| Retrocopy Name | PAPOLAP1 |
|
| Species | Rhinopithecus roxellana | |
| Coordinates | chr6:102663046-102665617 UCSC | |
| Strand | - | |
| Parental Sequence | XM_010353680.2 | |
| Parental seq. overlap | 2172 bp | |
| Parental seq. overlap (%) | 49% | |
| Genomic Region |
Intergenic |
|
| Retrocopy Summary | PAPOLAP1, located on chr6:102663046-102665617, is a retrocopy of the parental gene PAPOLA. Retrocopies of protein-coding genes, also known as processed pseudogenes, are intriguing genomic elements with implications in genome evolution and diseases. While some retrocopies are non-functional, there are examples of retrocopies (retrogenes) acquiring regulatory roles or exhibiting neofunctionalization unrelated to their parental genes. |
| Gene Name | PAPOLA |
| Full Name | N/A |
| Also known as | PAPOLA |
| Coordinate | chr5:155046331-155112545 |
| Strand | + |
| Gene summary | N/A |
| >PAPOLAP1 |
| CCCTTCGGGGTCTTCGAAGAGGAAGAGGAACTGCAGCGCAGGATTTTagttttggaaaaattaaataatctggtAAAGGAATGGATACGTGAAATCAGTGAAAGCAAGAGCCTTCCCCAGTCTGTAATTGAAAACGTTGGCGGAAAGATTTTTACGTTTGGCTCTTACAGATTAGGAGTACATACGAAAGGTGCAGATATTGACGCCTTGTGCGTTGCACCAAGGCATGTGGATCGAAGCGACTTTTTCACCTCATTCTATGTTAAACTGAAACTACAGGAGGAAGTAAAAGATTTAAGGGCTGTTGAGGAGGCATTTGTGCCAGTTATCAAACTGTGTTTTGATGGGATAGAGATTGATATTTTATTTGCAAGATTAGCACTACAGACTATTCCCGAAGATTTGGACCTAAGAGATGACAGTTTGCTTAAAAATTTAGACATTAGATGCATAAGAAGCCTTAACGGTTGCCGGGTAACTGATGAAATTTTACATCTAGTGCCAAACATTGACAACTTCAGGTTGACTCTAAGAGCCATCAAACTGTGGGCCAAGTGCCACAATATCTATTCCAATATATTAGGTTTCCTCGGAGGTGTTTCCTGGGCCATGCTGGTAGCAAGAACTTGTCAGCTTTATCCAAATGCAGTAGCGTCAACTCTCGTGCGGAAATTCTTCTTGGTATTTTCGGAATGGGAATGGCCAAACCCAGTGTTACTGAAAGAGCCTGAAGAACGGAATCTTAATTTGCCTGTATGGGACCCAAGAGTAAATCCCAGTGATAGGTACCATCTTATGCCCATCATCACACCAGCATACCCACAGCAGAACTCCACATACAACGTGTCTGTTTCAACCAGGATGGTCATGATTGAGGAGTTTAAACAGGGACTTGCTATCACACACGAGATTTTGCTGAGTAAGGCTGAGTGGTCCAAACTCTTTGAAGCTCCAAGCTTCTTTCAGAAGTACAAGCATTATATTGTACTTCTGGCAAGTGCACCAACAGAAAAACAGCATTTAGAATGGGTGGGCTTGGTGGAATCAAAGATCCGAATCCTGGTTGGGAGCTTGGAGAAGAATGAATTTATTACACTGGCACATGTGAATCCACAGTCATTTCCAGCACCCAAAGAAAATCCTGATATGGAAGAATTTCGTACAATGTGGGTGATTGGGTTAGTGCTAAAAAAGCCAGAAAACTCTGAAATTCTCAGTATTGATCTCACCTATGATATCCAGTCTTTCACAGATACTGTTTATAGGCAAGCAATGAATAGTAAGATGTTTGAGATGGGTATGAAAATTACTGCAATGCATTTAAGAAGAAAGGAGCTTCACCAGCTGCTGCCTCATCATGTGCTTCAGGACAAGAAAGCACACGCAACAGAAGGTAGAAGATTGACAGATCTAAACGACAGCAGCTTTGACTTGTCTGCAGGCTGTGAAAACAGCATGTCTGTGCCTTCATCTACTAGCACTATGAAGACAGGCCCATTGATTAGCAGTTCTCAGGGTAGAAATAGTCCTGCCCTGGCTGTAATGACAGCATCGATGGCTAACGTACAGGCTACTGAAATTTCCTTGCCACAGATGAATACCAGTGAAAGTTCAGGGGTTGCGTTAAATGAAAGTATTCCTCACGCTGTCTCTCAGCCTGCCATTTCTCCATCACCAAAGGCCATGGTCGCCAGAGTTGTTTCTTCGACATGTCTCATAAGCCATCCAGACCTTCAGGAAACGCAGCAACAAACATATCTAATCCTATAGTTGGAGTCTAGAGGATATTCTTGCCTCATGAACTCCATTAGAAAAATTCAGACAGCATCTTCTCTGTTGGCCTCTCAGGTAACATCAGTATAGATCTTTCCAGTATCCCCATTCTCCCTGCAAATCTAGTTCCTGTTATCAAGAATTCAGTAAAAAAGGTTGAATGGTTAAAAACAACGTCAGGCGTCCATGCACAATATCTGCCAACTCAACCTGTCGTCTTCAAATACTAAAGGAGAATGAAGGGTACAGGACTGGATATGACTTGAAATAGATTGAGGCTTATTTGGTAACTTCCTTTACTGGGCCAGTCTTGATCAGAAGTCCACATTAGTATGTGACAGCTAGAGGTACTGTTATTAATGTGTCAGCAACAGTTACATTAACTATTTCAAAGGACTACtgcccttaaaaagaaaaaaacctttcagCTATATTTGTACCTGTGACTGACATCTGGACTGGATTTATATTGATGATTTGTTGGGAAAATTTGCAATACAAACTGGTATCAGAATTCCTTACACTGATGATgcactttatattttctattagaAAGTAGaactaattttagatttttcaaatTGGTGAATTTTATCTTTCCCTGAAGAGGTTTGTTCACTATTAATGTTAAAATTGGCTACCATTGTGCAGTGGTGTACTATATTTCAGAGAAAGCATAAAAGTACATCTAGCTCTGTCCCTATGAGGTAGTTGTAACCCTTTAAAATGAAATGTCAACTT |
| >XM_010353680.2 |
| TTCTAGAACGTTGCTGTGGTAGCGCTCGGGCGCCATGTTAGGacgaaggggaaggaggagaagcgCTTAAAGCGGCGGGAGCGGTGCGGGAGAGGGGTTGGACCCAGGGCTGAGGCAGGCCCCCCCTCCCTCCCGCCTCAGTGGATCATGCCCAGGGCGGCAGTGGCGGCGGTTGCGGGGGGGAAGTGACTGGGCGGTGCCGGCGCAGGAGACGATGCCGTTTCCAGTTACAACACAGGGATCACAACAAACACAGCCGCCACAGAAGCACTATGGCATTACTTCTCCTATCAGCTTAGCAGCCCCCAAGGAGACTGACTGCATACTTACACAGAAACTAATTGAGACATTGAAACCCTTTGGGGTTtttgaagaggaagaggaactgCAGCGCAGGATTTTAATTTTGGGAAAACTAAATAACCTGGTAAAAGAGTGGATACGAGAAATCAGTGAAAGCAAGAATCTTCCACAATCTGTAATTGAAAATGTTGGAGGAAAAATTTTTACATTTGGATCTTACAGATTAGGAGTGCATACAAAAGgtGCTGATATTGATGCGTTGTGTGTTGCACCAAGACATGTTGATCGAAGTGACTTTTTCACCTCATTCTATGATAAGTTGAAATTACAGGAAGAAGTAAAAGATTTAAGAGCTGTTGAAGAGGCATTCGTACCAGTTATTAAACTCTGTTTTGATGGGATAGAGATTGATATTTTGTTTGCAAGATTAGCACTGCAGACAATTCCAGAAGATTTGGATCTACGAGATGACAGTCTGcttaaaaatttagatataagATGTATAAGAAGTCTTAACGGTTGCAGGGTAACCGATGAAATTTTACATCTAGTACCAAACATTGACAACTTCAGGTTAACTCTGAGAGCTATCAAACTATGGGCCAAACGCCACAACATCTATTCCAATATATTAGGTTTCCTCGGTGGTGTTTCCTGGGCTATGCTAGTAGCAAGAACTTGCCAGCTTTATCCAAATGCAATAGCATCAACTCTTGTACATAAATTTTTCTTGGTATTTTCTAAATGGGAATGGCCAAATCCAGTGCTATTGAAACAGCCTGAAGAATGCAATCTTAATTTGCCTGTATGGGACCCAAGGGTAAACCCCAGTGATAGGTACCATCTTATGCCTATAATTACACCAGCATACCCACAACAGAACTCCACGTACAATGTGTCCGTTTCAACACGGATGGTCATGGTTGAGGAGTTTAAACAAGgTCTTGCTATCACAGATGAAATTTTGCTGAGTAAGGCAGAGTGGTCCAAACTTTTTGAAGCTCCAAACTTCTTTCAAAAGTACAAGCATTATATTGTACTTCTAGCAAGTGCACCAACAGAAAAACAACGCCTAGAATGGGTGGGCTTGGTGGAATCAAAAATCCGAATCCTGGTTGGAAGCTTGGAGAAGAATGAATTTATTACACTGGCTCATGTGAATCCCCAGTCATTTCCAGCACCCAAAGAAAATCCCGACAAGGAAGAATTTCGCACGATGTGGGTGATTGGGTTAgtgtttaaaaaaacagaaaactctgAAAACCTCAGTGTTGATCTCACCTATGATATTCAGTCTTTCACAGATACAGTTTATAGGCAAGCAATAAACAGCAAGATGTTTGAGGTGGATATGAAAATTGCTGCAATGCATGTAAAAAGAAAGCAACTCCATCAACTACTACCTAATCATGtgcttcagaaaaagaaaaagCATTCAACAGAAGGTGTCAAATTGACAGCTCTCAATGACAGCAGCCTTGACTTGTCTATGGACAGTGATAACAGCATGTCTGTGCCTTCACCTACTAGTGCTACGAAGACCAGTCCATTGAACAGTTCTGGCAGCTCTCAGGGcagaaacagtcCTGCTCCAGCTGTAACAGCAGCATCTGTGACCAACATACAGGCTACTGAAGTTTCTGTGCCACAAGTAAATTCCAGTGAAAGCTCAGGGGGTACATCGAGTGAAAGCATTCCTCAAACTGCCACACAACCAGCCATTTCTCCACCACCAAAGCCTACGGTCTCCAGAGTTGTTTCTTCAACACGTCTGGTAAACCCACCACCTAGATCTTCAGGAAACGcagcaaattcaggaaatgcagcaACAAAAATACCTACTCCTATAGTAGGAGTCAAGAGGACATCCTCACCTCATAAAGAAGAGAGTCCcaagaaaaccaaaacagaagagGAACAACTTGATACAGAGACAAGTACAACTCAATCAGAAACTATTCAGACAGCGGCTTCTCTGTTGGCCTCTCAGaaaacatccAGTACAGACCTTTCTGATATCCCTGCTCTCCCTGCAAATCCTATTCCTGTTATCAAGAATTCAATAAAACTGAGATTGAATCGGTAAAAACAACCTCAGGGGTCCATAAACAATATCTGCCAACTCAACCTGTTGTCTTCAAATGCTAAAAAAGGAGAATGGAGGGTACAAGACTAGACATGACTGAAATGGATTTGGGTTTTTTGGTGACCTCCCTTACTGGGCTAATCAGCACTTGATCGGAAGTCCAGGTTAGTATGTGAAGCCAGGagtactattattattgtgttaGCAACAGTTGCATTAACTATTTCAAAAATTactgcctttaaaaaaacaacCTCAAGCTATATTTGTATTCATAATTGACATCTGGATTGGGTTTATGTTTGATGCattgtttggaaaatttgcaataCAAACTGGCATAAGAATTACTTATTCTGATGATgcacttttatgtatttttcattagAAAGTAGAACTAATTTTAGAGTTTCAGCTTGatggattttccttttttcctgaagaattttctttaccATTAGTCTTCAAATTGGATACCGTTGTGCAGTGGTGTACTGTTATACTTCAGAGAAAGGGTAAGAGTACATCTAGTTCAGTTCCTGTGAGGTAGCTGTAACCCTTAAAAATGAAACGTCAACTCTAGGGTACATTTGACATTGAAAGATTAGTTAGGAAATAACTTGGTTTTGATAGGGTCATGATTAAGAAATGATATATTGGTTTTATTTATGGAATTGTTTTATAGTGCATACAAATCAGTGATCAgccagcaaatatttttctttgagctTATGAAAGCTCTGTATTCTTTTGCCTTCAATCTGTtgtcttcaaaacaaacaaacaaacaaaaagcttcttgcgccttccccttcctttttctttttgcttgtatGCACAAGGTAGGACTTACTTCGTAAGAAACAAAATGCCAGTATTTTCTTAAGCCATGATGTGAAACCAATGACCCTGTGACCACGTGGCACAGAACACTAAATTTTGGTCCCATGGCTGAAACTTGAGGGTGACTAAAAGTAATGCCTGTGAAACATGGTATCTGTCTGGGATGGCCATTTGATCTCTAGGAGGAATTTTGTACACTCCACAGAACTCCTATCTATAGTaaaattgattttcagttttaaatgtgGGCAAAAAGGCATTTTCTCCAAGATTTTAAAActgattcttatttttaaatggtttaccAAAATTTGTCAGTACATTTTACATgtagaagcattttaaaaatcatttctagcAAGCACTTGACATCTAGTCAGCTCTCTActccttctttattttgtttttttcaaaagattAAGAGCTCCtttctttgaataaaataatttctcataATTAAGCAGTAGAAGATCTATCTTTACAAAGTATGAGGGATGCCAGATGTTGATAAACTTACTCTTTCTTAATCTGGACAAAGTAAACTTAACAGATTTTTCTGATGAGCATGTTTTATGAATCCTCCATTGTGCTCCATTCTATCACATGTGCATTTTTCATGTTAAACTGCAATTACTTAATCTCTTCCCCTATCCTTCTAAATTAATTTTCTGAAGTTGGAGTGTAGTCTTTTTCCCCTTAGGCTATGCATTAATCGAAGCTTTCTTTTCACCATGATTTATAATGTCTAGTAAACAATATTTCTACTTCCCACATCTTTGCTTTACACAGTCACCTTGCCCTTCCTTCCACCACCGAAGAAAAAAGCTGGTCATACTAACAGGTGAAGTGTACAAGGTGTCTGTGTGTTTTGTGTAGCTTCAGAGTTAGATTGAAATTACCAGGCACAGATTTAGTCTTGTCATTTTGTTTACACATTGGGGAAAACAATTCAGTTTATTAAACGTTTCATGTAACTGCACCCAAGTTTTGCCAAGCTGGAAACTTGGACCTTTTCTGTGTagtgactttttaattatagttTTCATAACCTGGAGATCAGACTGTTGCTTTCGCATGATGTATGTAGTGTCTCATGACTGgagtttgctttgttttatagTATCTGTACTCCTTGTATTTTTCAAGAGCTATTTTGTAAACAGATGATGTATTTCTCCAttgaaaacacaa |
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