| Retrocopy Name | C13H16orf72P1 |
|
| Species | Equus caballus | |
| Coordinates | chrX:115537066-115537241 UCSC | |
| Strand | + | |
| Parental Sequence | XM_023616340.1 | |
| Parental seq. overlap | 151 bp | |
| Parental seq. overlap (%) | 4.5% | |
| Genomic Region |
Intergenic |
|
| Retrocopy Summary | C13H16orf72P1, located on chrX:115537066-115537241, is a retrocopy of the parental gene HAPSTR1. Retrocopies of protein-coding genes, also known as processed pseudogenes, are intriguing genomic elements with implications in genome evolution and diseases. While some retrocopies are non-functional, there are examples of retrocopies (retrogenes) acquiring regulatory roles or exhibiting neofunctionalization unrelated to their parental genes. |
| Gene Name | HAPSTR1 |
| Full Name | HUWE1 associated protein modifying stress responses |
| Also known as | C13H16orf72 |
| Coordinate | chr13:36074061-36104479 |
| Strand | - |
| Gene summary | N/A |
| >C13H16orf72P1 |
| GAGCAGCAGAGGCTGTGGCACCTCTTCCAGAACTCAGCCACCGCCGTGGCCCAGCTCTACAAGGATTCCGGGTGCCAACAGCCAGGACTGTCCATGTGGGACCCCTTCCAGAGTGCGGCCATGGCCGTGACCAGCCTCTACAAAGAGAGCGGGGATGCCCACCAGCGAAGTTTTGA |
| >XM_023616340.1 |
| GGGGGCGTCCCGGGCGGCGCGGGGCCGCGGGGCGGGACTCGCCGGCCGTCGGGGCGCAGGAGGCCTGGGCCGCCGCGAGGAGCCGCCGCCGGCCGCTGGGCCCCGCCGCCGGGCCGCTCGACGACGACGCTCCCGCGGGGGCCCCGCCTGAGGAGGACGCGGCGGCGGCGGCGGCGAGGCCGCGGGAGGCCGCGGGGGATGGAGGAGCGGAAGGAGGAGGGCGAGGCGGAGATCCAGGAGCACGGGCCCGAGCACTGGTTCTCCAAGTGGGAGCGGCAGTGCCTGGCCGAGGCCGAGCAGGACGAGCAGCTGCCCCCGGAGCTGCAGGAGGAGGCGGCGGCCGCCGCGCAGCCCGAGCACAAGCAGCAGAAGCTGTGGCACCTCTTCCAGAACTCGGCCACCGCCGTGGCCCAGCTCTACAAAGACCGAGTGTGTCAGCAGCCAGGACTGTCGCTCTGGGTCCCCTTCCAAAACGCAGCCACCGCCGTCACCAACCTCTACAAAGAAAGCGTGGATACCCATCAGCGAAGTTTTGATATTGGAATTCAGATTGGCTATCAGCGACGCAATAAGGATGTGTTGGCTTGGGTTAAAAAGCGCAGAAGAACTATTCGTAGAGAAGATTTGATCAGCTTCCTGTGTGGGAAAGTTCCTCCACCACGAAACTCTAGAGCTCCCCCAAGACTGACTGTAGTGTCCCCTAGCCGAGCTACTTCAGCGGAAACTAGCTCATCTGTAGAGACTGATTTGCAACCCTTCCGGGAAGCCATAGCTCTGCATGTCTGTCAACAACCAGGCTGCGGTGGGCAAGGCCAGGACTTCAGGAGCGGAAGGTGCGGGCGAGCCCTGCCTCCATCTCGGGTGAGATGAAGATGCCTGGAACCACTGCGGGCGCATGGTAAGACTCATGGTAGCCGTCAAACATGGGCCTGCTGGTCGTTGTCCATCCCGCTGGGTAAAATTCCTTCTCTGAGTCTGAGGCGCCTCTCTCCTGGGTCCTGCACTAGCCTCCGGCCCCAGTTCCCCCACTTCCTCTCTTTGCTCCACTTCTgtggttctcaacctgcctgcacactagaattggccaggtcaggttgtaccgcagacaaactagacaggactcgttggggtgggacaaggcatgagcgtttctcaagcttccccggtCAGAAGAACCACCATCAGGACCTCTGGTGCACTCTGCAGAGACTTGGGGGGGAGTGGGGCCGTGGCCCTGCCCGGATTGTTTGCCTCCTGGGCAGGTGGCCAGTGGCCCTGGGCTTCTTCGGGCCTCCCTGAGGCTGAGGGCAGCTGCTGATGTCAGAGGACTCTGCCCCTTGCCTCGTTTCCCCTCCCCTCCTGCTGCCTGCCCGTCACCTTCAGTCCCTCAGGCTTGGAGGAAGTCTGGAGTGACTGGTGCATTCCTTGGGGCAGGTGTTGCACTGGTTTGGCAGGAGGAAGTTTGCACACAGGGCCCCGGGGTGCTGTGAGTCATGGCTCACCGGGAGTGACCCAGCAGCTCTGTCCCTAGACGTCTCTTCTCGCCTGCTGGGGCTGTGTCCCCTTGGGAGAGGTTCTAGGACTCCCCACCTACACACACTGAACCCAAAGGTCAGCTGGGCACGGGGTTGTGGTTTTTTTTTTTTAAAAAGGGCAGATTAAAGAATAAAAATGGATCCGAAGTCCTGCCTCCCGGTTACCTGTGTTTATATTTTAAAAATGGCATTGATAATACATGTATTGAGGGGAAATCGTACGGAAGGGTTCAGAAGTCTTCCTGAGCCATCTCCTGGGTGTCATCGTGTGCGCAGGTGAGTCTGGAGTTGTGCGGCCTCCTCTGACTGTGAGGGGAGCTGGGCTGCGGCGGAGGTTGGTGGGCACAGCAGAAAACCGGGAGAACTCTGGTCCTTGAGCGTGGTGGCCATCGAGGCAACTTGACGTGGAATCCTGTTACAAGGAGCGGTTCCCAGCCCAAGAAATCAGGGTGGGGTGCACCCTTCCCCATCCCTGCAGACCCCGGGTCTCCCCGCCTTGTCAAGAGTTATTGGGGGTGCTTTAGAAAAAATGGCTACACGTGTGCACCTGTATACACGTATCCCTGGAAAACAGCAGCCTAAAGGGTCGTTTACATGCTCAACTGCACTTCTGTTTTCCCTTCAAATATGTTGGAGCTCTTGCCCTTATCAGCTTGCATGGGTCTGCATCTTTTATTATGATGACTATTGTGGTGGAAAAGGGGGAAAGATCCCAAGTGCCatcctcgcacccactccatgcccggggcagctaccgatgatctccatttaccagatgaggagagtgaggcttcggtgactggctttgtgactgctgccATATGCAAGGCTGTGCTGGCTGCTGTGCCTGGAGGGAGTGAAGCCTAGGGGTGATGGTGTCACTCatcttggcaagttctgtagccactctgcctcagtttccctgtctgtaaagagggTTGTTTGTGTGCCTGGCACGGAAGAGTAGCCGGCACGTGGTGAGCACTTAGGAACTTCTTCATTCTGGCAGCCTGGCATGTGGGCGAGTTGAAGCCGTTGGTAAATGGTCCCCAGGCTGGTAAGTGGTGACTCCTGTTGGCGGCCGCTCTTGGGGGGGAGTGGAGTGTGCTGAGCTTGGTGGATGATTTAGGTGTAGGGACGTCACCAGGAATGGCTCAGGTGACACTCATTTCTGGGTTCAGCCTGGACCCGTATCCAAGGGCAGGAACAGTCTGTTCCCGGCGGCTCAGGGCCTCAACCTGAACCCATGCACGACAGGAGCGCAGCAGATGGACTCCCGCAGGGCTGCCTGGACCTGACATCAGAGACAGAGCTGTGCAACGGAAGCCTGCTGACATCCGCCCGCCAGGGTGGGCTGCCCTCGTCCACGCGCAGCGGGCTTCTCTCCAGCTGCGGGAGCCTCCTGATGTCCCCGGGCACGGGTAACTGCCCAGGGTCTCACCACCCAGCGGTTGTCTACATCCTTGCACAGGCTCACAGCCCAGCAGGCGGGGAAGACCTGTGAAGGCAGACAGCGTGGCAGGGGGTGGGTGGTTATTCCAGGCCCTGTCCCAGGGCGCAGCGCTGGCCCCTTCTGAGGCTGGGGAGGACCAGGACCTGTGGCATGTCTGCTGTCCCTCCAGCTGGCATTCTCGGTGGGTGCCAGCAGTGAGGATTTCCCTTCCTGGGCGAGACCCAGCAGGGTCCGGGGTCCACCCCACTGGAACCGTCTCCTCCAGAGGCCTCCTCTTGTTCAAGTTTACTTCAGCTGTAAATTTTACACATACTATGGAACACTTCTGATTTATGTCTGCCCCTGGGATGCCCTTGTGCCCACTTTTAAAAAGGCTGTCCCCtt |
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