| Retrocopy Name | PAPOLAP1 |
|
| Species | Equus caballus | |
| Coordinates | chr13:3999596-4001341 UCSC | |
| Strand | - | |
| Parental Sequence | XM_023628354.1 | |
| Parental seq. overlap | 1486 bp | |
| Parental seq. overlap (%) | 33.5% | |
| Genomic Region |
Intergenic |
|
| Retrocopy Summary | PAPOLAP1, located on chr13:3999596-4001341, is a retrocopy of the parental gene PAPOLA. Retrocopies of protein-coding genes, also known as processed pseudogenes, are intriguing genomic elements with implications in genome evolution and diseases. While some retrocopies are non-functional, there are examples of retrocopies (retrogenes) acquiring regulatory roles or exhibiting neofunctionalization unrelated to their parental genes. |
| Gene Name | PAPOLA |
| Full Name | poly(A) polymerase alpha |
| Also known as | - |
| Coordinate | chr24:39325273-39382576 |
| Strand | + |
| Gene summary | N/A |
| >PAPOLAP1 |
| GAGGCGTTTGTTCCCGTCATCAAACTGTGTTTTGATGGGATCGAGATTGACATTTTGTTTGCAAGATTAGCACTGCAGACGATTCCAGAAGATTTGGACCTAAGAGACGATAGTCTGCTTAAAAATTTAGACATTCGATGCATAAGAAGTCTTAACGGCTGCCGAGTCACTGATGAAATCTTACACCTCGTCCCCAACATCGACAACTTCAGGTTGACTCTAAGAGCCATCAAATTGTGGGCCAAGTGCCACAACATCTATTCCAATATATTAGGTTTCCTAGGAGGGGTTTCCTGGGCCATGCTAGTGGCGAGGACTTGCCAGCTTTATCCAAACGCCATAGCATCCACCCTTGTACGTAAATTTTTCTTGGTGTTTTCTGAATGGGAGTGGCCAAACCCAGTGCTGCTCAAAGAGCCGGAAGAGCGGAATCTTAATTTGCCTGTGTGGGACCCAAGGGTAAATCCCAGTGACAGGTACCATCTTATGCCTATAATCACACCAGCGTACCCACAGCAGAACTCCACCTACAACGTGTCTGTTTCCACAAGGATGGTCATGGTCGAGGAGTTTAAACAGGGGCTTGCTATCACACATGAAATCTTGCTGAGTAGGGCCGAGTGGTCCAAACTTTTTGAAGCACCCAGCTTCTTCCAAAAGTACAAGCACTACATTGTACTTCTAGCGAGCGCACCAACTGAAAAACAGCATCTGGAGTGGGTGGGCTTGGTGGAATCAAAAATCCGAATCCTGGTGGGAAGCTTGGAGAAGAATGAATTTATCACACTGGCGCACGTGAATCCTCAGTCGTTTCCAGCACCCAAAGAAAATCCCGACAAGGAAGAATTTCGTACAATGTGGGTGATTGGGTTAGTATTAAAGAAACCAGAAAACTCTGATGTTCTCAGTATTGATCTCACCTATGACATCCAGTCTTTCACAGACACGGTTTATAGGCAAGCTATAAATAGCAAGATGTTTGAGATGGATATGAAGATTGCTGCGATGCATTTAAAAAGAAAGGAACTTCATCAGCTGCTCCCTAATCATGAGCTTCAGCAAAAGAAAACACAGTCGGCAGAAGGTGTCACGTTGACAGCTTTGAGTGACGACAGCCTCGACTTGACCGCAGACAGTGAAAACAGCATGTCTGTGCCTTCACCTCCTAGCACTGTGAAGACTGGCCCAGTGAGTGGCAGCTCTCAGGGCAGAAACAGTCCTACCTTGGCTGTAATGGCAGCGCCTGTGAGCAGCGTGCAGGTTACTGACGTTTCCTTGCCACAGGTGTATCCCAGTGACAGCTCCGGGGGTACGCCGAGTGAAAGCGTTGCTCAGACTGCCTCTCACCCAGCTGTTTCTCCGCCCCCAAAGCCCACGGTCACCAGAGTCGTTTCTTCAGCCTGTCTGGTGAACCATCCACCCAGGCCTTCAGGGAGTGCAGCCGCAAACATAGCTAACCCTATAGTAGGAGTCTAGGGGACATTCTCATCTCATACGGAGAAAGGACCAAGGACACCAAAACAGAAGAGGAACAGTCTCATAAAGGGACAAGCACAACCCAATTAGAAACTCCACGGAGCAGCTTCTCTGTTGGCCTCGTGGGAAACGTCCAGGGCAGACCTTTCCAGTAGCCCTGCTCATCCTGTTCCTGTTGTCAGGAATTCAATAAAGCAGAGTGAACTGATGAAAACAACTTTGAGGGTTCATAAACAGTATCTGCCAGCTCAACCTGTCGTCTTCAAATGT |
