| Retrocopy Name | C16H16orf72P1 |
|
| Species | Pongo abelii | |
| Coordinates | chrX:134909524-134909696 UCSC | |
| Strand | + | |
| Parental Sequence | XM_002826106.4 | |
| Parental seq. overlap | 141 bp | |
| Parental seq. overlap (%) | 3.3% | |
| Genomic Region |
Intergenic |
|
| Retrocopy Summary | C16H16orf72P1, located on chrX:134909524-134909696, is a retrocopy of the parental gene HAPSTR1. Retrocopies of protein-coding genes, also known as processed pseudogenes, are intriguing genomic elements with implications in genome evolution and diseases. While some retrocopies are non-functional, there are examples of retrocopies (retrogenes) acquiring regulatory roles or exhibiting neofunctionalization unrelated to their parental genes. |
| Gene Name | HAPSTR1 |
| Full Name | N/A |
| Also known as | C16H16orf72 |
| Coordinate | chr16:10004676-10032995 |
| Strand | + |
| Gene summary | N/A |
| >C16H16orf72P1 |
| AAGCAGAAGCTGTGGCACCTCTTCCAGATCTCGGCCACCGCCGTTGCTCAGCTTTACAAGGATTCTGGGTGCCAACAGCAGGGACTTTCCATGTGGGACCCCTTCCAGAATGCGGCCATGGCCGTGACCAGCCTCTACAAAGAGAGCGGGGATGCCCACCAACGAAGTTTTGA |
| >XM_002826106.4 |
| TTGGCTCGGACGCAACCACTGTCAGctcctccccctcctccttcttcatccttcctGACATTCACTCCCTTCCCCCAGCCAATTGGTTACGTCAGGCAGACAGGCCGAAGAACCAATCACGACGCTGTGCTCAGAAGCCGCCACGCGGAACCGGTCGGATCCGACTAATAGGGGCCCTTGGAGCGGCCACGCCTCAACCTGGCAGGGGAGCTCGGGCCTAGTGGGCGGTGCTTCTCCAGTCAGCATGTGGGCGGGGTAGGGCGGGGACCAGCAGCCGCAGAGCCGTCCTCGGCGGCGGCGACGACGACGACGTTGCTCAGTCTTGGGGTGGGCTCGGCGGTGCGGGCCGAGCTGCGCGGAGGTCTCGGCGGTCAGCGGCGGCGGCGGCAGTGGGGAGGCCGCAGCGCCATGGGGGGGCGTTAGGCTGTGGCGGGCTAGGCGAGGGGCGGCAGCGGTCATCTGGTCCGCGGCGACCTTCGGCCGGGCCCTGGGGTGGGAAGGCCTGGGGCGGGGGTCGTCCCTGGTTGCACGGGGCCGCGGGGCGGGGCTCGCCGGCCGTCGGGGTGTAGGAGGCCTGGGTCGCTGAAAGGAGGAGGCGCCACCGGCCGCCAGGCCCTGCCGCCGGGCCGCTTGACGACGACGCTCCCgcgggggccccgcctgaggaggacgcggcggcggtggcggcgaggccgcgggaggccgcggaggatggaggagcggaaggaggagggcgaggCCGAGATCCAGGAGCACGGGCCCGAGCATTGGTTCTCCAAGTGGGAGCGACAGTGCTTGGCCGAGGCCGAGCAGGACGAGCAGCTGCCCCCCGAGCTGCAGGAGGAGGCGGCGGCCGCCGCGCAGCCCGAGCACAAGCAGCAGAAGCTGTGGCATCTCTTCCAGAACTCGGCCACCGCAGTGGCCCAGCTCTACAAAGACCGAGTGTGTCAGCAGCCAGGACTTTCTCTCTGGGTCCCCTTCCAAAACGCAGCCACCGCCGTCACCAACCTCTACAAAGAAAGCGTGGATACCCATCAACGAAGTTTTGATATTGGAATTCAGATTGGCTATCAGCGACGCAATAAGGATGTGTTGGCTTGGGTTAAAAAACGCAGAAGAACTATTCGTCGAGAAGATTTGATCAGCTTCCTGTGTGGAAAAGTTCCTCCACCACGAAACTCTAGAGCTCCCCCAAGACTGACTGTAGTGTCCCCTAACCGAGCTACTTCAACGGAAACTAGCTCATCTGTAGAGACTGATTTGCAACCCTTCCGGGAAGCCATAGCTCTGCATGGTCTTAGTGGTGCAATGGCTAGTATAAGCGTGCGTTCGAGTACCCCAGGCTCTCCTACACATGTAAGCAGTGGATCGAATGCTAGTCGAAGGAGAAATGGACTCCATGATGTCGATTTGAACACTTTCATATCAGAAGAAATGGCACTCCACTTGGACAATGGTGGAACTAGAAAGCGTACCTCAGCCCAGTGTGGCGATGTCATTACAGACTCACCAACCCATAAACGCAACAGAATGATCTAAACTGCAAACATTTTCACACCCACCATGCTGCTTGAAAGCCACTTGATCCTCAACATATACTATAATTGCAAAGGAAACATGAGGCCATCTTCCCTTGTTCACTGTTTAAGACAAGTGAATTCTATAGTGGTTGCCATAAAAGGAAGTTCTAGGTATTTATAGTAGATGCCTCTTGTAATTATGGCTTTCTTAAAACTATAATCCTAGCAGAGGACATCAGATATTGTGTAGTCGTTAGCAAGATCATCATAGGCAAACATATATCCGTTCCAAGGCTAAAAGTGACCTTAACTGTATTTATTCTCAAAGGGAAAGGAATATCAGATGTTTATTTGGTTATAGAATGCtttttttttttttttttttttttGGGGTCCATTTCCTGCTGTGTTGAGTATTTTGCTTCAACAGTATTGCCAGTTTCCTAAAATTGTCTAAAAACATGATTTGGCTTCCATTTTTGCAGCTGCACTGTACCATGCACCTGGTTTCTATATAGTAACAGTGTGCAATTCTAATTATTGGACTGTGCCCTGTTTTTAGTTTTCAAAGCAGTTTCTAATTCTGGTGATTGTGTGATGTAAAGAGGTGCTATGATGGTCATGCAATTAATACTAAATATTGAATCAATGCACAGAGCTTTATTGGATTCACTTTGTGTGTGTTAGTGCTCTAAAGTAGCAATATTATTATTAAACTGCCCCCAGATTAACCCTGTAGGCCTAAAGTAGTCAGTTTTAAGACAAACACTACTTCCCATGCGGGGTACTTTCCTTATGGTAAATGTAAACATGTAGACTGCATTCAAGGTGACCTAAAGTAGAGAGGTCATGAACTTTGAGAATGGGCTTCCTTTTTGGTTCAGTATTAGTGAGAGGGAGAGGGAGATGGATGGTGGGATAGGTTTTCTAGTCTATCATTTTACATTTTTCATGGAGTCCCTGCTTAGTGCAGTTTCCATTGGAATGGGTGGAAGATGATAAAGCTTTTATCTACTAATAATGTGATTGCAACTTAAAATAGCAAAACCCAACTCTCCCTGTCCCTCCAATCCCTCTCCTAAAAAGTTCAGTTTGGAATCTCATTCTGGAAAAGATGGAATCGCATGGAGATTCTCTAGCTGTTAGGTAGACCTAAATAAAAGTTCTCAATAGATTCCTCTTTTGAGTAAATATAAGACCTCTTGTAGCTACAATGTTTTAGAGCATGTTTCATCTTCATTTTTAATATCCTGAACTGAATGATAGTGTTTTTTTAGATGAAGAACTGATGTCAGCCTGCCAGGTACTGTAatttattctatcatattattatattatatATCAAGTAGGACAGTGAAAAATGTTTCCTTGCAAACTTGTAGTCCAGTATCAGTTACTTCCTATTTTTATCCTTAAAAGACCATTGCAAATCAGTGTAAGGGTTTTTCCAGTAATTACTCACAGCACTTTGTTAAAGTTTGCAATTTCTTCAGCCATTTAATAATATCTTTCTGTGAAGAAACTTTGCTGAGTTAACCATAAATATTCATTCATTGACTGGGTGGGATGTGAATGGAATGTTAGAAATGTTGTGTGAATTGAAGTTCTGTATTCATTATAGATGTAGCCCTTATTTAAAAAAGTGAATTCCATACTAAAACTAGGAATGAAAGTGAGATATTTCTAAATTTTTGCAAAAGTGGATCATTTTTTGTTTGACTATAATAGCAGGAAGAATTATAGCAATCTGTCCTTTTACCCGAAACAGACAAGCCTATGTATTATGAATACTTTCAAGCTTCCCTTTGGAATATACAAGACATGCATTTGGAGTTACCTTTGTTTTTCTATCGTTGTAAATTTAGATTCTGGAATTGGGGTTTGGTGGTGCAATATGTTGCTCACAAGTGGCCAGAACTCCTATTCCTAAAAGGATTTTGAGATGGAGGAACACATATTTAATTCCCCTTTATGCCTTGGTTCTCGTTCCTCTTTCCACGTTGGATAACAATtttttggttgttttgtttaagttggtgctctgaagcttaatctcagtaccctttactctgaattgtcaaattttgataaaacgtgccattttctttggtaagagaagcaGGTCTTAATGTCTGCCAGAACACAATTTATATGCCTTATTGGCTTCATTAAACTTTTACAAAACTTTAGCATTTGTTAATTTTTTCCATTGCATTTACTTTCAAATGCACCTAATGCATTTGTCACCCAGTCGCAACTTTTCCCTTCTCCGTCCCATTGCTCTCTCCTTTCCCCCACGCACAGAATAAACATGAAGCTCAGCCGTAGAAGCGTAATGATTTCTCTTAGGAAAAACTTCTGACAGCTAGATTTTTCAAGTGTTTCCCTGTGCTAGTTTAGATGCAAAACAAATCATGGAAGATTGCATACCTGTGTGGTACTTTAAAAACAAGTTGACTTTTTCAGTTTCTTGAACAGTTAAGGGTGGATTTAAAAACTAGACAGTTTAGTTTGGGGGAGCAGAACCTGTCTTCGTCTTAAGCCAGATTCTCTGATTCTTTTAGACGTCATAGCTCCTTAGTTCTGCTCCTGTTGCCCTAACTTGGCGTGGGCAAGTTGAAGTTCATCCTTAGACTGCAGCGTTCTGAGCATGGCTGAAGTATTATAATGTTTAATATTTTATAGAGCAAAATTTATGGAAAGCATTTGGCTGAATCTAAAGACCTGCAGTCAGATTCTTCAATGTGGTTTACCCAACTGGAGTAGTGATACACACCTTAATCATAAAATGAATAAAAACAAAAAAACCA |
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