| Retrocopy Name | 1810013L24RikP1 |
|
| Species | Mus musculus | |
| Coordinates | chrX:59591783-59591953 UCSC | |
| Strand | + | |
| Parental Sequence | NM_001081400.3 | |
| Parental seq. overlap | 141 bp | |
| Parental seq. overlap (%) | 3.5% | |
| Genomic Region |
Intragenic (Scaf8) |
|
| Retrocopy Summary | 1810013L24RikP1, located on chrX:59591783-59591953, is a retrocopy of the parental gene 1810013L24Rik. Retrocopies of protein-coding genes, also known as processed pseudogenes, are intriguing genomic elements with implications in genome evolution and diseases. While some retrocopies are non-functional, there are examples of retrocopies (retrogenes) acquiring regulatory roles or exhibiting neofunctionalization unrelated to their parental genes. |
| Gene Name | 1810013L24Rik |
| Full Name | RIKEN cDNA 1810013L24 gene |
| Also known as | 1110017P05Rik|3010002C02Rik|Gm19906|Hapstr1|Tapr1 |
| Coordinate | chr16:8647964-8676788 |
| Strand | + |
| Gene summary | Is expressed in retina; retina inner nuclear layer; and retina outer nuclear layer. Orthologous to human C16orf72 (chromosome 16 open reading frame 72). [provided by Alliance of Genome Resources, Apr 2022] |
| >1810013L24RikP1 |
| CCAGAGGCTCTGGCACCTCTTCCAGATCTCAGCCACGGCAGTGGCCCAGCTCTACAAAGATTCCGGGTGCCAGCAGCCAGGACTCTCTATGTGGGACCCCTTCCAGAACGCGGCCATGGCCGTGACCAGCCTCTACAAAGAGAGCGGGGATGCCTACCAGAGAAGTTTTGA |
| >NM_001081400.3 |
| GAGGCGTCGACGCCGCCGCCGTAGACGACGTTCCTCAGTCTTCGAGGTGGGCTCGGCGGCGCAGGCCGGACAGGGAACGCCGGTTGGAGAGCGGCGGCGGTCGGACCGAGGCCGCGGGGCCGTGGGTGGGCGGTAAAGGGGTGCGGGCGAGGCTAGGGCAGGGTGCGGCACCTCGGAGCGGGGTTGGTGGGCAGAGGACTCGGGCTGTGCGGGGTGGGTGCCGGCTCCGCGGGCTTGCACAGAGGCCTGGGCCGGCCGCCGGGCCCCTCGTTCCCGGGCCTGTCGACGACGACGTTCCCGCGGGGACCGCGCTTAAGGAGgacgcggcggcggcggccaggCCGCGGGAGGCCGCGGAGGATGGAGGAGCGGAAGGAGGAGGGCGAGGCGGAGATCCAGGAGCACGGGCCGGAGCATTGGTTCTCCAAGTGGGAGCGGCAGTGCCTGGCCGAGGCCGAGCAGGACGAGCAGTTGTCTCCCGAGCTGCAGGAGGAGGCGGCGGCCGCCGCGCAGCCCGAGCACAAGCAACAGAAGCTGTGGCATCTCTTCCAGAACTCGGCCACGGCCGTGGCTCAGCTCTACAAAGACCGAGTGTGTCAGCAGCCAGGACTTTCTCTCTGGGTCCCCTTCCAAAACGCAGCCACCGCCGTCACCAACCTCTATAAAGaaAGTGTGGATACCCATCAGCGAAGTTTTGATATTGGAATTCAGATTGGCTATCAGCGACGCAATAAGGATGTGCTGGCCTGGGTAAAAAAGCGCAGAAGAACTATTCGTAGAGAAGATTTGATCAGCTTCCTGTGTGGAAAGGTTCCTCCACCACGAAACTCTAGAGCTCCCCCAAGACTGACTGTAGTGTCCCCTAACCGAGCTACTTCAACGGAAACTAGCTCATCTGTAGAGACTGATTTGCAACCCTTCCGGGAAGCCATAGCTCTGCATGgTCTTAGTGGTGCAATGGCTAGTATAAGCGTGCGTTCGAGTACCCCAGGCTCTCCTACACATGTAAGCAGTGGACCGAATGCTAGTCGAAGGAGAAATGGACTCCATGATGTCGATTTGAACACTTTCATAACAGAAGAAATGGCACTccacttggacaatggtggaacTAGAAAGCGTACCTCAGCCCAGTGTGGCGATGTCATTACAGACTCACCAACCCATAAACGCAACAGAATGCTCTAAACTGCAGACATTTTCACACCCACCATGCTGCTTGAAAGCCACTCGATCCTCAACATATACTATTATTGCAAAGGAAACATGAGGCCATCTTCCCTTGTTCACTGTTTAAGAAAAGTGAATTCTCTAGTGGTTGCCATAAAAGGAAGTTCTAGGTATTTACAGTAGATGCCTCCTGTAACTATGGCTTTCTCAAACTATAATCCTAGCAGAGGACTTGAACTATTGTAGTCATTAGCAAGATCATCATAGGCAAACATATATCCGTTCCAAGGCGAAAAGTGACCTTAACTGTATTTATTCTCaaagggaaaggaaataacaGATGTTTATTTGGTTATAGaatgctttcttatttttattttttggtccaTTTCCTgctgtattgagtatttttacttaAACAGTATTGCCAGGTTCCTACAATTGTCTAAAACCTTGATCTGGCTTGCAAGCCAGATCTTCAGGCTTCCATTTTTGCAGCCACACTGAACCACACATCTGGTTTCCATAGTGATAGTGTGTAATTTCTGATTATCAGATTATGCCCAGTTTTCAGTTTTCAAAACAGTTTTCAAAACTCTGGTGATTGTGAGATGTAAAGAGGTGCTATGGTGGTCATGCAAGTAATACGTAATATGAATCAATACACAGAACTCTATCGGATTCACTTTGTGTGTGTTAGTGCTCTGAAAATAGCAATATTAAACTGTCCCCAGAATAACCCTGTAGGCTTCAACTCAGTTTTAAGACAAGTACTACTTCCTATGCCAGGTACTTAACTTATGGTTAAACACAGACTGCATTCAAAGTGACCTGAAAAACAGGTCATGATCTTTGAGAGTGGGCTTCCTTTTTGGTTTGGTAGTAGTGAGAGGAAATGGACGGTGGGAGTAGATATTtattgtttaggttttttttgttgttgttgttggttttttttttttttgtttttttgtttttgcatttttatggATGCCCTACTGTGTGTAGTTGTCATAGTAGGTGGAAGATGATAAATATGTTTTATCTGCTACTAATGTGAAAGTAACTTAAATAGCAAAACCCAGCTTTTCCTGTCCCTCCATTTCTCTCAGAAATGCAGTTTGGACTTTCCTTCTGGAAATGATGAGATCGCATGGAGGTTTTCTAGATGTTAGGTAGACCCAAATAAAAGCTCTCAGAGTCCTCTTTGGGTAAATATAAGACCTCTTGTAGCTACAACCTTTTAGAGCATGTTTCATCTGCATTTTTACTACTTTGAACTGAATGGTAGTCTTTTTTAGAAGACTGATGTCAGCCTGCCAGGTACTGTAATTCATTCTATcctattatattatatatcaagTAGGACAGTGAAAAATGTTTCCTTGCAGACTTGTAGTCCAGTTtcagtttcttctatttttatcCTTAATAACCACTGCAAATCAGTGTAAGGGTTTTTCTGGTAATTACAGCACTTTGTTAAAAGTTTGCAATTTTGTCAGCCATTAATAATACCTTTCTGTGAAGAAACCTTACTAAGTTAACCATTACTGGCTGAGTGGGATGTGAATGGAATGTTAGAAATGTTGTGTGAATTGAAGTTCTGTATTCATTATAGATATAGCCCTTATTTAAAACAGTGAAGTCCATATTCAGACTAGGAATGAAAGTAAGGTATTTCTCAGTTTGTGCAAAAGTGGAGCTTTACTTTGTTTATTTGAAAAGCAGGAAAAATTATAGCAATCTGTCATTTTACCTTAAATGGACAAGCCTGGGCATCACAAGTACTTCCAGGCTTCCCTGGGATATACCAAGACATGGAGTTCAATTTTGCTTTTCTGTGGTTGTGAGTATAGATGCTGGAATTGGGGTTTGACGGTGTGATGGCTGCTGACAAGAAGCCAGAACTCCCATTCCTGAGGGACTTGAGACTGAGGACCACGTTTCATCTCCCTTCATGCCGTGTTCTGTCTCCTCTGTCCAAGTTGACTAAGGATGTTCTTGGTTGTTTGGTTTCAGTTGGTGCTCTGAAGCTGAATCTCAGTGCCCTTTACTCGCAGTTGTCAAATTTTGATAAAACGTGCCATTTTCTTTGGTAAGAGAAAGCAGGTCTAATGTCTGCCAGAACACAATTTATATGCCGAATTATTGGCTccattaaactttttaaaaactttagcaCTGGTTACTTTTTTCCATTGCATTCAATATGTAGCACCTCCTCACCTCATGAGTAGCGCTTCCTTCCCTACTGCCGctcctgtcccttcctccctggCCTGCCAGAGTAGAAGAACTGAGACCGGCCCATCAGTACAAAGGGAGGTGGTTTTTAATCTTAGCGTGAGTTAGTCTGATGAAGTTCAGAATCTTTTGGAAGTTTTTATTAGTTAAGATGCAGAACATCAAAGATGACCACATACTAGTGTAGTATTAGGCACTGACTTTgacttttttactttctttttttttttttggacaggtcTTTTTGTGTAGTTCATGCTGACTTCTAGCATTCGATCCTCCTGTTTCAGTTGCCTAAGTGCTATGGTTTACTGGCATGGTGCTTGCTTGGCCTTTTCAGCCGATCAAGAACAGAATGGGCTGCTCTTGAAGCTAAGCACTTGAGTATGGGAGAACAGAGTCTTTGTCATGAGCCAGAGTCTGATTCTTAACACAGTGTATCTCCTTAGTTCTGTCATTAACCTGACGGGGGTAGGCCAGGCTGAGTTCTCCACTGCAGTGTCCTGAACGTAGCTGAGAGGCTCACGAACTTTTATTacaatttttaatatcttttacaGCAAATTTCGAGTATCATCAATGTAGTTTACCTCATTGAAGTAATGACATACACCTTAAACCATAATACAAATAAATCATTGAAAATGCCAAAAAGAC |
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