| Retrocopy Name | C3H16orf72P1 |
|
| Species | Sus scrofa | |
| Coordinates | chrX:114686614-114686789 UCSC | |
| Strand | + | |
| Parental Sequence | XM_003354616.4 | |
| Parental seq. overlap | 149 bp | |
| Parental seq. overlap (%) | 3.6% | |
| Genomic Region |
Intragenic (Ankib1) |
|
| Retrocopy Summary | C3H16orf72P1, located on chrX:114686614-114686789, is a retrocopy of the parental gene HAPSTR1. Retrocopies of protein-coding genes, also known as processed pseudogenes, are intriguing genomic elements with implications in genome evolution and diseases. While some retrocopies are non-functional, there are examples of retrocopies (retrogenes) acquiring regulatory roles or exhibiting neofunctionalization unrelated to their parental genes. |
| Gene Name | HAPSTR1 |
| Full Name | HUWE1 associated protein modifying stress responses |
| Also known as | C3H16orf72 |
| Coordinate | chr3:33626961-33655338 |
| Strand | - |
| Gene summary | N/A |
| >C3H16orf72P1 |
| GAGCAGCAGAAGCTGTGGCACCTCTTCCAGATCTCAGCCACCGCTGTGGCCCAGCTCTACAAGGATACGGGGTGCCAACAGCCAGGACTCTCCATGTGGGACCCCTTCCAGAATGCGGCCATGGCTGTGACCAGCCTCTACAAAGAGAGCGGGGATGCCCATCAACGAAGTTTTGA |
| >XM_003354616.4 |
| CAGCATGTGggcgggggagggcggtgaccagcagccgcagaggcgtcgacggcggcggcgacgacgAAGACGTTCCTCAGTCTTCGGGGTGGGCTCGGTGGCGCAGGCCGGGCTTCGCGGAGGTCTCGGTGGTCTGCGGCGGCGGCCCTAGAGAGGCCGCGGCGCTATGGCGTGGTGGTAGACCGGCTCAGGCCGGCGAGGCGAGGGGCGGCGGCGATCATCCGGTCCGCGGCGACCTTCGGCGGGGCCCGGGGGTAGGGAGACTCGGGGCGGGGGTCGTCCCGGACAGCGCGGGGCCGCGGGGCGGGGCTCGCAGGCCGTCGGGGTGCAGGAGGTCTGGGTCGCCGCGAGGAgccgccgccggccgctgggccccgccaccgggccgctcgacgacgacgctcccgcgggagccccgccTGAGGAGGACGCGGCGGCGGCGGCGAGGCCGCGGGAGGCCGCGGAGGATGGAGGAGCGGAAAGAGGAGGGCGAGGCCGAGATCCAGGAGCACGGGCCCGAGCACTGGTTTTCCAAGTGGGAGCGGCAGTGCCTGGCCGAGGCGGAGCAGGACGAGCAGCTGCCCCCCGAGCTGCAGGAGGAGGCGGCGGCCGCCGCGCAGCCCGAGCACAAGCAGCAGAAACTGTGGCACCTCTTCCAGAACTCGGCCACCGCCGTGGCCCAGCTCTACAAAGACCGAGTGTGTCAGCAGCCAGGACTTTCTCTCTGGGTCCCCTTCCAAAACGCAGCCACCGCTGTCACCAACCTCTACAAAGAAAGCGTGGATACCCATCAGCGAAGTTTTGATATTGGAATTCAGATTGGCTATCAGCGACGCAATAAGGATGTGTTGGCTTGGGTTAAAAAGCGCAGAAGAACTATTCGTAGAGAAGATTTGATCAGCTTCCTGTGTGGAAAAGTTCCTCCACCACGAAACTCTAGAGCTCCCCCAAGACTGACTGTAGTGTCCCCTAACCGAGCTACTTCAACGGAAACTAGCTCATCTGTAGAGACTGATTTGCAACCCTTCCGGGAAGCCATAGCTCTGCATGGTCTTAGTGGTGCAATGGCTAGTATAAGCGTGCGTTCGAGTACCCCAGGCTCTCCTACACATGTAAGCAGTGGATCGAATGCTAGTCGAAGGAGAAATGGACTCCATGATGTCGATTTGAACACTTTCATATCAGAAGAAATGGCACTCCACTTGGACAATGGTGGAACTAGAAAGCGTACCTCAGCCCAGTGTGGCGATGTCATTACAGACTCACCAACCCATAAACGCAACAGAATGATCTAAACTGCAGACATTTTCACACCCACCATGCTGCTTGAAAGCCACTTGATCCTCAACATATACTATTATTGCAAAGGAAACATGAGGCCATCTTCCCTTGTTCACTGTTTAAGACACGTGAATTCTATAGTGGTTGCCATAAAAGGAAGTCCTAGGTATTGACAGTAGATGCCTCTTGTAACTATGGCTTTCTTAAAACTATAATCCTAGCAGAGGACATCAGATATCGTGTAGTCGTTAGCAAGATCATCATAGGCAAACATATATCCGTTTCAAGGCTAAAAGTGACCTTAACTGTATTTATTCTCAAAGGGAAAGGAAATATCAGATGTTTATTTGGTTATAGAATGCTTTTTTTGGGGGGGGGAGCGTCCATTTCCTGCTGTGTTGAGTATTTTTGCTTCAACAGTATTGCCAGGTTCCTAAAATTTGTCTAAAAGACACGATTTGGCTTCCTCGTCAAATCTTCAGGCTTCCATTTCTGCAGCAAATCTTCAGGCTTCCATTTCTGCAGCAGCGCTGTACCATGCACCTGGTTCCTCTACAGTGACAGTGTGCAATTTCTAATTATTGGACTGTGCCCTATTTTTAGTTTTCAAAGCAGTTTCTAATTCTGGTGAATGTGTGATGTCAAAGAGGTGCTATATGATGGTCATGCAGTTAATGCTTACTATTGAATCAATACACAGAACTTGATTGGATTCACTCTGTGCGTGCTAGTGCTCTAAAAGTAGCCATATTATTAAATTGCCCCCAGATTAACCCCGTAGGCTTAAAATACTCATTTTTTTAAGACAAGTACTGCTTCCCATTGCAGGGTCCTCTCCTTATGATAAATGCACCCGTGTAGACTGCATTCAAGGTTACCTGAAGTAGAGAGGTCATGAACTTTGAGAATGGGCTTCCTTTTTGGTTCAGTATTAGTGAGAGGGAGATGGATGGTGGGAGGGTAGGTATTAGAGTCTTTCATACCCTGTTTTACATTTTTCACGAATGTTCTACTTGATGCAGTTTCCATTGGAATGGGTGGAAGGTCCCGGTCTTTTTTATTTGCTAATAATGTGATCACAACTGAACTAGCAAAACCCACCTTTCCAGTCCCTCTCCTATAAAGTACAGTTTGGAATCTCATTCTGGAAAAGATGGAATCGCATGGAGGTTCTCTAGATGTTAGGTAGAGACTAAATAAAAGTTCTCAGTAGAGTCCTCTTTTGAGTAATTATAAGACCTCTTGTAGCTACAATGTTTTAGAGCATGTTTCATCTTCATTTTTAATGTCTTGAACTGAATGGTAGTCTTTTTTAGATGAAGAACTGATGTCAGCCTGCCAGGTACTGTAatttattctatcatattattttatatatatatctatatatctatatatCAAGTAGGACAGTGAAAATGTTTCCTTGCAAATTTGTAGACCAGTATCAGTTACTTCCTGTTTTTATCCTTAAATGACCATTGCAAATCAGTGTAAGGGTTTTTCCAGTAATGACAGCACTTTCTTCAACCATTTAATAATCTTTCTGTGAAGAAACTTTGCTAAGTTAACCATAATATTCGTTGACCAGGTGGGATGTGAATGGAATATTAGAAACCTGTGAACTGAAGTTCTGTGTTCACCATTGACACAGCCCTTATTTCAGAAGTCATAGTCCATATACTAAAAGTAGGAATGACAGTGAGGCATTTATAAATTTTTGCAAAAGTGGGTCATTTTTTTTTTCTTTTTCGTTTGAATATGATAGCAGGAAGAATTATAGCAGTCTGTCATTTTACCTGAAATGGGCAAGCCTGTGTATTATGAGTACTTTCAAGCTTCCCTTTGGAATATACCAAGAAAGGCATTTGGTGTTATCTTTGTTTTTCTATCGTTGTAAATTTAGATTTTGGAATTGGGTTTGGTGGTGTGAAGCATTGCTCACAAGCGGCCAGAACTCCTCTTCCTGAAGGATTTTTGAGAATGAGGAATACATATTTAATCTCCCCTTTATGCCTTGGTTCTAGTTCCTCTTTCCAAGTTAAATAACAAAAAAAAATTTTTTTTGGTGGTTGTTTTAGTTGGTGCTCTGAAGCTTAATCTTCGTACCTTTTACTCTCGATTGTCAAATTTTGATAAAACGTGCCATTTTCTTTGGTAAGAAAAAGCAGGTCTTCACGTCTGCCAGAACACAATTTATATACCTTATTGGCTCCATTAAACTTTTTAAAAACGTTAGCATTTGTTACTTTTTTTTGCATTGCATTTAATTCTAAATGCTCTTTCCCCCTCCAGTTGAAACTCATTCCCCCCATCTCTGTCTCTTTGCTCTCATGTGCCACCTGAGCACAAAATAAGCTGAGACCTAGGAGAAGAAAGGGAAATGATTTCTCCTAGGAAAACTTAGTTCTGACTGCTAGATTTTTGCGGCCTTTCTTTGTGCCATTGTAGATGCAAAACAAATCATGGAAGATTGCATACTTGTGTGGTACTTTTTTAATAACTCTCCCTCCCCGCCCCCAATCTTTTGAGAACAGTGTAGGCTGAATGGTAAAACATAACAATTTACTCTGGGGGAACAGAACCTCTTTTCATCTCAAGCTAGATTCTCTTGATTCTTTTAGACATCATAGCTCGCAAGTTCTGTTCCTGTCACCCTAACTTGGCATGAGTGGGTTGAGTTAATCCTTTAATACTGCAGTGTTCTGAGCATGGCTGAAGCATTAAAAACTTAAGTATATAATGTTTAGTATTTTATAGAGCAAAATTAATGGAAAGCATTTGGCTGAATCTAAAGACCTGCAGTCAAATTCTTCAATGTGGTTTACCCAACTGGAGTAGTGGTACACACCTTAAATCATTCAATGAATAAATAATTTAAAAAACCAAAAAA |
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