Retrocopy Name | LOC00388P1 |
|
Species | Rhinolophus ferrumequinum | |
Coordinates | scaffold_m29_p_8:41360464-41360659 UCSC | |
Strand | - | |
Parental Sequence | LOC00388_x2 | |
Parental seq. overlap | 156 bp | |
Parental seq. overlap (%) | 28.6% | |
Genomic Region |
Intergenic |
|
Retrocopy Summary | LOC00388P1, located on scaffold_m29_p_8:41360464-41360659, is a retrocopy of the parental gene LOC00388. Retrocopies of protein-coding genes, also known as processed pseudogenes, are intriguing genomic elements with implications in genome evolution and diseases. While some retrocopies are non-functional, there are examples of retrocopies (retrogenes) acquiring regulatory roles or exhibiting neofunctionalization unrelated to their parental genes. |
Gene Name | LOC00388 |
Full Name | N/A |
Also known as | NULL |
Coordinate | scaffold_m29_p_10:49635882-49653040 |
Strand | - |
Gene summary | N/A |
>LOC00388P1 |
GGGAACAAGGAAATGCGGATCCTCATGTTGGGCCTGGACGCGGCCGGCAAGACAACAATCCTGTACAAGTTGAAGCTGGGCCAGTCAGTGACCACCATCCCCACCGTGGGTTTCAACGTGGAGACGGTGACTTATAAAAACGTCAAGTTCAACGTGTGGGATGTGGGCGGCCAGGACAAGATCCGGCCGCTCTGGC |
>LOC00388_x2 |
ATGGGCAACATCTTTGGGAACCTTCTCAAGAGCCTGATTGGGAAGAAGGAGATGCGTATCCTGATGGTGGGCCTGGATGCTGCCGGGAAGACCACCATCCTGTATAAGCTGAAACTGGGGGAGATTGTCACCACCATCCCCACCATCGGGTTCAATGTGGAGACAGTGGAGTACAAGAACATCAGCTTCACAGTTTGGGATGTTGGTGGCCAGGACAAGATTCGGCCTCTCTGGAGACACTACTTCCAGAACACCCAAGGGCTGATATTTGTGGTGGACAGCAATGATCGGGAGCGAGTGAATGAAGCGCGGGAGGAGCTGATGAGGATGCTGGCAGAGGACGAGCTCCGGGATGCAGTGCTCCTCGTCTTCGCAAACAAACAGGATTTGCCTAATGCCATGAATGCTGCTGAGATCACAGACAAGTTGGGCCTGCATTCCCTGCGTCATCGCAACTGGTACATTCAGGCCACTTGTGCCACCAGCGGGGACGGGCTGTACGAAGGCCTGGACTGGCTGGCCAATCAGCTCAAAAACAAGAAGTGA |
PMID - Link | Title |
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