Retrocopy Name | PAPOLAP1 |
|
Species | Pipistrellus kuhlii | |
Coordinates | scaffold_m20_p_8:1185096-1185283 UCSC | |
Strand | - | |
Parental Sequence | PAPOLA_x2 | |
Parental seq. overlap | 163 bp | |
Parental seq. overlap (%) | 8.1% | |
Genomic Region |
Intragenic (RADIL) |
|
Retrocopy Summary | PAPOLAP1, located on scaffold_m20_p_8:1185096-1185283, is a retrocopy of the parental gene PAPOLA. Retrocopies of protein-coding genes, also known as processed pseudogenes, are intriguing genomic elements with implications in genome evolution and diseases. While some retrocopies are non-functional, there are examples of retrocopies (retrogenes) acquiring regulatory roles or exhibiting neofunctionalization unrelated to their parental genes. |
Gene Name | PAPOLA |
Full Name | N/A |
Also known as | NULL |
Coordinate | scaffold_m20_p_65:7687-54311 |
Strand | + |
Gene summary | N/A |
>PAPOLAP1 |
TTCAGACGGCAGCTTCGCTGTTGGCCTGGCAGGAGACATCCAGTAGCAACCTTTCCAATACCCCTGCTCTCCCTGCACATCCTATTCCTGTTAACAAGACTTCAATAAAACAGATTGAACTGATCAAAACAACCTCAAGCTTCCATAAATAATATCTGCCAACTCGATCTGTTGTCTTCAATGCTAAA |
>PAPOLA_x2 |
ACAGGAAGAAGTAAAAGATTTACGAGCTGTTGAAGAGGCATTTGTGCCAGTTATCAAACTGTGTTTTGATGGGATAGAGattgatattttatttGCAAGATTAGCACTGCAGACTATTCCAGAAGACTTGGATTTACGAGATGACAGTCTGCTTAAAAATCTAGATATAAGATGCATAAGAAGTCTTAACGGTTGCAGGGTAACCGATGAAATTTTACACCTAGTACCAAACATTGACAACTTCAGGTTAACTCTGAGAGCTATCAAACTGTGGGCCAAACGCCACAACATCTATTCCAATATATTAGGTTTCCTCGGTGGTGTTTCCTGGGCTATGCTAGTAGCAAGAACTTGCCAGCTTTACCCAAATGCAATAGCATCAACTCTTGTACATAAATTTTTCTTGGTATTTTCTAAATGGGAATGGCCAAATCCAGTGCTATTGAAACAGCCTGAAGAATGCAATCTTAATTTGCCTGTATGGGACCCAAGGGTAAACCCCAGTGATAGGTACCATCTTATGCCTATAATTACACCAGCATACCCACAACAGAACTCCACGTACAATGTGTCCGTTTCAACACGGATGGTCATGGTTGAGGAGTTTAAACAAGGTCTTGCTATCACAGATGAAATTTTGCTGAGTAAGGGAGAGTGGTCCAAACTTTTTGAAGCTCCAAACTTCTTTCAAAAGTACAAGCATTATATTGTACTTCTAGCAAGTGCACCAACAGAAAAACAACGCCTAGAATGGGTGGGGTTGGTGGAATCGAAAATCCGAATCTTGGTTGGAAGTTTGGAGAAGAATGAATTTATTACACTGGCTCATGTGAATCCCCAGTCATTTCCAGCACCCAAAGAGAATCCTGACAAGGAAGAATTTCGCACAATGTGGGTGATTGGATTAGTGTTTAAAAAAACTGAAAACTCTGAAAATCTCAGTGTTGATCTCACCTATGATATTCAGTCCTTCACAGATACAGTTTATAGGCAAGCAATAAACAGCAAGATGTTTGAGGTGGACATGAAAATTGCTGCAATGCATGTAAAAAGAAAGCAACTCCATGAACTACTACCTAATCATGTGCTTCAGAAAAAGAAAAAGCATTCAACAGAAGGTGTCAGGTTGACACCTCTGAATGAGAACAGCCTCGACTTGTCTATGGACAGTGATAACAGCATGTCTGTGCCTTCACCTACCAGTGCTATGAAGACCAGTCCGTTGAACAGTTCTGGCAGCTCTCAGGGCAGAAACAGTCCTGCTCCAGCTGTGACAGCAGCATCTGTGACCAACGTCCAGGCCGGCGACGTTCCTGCTCCACAAGCGGATTCCAGTGAAAGCTCAGGGGGCAAGGGAATTGGTTTGACAGGTACATCGAGCGAAAGCATTCCTCAAACTGCCACACAGCCAGCCATTTCATCACCACCAAAGCCTGCGGTCTCCAGAGTGGTTTCTGCAACACGCCTGGTCAACCCACCACCACGACCTTCAGGAAATGCAGCAACAAAAATACCTAATTCCACTGGAGGCATCAAGAGGAGATCCTCACCTCACAGAGAAGAAAGTCCCAAGAAAACCAAAACGGAAGAGGAACAAGCTGATACAGAGACAAGTACAACTCAATCAGAAACTGTTCAGACGGCGGCTTCTCTGTTGGCTTCTCAGAAAACATCCAGTACAGACCTTTCTGATATCCCTGCTCTCCCTGCAAATCCTATTCCTGTTATCAAGAATTCAATAAAACTGAGATTGAATCGGTAAAAACAACCTCAGGGGTCCATAAACAATATCTGCCAACTCAACCTGTTGTCTTCAAATGCTAAGAAAGGAGACTGGAGGGTACAAGACTAGACATGGCTGAACATGGATATAGGTTTGTGTGACCTCCCTTACTGGGCTAATCAGCACTTGATCGGAAGTCCAGGTTAGTATGTGAAGCCAGGAGTACTATTATTACTGTGTTAGCAACAGTTGCATTAATATTTTAAAAAATTACTGCCTTT |
PMID - Link | Title |
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