| >XM_023628354.1 |
| GTTGCTGTGGTAGCGCTCGGGCGCCATGTTAGGACGAAGGGGAAGGAGGAGAAGCGCTTAAAGCGGCGGGAGCGGGCGCGGGAGTGGGGTTGGACCCAGGGCTGAGGCAGGCCCCCCCCTCCCTCCCGCCTCAGTGGATCATGCCCAGggcggcagcggcggcggttgcgggggggaagtgactgggcggtgccggcgCAGGAGACGATGCCGTTTCCAGTTACAACGCAGGGATCACAACAAACACAGCCGCCACAGAAGCATTATGGCATTACCTCTCCTATCAGCTTAGCAGCCCCCAAGGAGACTGACTGCCTGCTTACACAGAAACTCATTGAGACTCTGAAGCCCTTTGGGGTTTTTGAAGAGGAAGAGGAACTGCAGCGCAGGATTTTAATTTTGGGAAAATTAAATAACCTGGTAAAAGAGTGGATACGAGAAATCAGTGAAAGCAAGAATCTTCCACAATCTGTAATTGAAAATGTTGGAGGAAAAATTTTTACGTTTGGATCTTACAGATTAGGAGTACATACAAAAGGTGCCGATATTGATGCGTTGTGTGTTGCACCAAGACATGTTGATCGAAGTGACTTTTTCACCTCATTCTATGATAAGTTGAAATTACAGGAAGAAGTAAAAGATTTAAGAGCTGTTGAAGAGGCATTTGTACCAGTTATCAAACTGTGTTTTGATGGGATAGAGattgatattttgtttGCAAGATTAGCACTGCAGACTATTCCAGAAGACTTGGACTTAAGAGATGACAGTCTGCTTAAAAATTTAGATATAAGATGCATAAGAAGTCTTAACGGTTGCAGGGTAACCGATGAAATTTTACATCTAGTACCAAACATTGACAACTTCAGGTTAACTCTGAGAGCTATCAAACTGTGGGCCAAACGCCACAACATCTATTCCAATATATTAGGTTTCCTCGGTGGTGTTTCCTGGGCTATGCTAGTAGCAAGAACTTGCCAGCTTTATCCAAATGCAATAGCATCAACTCTTGTACATAAATTTTTCTTGGTATTTTCTAAATGGGAATGGCCAAATCCAGTGCTATTGAAACAGCCTGAAGAATGCAATCTTAATTTGCCTGTATGGGACCCAAGGGTAAACCCCAGTGATAGGTACCATCTTATGCCTATAATTACACCAGCATACCCACAACAGAACTCCACGTACAATGTGTCCGTTTCAACACGGATGGTCATGGTTGAGGAGTTTAAACAAGGTCTTGCTATCACAGATGAAATTTTGCTGAGTAAGGCAGAGTGGTCCAAACTTTTTGAAGCTCCAAACTTCTTTCAAAAGTACAAGCATTATATTGTACTTCTAGCAAGTGCACCAACAGAAAAACAACGCCTAGAATGGGTGGGCTTGGTGGAGTCAAAAATCCGAATCCTGGTTGGAAGTTTGGAGAAGAATGAATTTATTACACTGGCTCATGTGAATCCCCAGTCATTTCCAGCACCCAAAGAAAATCCTGACAAGGAAGAATTTCGCACGATGTGGGTGATTGGGTTAGTGTTTAAGAAAACAGAAAACTCTGAAAATCTCAGTGTTGATCTCACCTATGATATTCAGTCTTTCACAGATACAGTTTATAGGCAAGCAATAAACAGCAAGATGTTTGAGGTGGACATGAAAATTGCTGCAATGCATGTAAAAAGAAAGCAACTCCATCAACTACTACCTAATCATGTGCTTCAGAAAAAGAAAAAGCATTCAACGGAAGGTGTCAGATTGACACCTCTAAATGACAGCAGCCTCGACTTGTCTATGGACAGTGATAACAGCATGTCTGTGCCTTCACCTACTAGTGCTATGAAGACCAGTCCATTGAACAGTTCTGGCAGCTCTCAGGGCAGAAACAGTCCTGCTCCAGCTGTAACAGCAGCATCTGTGACCAACATACAGGCTACTGAAGTTTCTGTGCCACAAGTAAATTCCAGTGAAAGCTCAGGGGGTACATCGAGTGAAAGCATTCCTCAAACTGCCACACAACCAGCCATTTCACCACCACCAAAGCCTACGGTCTCCAGAGTTGTTTCTTCAACACGTCTGGTAAACCCACCACCTAGACCTTCAGGAAATGCAGCAACAAAAATACCTAATCCTATAGTAGGAGTCAAGAGGACATCCTCACCTCATAAAGAAGAGAGTCCCAAGAAAACCAAAACAGAAGAGGAACAACTTGATACAGAGACAAGTACAACTCAATCAGAAACTATTCAGACAGCGGCTTCTCTGTTGGCCTCTCAGAAAACATCCAGTACAGACCTTTCCGATATCCCTGCTCTCCCTGCAAATCCTATTCCTGTTATCAAGAATTCAATAAAACTGAGATTGAATCGGTAAAAACAACCTCAGGGGTCCATAAACAATATCTGCCAACTCCACCTGTTGTCTTCAAATGCTAAAAAAGGAGAATGGAGGGTACAAGACTAGACACGACTGAAAATGGATTTAGGTTTTTTGTGACCTCCCTTACTGGGCTAATCAGCACTTGATCGGAAGTCCAGGTTACAGGTTAGTATGTGAAGCCAGGAGTACTATTATTATTGTGTTAGCAACAGTTGCATTAACTATTTCAAAAAATTACTGCCTTTAAAAAAAAACCTCAAGCTATATTTGTATCCATAATTGACATCTGGATTGGGTTTATGTTTGATGCATTGTTGGAAAATTTGCAATACAAACTGGCATAAGAATTCCTTATTCTGATGATGCACTTTTATGTATTTTTTTTATTAGAAAGTAGAACTAATTTTAGATTTTCAACTTGATGGATTTTCATTTTTTCCTGAAGAGTTTTCTTTACCATTAGTCTTCGAATTGGATACCATTGTGCAGTGGTGTACTGTTAGACTTCAGAGAAGGGTAAGAGTACATCTAGTTCAGTCCTTATGGGGTAGCTGTGACCCTTCAAAATGAAATGTCAACTCCAGGGTATATATTTGACATTGAAAGAATAATTAGGAAATACTTGGTTTTGGTGGTGTCATGATTAAGAAATGATATTATTGGTTTTATTTATAGAATTGTTTTAGAGTGCATACAAATCAGCGATCAGCCAGCAGATACTTTTCTTTGAGCTTATTAAAGCTCCGTATTCTTTTGCTTTCAGTCTCTTGTCTTTGAAAAAACAAAGCTTTTTGCTCCCTCTCCCTTCTTTTTCCTTTTGCTTGTATTCATAAGGTAGGACTTATTTCATAAAACCCAAAATGCCAGTATTTTTTTAAGCCATGATGTGAAACCAGTGACCCTGTGGCCACATGGCACAGAACACTACATTTTGGTCCCATGGCTGGAACTTTAGGGTGACTAAAAGTAATGCGTGTGGAACATATCTATCTATCTTGGATGGCCATTTGACCTCTAAACATGAGGAATTTTGTACACTCCACAGAACTCCTGTCTCTAGTAAAGTTGATTTTCAATTTTAAACGTGGGCAAAAAGGCGTTTTCTCCAAGAATTTTAAACTGATTTTTATTTTTAAATGGTTGACCAAAATTTGTCAGTAAATTTTACATGTAGAAACATTTTAAAAATCATTTCTAGCAAGTACTTGACATCTAGTCAGCTCTCTACTTTTTCATTTTGTTTTATCCTATCGATAGATTAGGAACTCCTTTCTTTAAAGAAAATAATTCCTCATAATTAAGCAGCAGAACATCCATCTTTACAAAGTATGAGGGATGCCAGATGTTGATAAACTTAGTTATTGTTTCTTAATCTGGACAAAGCAAACCTAACAGATTTTTCTGATGAGCATGTTTTCTGAATCCTCCATTGTGCTCCATTCTATATCACATCTGTATTTTTCATGTTAAACTGCAATTACTTAAACTCTTCCCCTGTCCTTCTAAATTAATTTTCCAAAGTTGGAGTGTAGTCTTTCCCCCTTAGGCTATGCATTAATTGAGGCTTTCTTTTCACCACACTTTAGAATGTCTGGTATACAATACTTCTACTTCCCACAGCTTTGCTCTGCACAGTCACCTTGCCTTTCCTCCCACCACCTAGGAAGAAAAGATGGTCATGCTAACAGGTGAAGTGTACAAGGTGTCTGTGTTTTGTGTAGCTTCAGAGTTAGATTAAAATTGCCAGGCACAGATTTAGTCTTGTCATTTTGTTTACACATTGGGGAAAAAAAAATTCTGTTTATTAAACGTTTCATGTAACTGCACCCAAGTTTTGCCAAGCTGGAAACTTGGACCTTTTTTGTGTAGTGACTTTTTAATTCTAGTTTTCATAACCTGGAGATCAGACTGTTGCTTTCGCATGATGTATGTAGTGTCTCATGACTGGAGTTTGCTTTGTTTTATAGTATCTGTACTCCTTGTATTTTTCAAGAGCTATTTTGTAAACAGATGATGTATTTCTCCATTGAAAACACAATAAAAAAAAAACAGCACAATCTCA |
| PMID - Link | Title |
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