Apr 2022] |
| >Arf1P3 |
| GGAAATGCGGATCCTCATGCTGGGCCTGGACGCAGCCGGCAAGACAACGATCCTGTACAAGTTGAAGCTGGGCCAGTCTGTGACCACCATTCCCACGGTGGGTTTCAACGTGGAGACGGTGACTTACAAAAACGTCAAGTTCAACGTGTGGGATGTGGGCGGCCAGGACAAGATCCGGCCGCTCTGGCG |
| >NM_022518.3 |
| GCGGCTGCTAAGGACCGAGTCTGGTCGGGCGGCCTGAGGTCTCTGGCCAGTATCGCTTCCACCTGTCCACAAACATGGGGAATATCTTTGCAAACCTCTTCAAGGGCCTTTTTGGCAAAAAAGAAATGCGCATTCTCATGGTGGGCCTGGATGCTGCAGGGAAGACAACAATTCTATACAAACTGAAGCTGGGCGAAATTGTGACCACCATTCCCACCATTGGTTTCAACGTGGAGACTGTTGAATACAAGAATATCAGCTTCACCGTGTGGGATGTGGGTGGCCAGGACAAGATTCGGCCGCTGTGGCGCCACTACTTCCAGAACACCCAAGGCTTGATCTTCGTAGTGGACAGCAATGACAGAGAGCGTGTGAACGAGGCCCGTGAAGAGCTTATGAGGATGCTAGCTGAAGATGAGCTCCGAGATGCCGTTCTCTTGGTGTTTGCCAACAAGCAGGACCTCCCCAATGCCATGAATGCGGCCGAAATCACAGACAAGCTGGGGCTGCACTCTCTACGCCACAGGAACTGGTACATTCAGGCTACCTGTGCCACCAGCGGAGACGGGCTCTATGAAGGACTAGATTGGCTGTCTAATCAGCTCCGGAACCAGAAGTGAACCAGACCCCTCCTTCCCCCTCACTTCCTCTTCTCCGCCCTCAGCTTTCCTCTCATGTGGCAAACGTGCGACTCTGTGGTCCTGAGTGCCAGAAGCTGTCTCCATGGGTTGGTCACAGTGTGCATCGCACCGTGCTGTACATGTGCAGACGCAGCCTGCAGCCAGGTTTTTATTTAATGTAAATAGTTTCTGTTTCCACTGAGGCAGTTTCTGGTACTCCTATGCAATATTACTTAGCTTTTTTATTGTAAAAAGAGAATCAACTCACTGTCAGTAC |
| PMID - Link | Title |
|---|
