| Retrocopy Name | PAPOLAP1 |
|
| Species | Ailuropoda melanoleuca | |
| Coordinates | chr10:3392379-3394898 UCSC | |
| Strand | - | |
| Parental Sequence | XM_011234827.3 | |
| Parental seq. overlap | 2197 bp | |
| Parental seq. overlap (%) | 50.5% | |
| Genomic Region |
Intergenic |
|
| Retrocopy Summary | PAPOLAP1, located on chr10:3392379-3394898, is a retrocopy of the parental gene PAPOLA. Retrocopies of protein-coding genes, also known as processed pseudogenes, are intriguing genomic elements with implications in genome evolution and diseases. While some retrocopies are non-functional, there are examples of retrocopies (retrogenes) acquiring regulatory roles or exhibiting neofunctionalization unrelated to their parental genes. |
| Gene Name | PAPOLA |
| Full Name | N/A |
| Also known as | - |
| Coordinate | chr14:34159052-34216468 |
| Strand | + |
| Gene summary | N/A |
| >PAPOLAP1 |
| gggatcacaacaGACGCCGCCGCCGCCCAAGCACTATGGCATCTCCTCCCCCATCAGCCTAGCAGCCCCCAAGGAGACTGACTGCATACTTACCCAGAAGTTAATTGAAACCCTGAAGCCCTTTGGGGTttttgaagaggaagaggaactgCAGCGCAggattttaattttggaaaaattaaataatctggtAAAGGAATGGATACGAGAAATCAGTGAAAGCAAGAGCCTTCCACAAACTGTAATTGAAAATGTTGGAGGGAAAATCTTTACATTTGGCTCTTACAGATTAGGAGTACATACGAAAGGTGCTGATATTGATGCGTTGTGCGTTGCACCGAGACATGTTGATCGAAGTGACTTTTTCACCTCGTTCTATGACAAATTGAAACTACACGAAGAAGTAAAAGATTTAAGGGCTGTTGAGGAGGCATTTGTACCAGTTATTAAACTGTGTTTTGATGGTATAGAGATTGATATTTTGTTTGCAAGATTGGCACTGCAGACTATTCCAGAAGATTTGGACCTAAGAGATGACAGTCTGCTTAAAAATTTAGATATTAGATGCATAAGAAGCCTAAACGGTTGCCGGGTGACAGATGAAATTTTACATCTAGTACCAAACATTGACAACTTCAGGTTAACTCTGAGAGCCATCAAACTATGGGCGAAATGCCACAATATCTATTCCAATATATTAGGGTTCCTAGGAGGTGTTTCCTGGGCGATGCTAGTAGCAAGAACTTGCCAGCTCTACCCAAATGCAATAGCATCAACTCTTGTACGTAAgtttttcttggtattttctgAATGGGAATGGCCAAATCCAGTGCTACTGAAAGAGCCTGAAGAGCGGAATCTTAATTTGCCCGTATGGGACCCAAGAGTAAATCCCAGTGATAGGTACCATCTTATGCCCATAATCACACCAGCGTACCCACAGCAGAACTCCACATACAATGTGTCTGTTTCAACAAGGATGGTCATGATTGAGGAGTTTAAACAAGGGCTTGCTATCACACATGAAATTTTGCTGAGTAAGGCAGAGTGGTCCAAACTTTTTGAAGCTCCAAGCTTCTTTCAAAAGTACAAGCATTATATTGTACTTCTAGCAAGTGCACCAACAGAAAAACAACATCTAGAATGGGTGGGCTTGGTGGAATCAAAAATCCGAATCCTGGTTGGAAGCTTGGAGAAGAATGAATTTATTACTCTGGCGCATGTGAATCCTCAGTCATTTCCAGCACCTAAAGAAAATCCTGACAAGGAAGAATTCCGTACGATGTGGGTGATTGGGTTAGTATTAAAAAAGCCAGAAAACTCTGACGTTCTCAGTATTGATCTCACCTATGATATCCAGTCTTTCACAGATACGGTTTACAGGCAAGCAATAAATAGCAAGATGTTTGAGATGGATATGAAAATTGCTGCAATGCATTTAAGGAGAAAGGAACTTCATCAACTATTGCCTAATCATGTGCTTCAGAAGTGGAAAACACATTCAATGGAAGGTGTCACTTTAACAGCTTTGAGTGACAGCAGCCTTGACTTGCCTGTGGACACTGAAGACAGCATGTCTGTGCCTTCACCTGCTAGCACTGTGAAGACCGGCCCAGTGACTGGCAGCTCTCAGGGCAGAAATAGTCCTGCTCCCGCAGCAATGGCAGCATCAGTGACTGCCGTACAAGTGACTGAGGTTTCCTTGCAACGAGTGAATCCCAGTGAAAGCTTAGGGGGTGCATTGAGTGAAAGCCTTCCTCAGACTGCCGCACAGCCAGCCCTTCTTCCACCATCAAAGGCCACAGTTGCCAGAGTTGTTTCTTCAACATGTCTGGTAAACCATCCACCCAGGCCTTCAGGGAGCACTGCAACAAACGTAGCGAATCCTATAGTGGGAGTCTAGCAGACGTTCTCACCTCATGAAGGACCAAGGAAACTCAAAGAAGAGGAACAATCTCATAAAGAGAAGACAATCCAGTACAGAACTTTCTAATATCCCGGCTCTCCCTGCAAATCCTGTTCCTGTTCCCAAGAATTCCGTAGGACAGATTGAACTGAAAAACAACCTCAAGGGTCCATAAACTATATCTGCCAACTCAACCTGTTGTCTTCAACTGCTAAAGGAGGAGAATGAAGGGTACCAAACTAGATTTGACTCAAGCTAGATTTAGCCTTATTTGGTAACTTCCTTTACTTTGGCTAATCTTGATCAGAAGTCCAGGTTAGTATATGATGCTAGAAGTACTATTATAAATCCGTCAGCCGCAGTTATAGTAACTATTTTAAAGGACTACTGcccataaagagaaaaacaagagaaaaaaaaaccctccagctATATTTGTACCCATGCCTGACATCTGGACTGGATTTATGTTTGATGCATTGTTGGGGAAAATTTACAATACAAACTGGTATCAGAATTCCTTATACTGATGATGGacttcatgtatatttttatcagAAAGTAGAActaattttaagtttttcagcttgatgaattttagttttttcctgaag |
| >XM_011234827.3 |
| gcTCCGCGGCCGTCGGGCCGGGGGCCTTCCCCTTCCAGAACGGCCGGGGGAATCTGAACCTTAGTGCTCCAGCTTCTCCGCCCCGtccgggggaaaaaaaaagaaaaagagaaaacaatgccCGGTGGCGGGGAAGGAAGGCCCCGTTCGTTGCGGGGTCTGCACACGGCGTTCAGTCCAGttacaacgcagggatcacaacAAACACAGCCGCCCCAGAAGCACTATGGCATTACCTCTCCTATCAGCTTAGCAGCCCCCAAGGAGACCGACTGCCTGCTTACACAGAAACTAATTGAGACTCTGAAGCCCTTTGGGGTttttgaagaggaagaggaactgCAGCGCAGGATTTTAattttgggaaaattaaataaCCTGGTAAAAGAGTGGATACGAGAAATCAGTGAAAGCAAGAATCTTCCACAATCTGTAATTGAAAATGTTGGAGgaaaaatttttacatttggaTCTTACAGATTAGGAGTACATACAAAAGgtgcTGATATTGATGCGTTGTGTGTTGCACCAAGACATGTTGATCGAAGTGACTTTTTCACCTCATTCTATGATAAGTTGAAATtacaggaagaagtaaaagattTAAGAGCTGTTGAAGAGGCATTTGTACCAGTTATCAAACTGTGTTTTGATGGGATAGAGatTGATATTTTGTTTGCAAGATTAGCACTGCAGACTATTCCAGAAGACTTGGACTTACGAGATGACAGTCTGCTTAAGAATTTAGATATAAGATGCATAAGAAGTCTTAACGGTTGCAGGGTAACCGATGAAATTTTACACCTAGTACCAAACATTGACAACTTCAGGTTAACTCTGAGAGCTATCAAACTGTGGGCCAAACGCCACAACATCTATTCCAATATATTAGGTTTCCTCGGTGGTGTTTCCTGGGCTATGCTAGTAGCAAGAACTTGCCAGCTTTATCCAAATGCAATAGCATCAACTCTTGTACATaaatttttcttggtattttctaAATGGGAATGGCCAAATCCAGTGCTATTGAAACAGCCTGAAGAATGCAATCTTAATTTGCCTGTATGGGACCCAAGGGTAAACCCCAGTGATAGGTACCATCTTATGCCTATTATTACACCAGCATACCCACAACAGAACTCCACGTACAATGTGTCCGTTTCAACACGGATGGTCATGGTTGAGGAGTTTAAACAAGgtCTTGCTATCACAGATGAAATTTTGCTGAGTAAGGCAGAGTGGTCCAAACTTTTTGAAGCTCCAAACTTCTTTCAAAAGTACAAGCATTATATTGTACTTCTAGCAAGTGCACCAACAGAAAAACAACGCCTGGAATGGGTGGGCTTGGTGGAATCAAAAATCCGAATCCTGGTTGGAAGTTTGGAGAAGAATGAATTTATTACACTGGCTCATGTGAATCCCCAGTCATTTCCAGCACCCAAAGAAAATCCTGACAAGGAAGAATTTCGCACGATGTGGGTGATTGGgttagtgtttaaaaaaacagaaaattctgaaaatctCAGTGTTGATCTCACCTATGATATTCAGTCTTTCACAGATACAGTTTATAGGCAAGCAATAAACAGCAAGATGTTTGAGGTGGACATGAAGATTGCTGCAATGCATGTAAAAAGAAAGCAACTTCATCAGCTACTACCTAATCATgttcttcagaaaaagaaaaagCATTCAACAGAAGGTGTCAGATTGACGCCTCTAAATGACAGCAGCCTCGATTTGTCTATGGACAGTGATAACAGCATGTCCGTGCCTTCACCTACTAGTGCTATGAAGACCAGTCCATTGAACAGTTCTGGCAGCTCTCAGGGcagaaacagTCCTGCTCCAGCTGTAACAGCAGCATCTGTGACCAACATACAGGCTACTGAAGTTTCTGTGCCACAAGTAAATTCCAGTGAAAGCTCAGGGGGTACATCGAGTGAAAGCATTCCTCAAACTGCCACACAACCAGCCATTTCACCACCACCAAAGCCTACAGTCTCCAGAGTTGTTTCTTCAACACGTCTGGTAAACCCACCACCTAGACCTTCAGGAAATGCAGCAACAAAAATACCTACTCCTATAGTAGGAGTCAAGAGGACATCCTCACCTCATAAAGAAGAGAGTCCtaagaaaaccaaaacagaagaGAAAACATCCAGTACAGACCTTTCTGATATCCCTGCTCTCCCTGCAAATCCTATTCCTGTTATCAAGAATTCAATAAAACTGAGATTGAATCGGTAAAAACAACCTCAGGGGTCCATAAACAATATCTGCCAACTCAACCTGTTGTCTTCAAATGCTAAAAAAAGGAGAATGGAGGGTACAAGACTAGACATGACTGAAAATGgatttaggttttttttgtgACCTCCCTTACTGGGCTAATCAGCACTTGATCGGAAGTCCAGGTTAGTATGTGAAGCCAGgagtactattattattgtgttaGCAACAGTTgcattaactatttaaaaaaattactgcctttaaaaaaaaaaaaaaaacacctcaagcTATATTTGTATCCATAATTGACATCTGGATTGGGTTTATGTTTGATGCATTGTTTGGAAAAATTTGCAATACAAACTGGCATAAGAATTCCTTGTTCGATGATgcacttttatgtatttttttattagaaagtagagctaattttagattttcagcttgatggattttcattttttcctgaaaaatttcCTTTACCATTAGTCTTCAAATTGGATACCATTGTGCAGTGACGCACTGTTCTACTTCAGAGAAAGGGTGAGAGGACATCTAGTTCAGTCCCTGTGCGGTAGCTGCAacccttaaaaatgaaatatcaacTCTAAGGGTATATATTTGACCTTGAAAGAATACTTAGGAAATAGTTGGTTTTGATGGGGTCATGATTAAGGAAAGATATATTGGTTTTATTTATAGAATTGTTCAGAGTGCATACAAATCAGCGATCAGCGGGCAAGTATTTTTCTTTGAGCTCATTAAAGCTCCATATTCTTTTGCCTTCAATCTGTTGTCTTTGAAACAAAGCTtttgctccctcccccttttctttttccctttttgcttgtATGCATAAGGTAGAACTTTTTCATAAGAAACAAATGCCAGTATTTTCTTAAGCCATGATGTGAAACCAATGATCCTGTGGCCACGTGGCACAGAACACTAAATTTCGGTCCTGTGGCTGAAACTTTAGGGTGACTAAAAGAAATGCGTGTGGAACATGATGCCCTAACAGGGACGCCATTTGATCTCTGGACATGCGGAATTTTGTACACTCCACAGAACTCCTCTCTGTAGTAAAgttgattttcaattttaaacaTGTAGGCAAAAAGGCAAAATTTTCTCCAagaattttaaactaatttttatttttaaatggttgaccAAAATTTGTCAGTAAATTTTACAtgtagaaacattttaaaaatcatttctagcAAGCACTTGGCATCTAGTCAGCTCTCtactcctttttcattttgttctatcCGATCAATAGATTAGGAACTCTTTTCTGCAGAGAACAGAAGTCCTCGTAATTAAGCAGCAGAGCGCCCATCGTCACGAAGTAGGCGGTGCCAGATGTTGATAAACTTAGTTACTCTTTCCTAATCTGGACAAAGCAGACCTAACAGATTTTCTGACGAGCATGTTTATGAATCTTCCATTGTGCTCCATTCTATCACATGTGCATTTTTCATGTTAAACTGCAGTTACTTAAACTCTTCCCCGTCCttctaaattaattttccaaagttGGAGTGTAGTCTTTCCCCTTAGGCTATGCATTAATTGAGGCTTTGTTTTCACCGTATCTGATGATGTCTAGTAGACAGTGTTTCCGCTTCCCACATCTTCGCTCCGCACACTCAccttgcccttcctcccaccaccTAAGGAAAAAAGATGGTCATGCTAACAGGTGAAGTGTACAAGGTGTCTGTGTGTTTTGTGTAGCTTCAGAGTTAGATTGAAATTGCCAGGCACAGATTTAGTCTTGTCATTTTGTTTAcacattgggggaaaaaattcagtttattaaaCGTTTCATGTAACTGCACCCAAGTTTTGCCAGCTGGAAACTTGGACCTTTTCTGTGTAGTGACTTTTTAATTCTAGTTTTCATAACCTGGAGATCAGACTGTTGCTTTCGCATGATGTATGTAGTGTCTCATGACTggagtttgctttgttttatagtATCTGTACTCCTTGTATTTTTCAAGAGCTATTTTGTAAACAGATGATGTATTTCTCCattgaaaacacaataaaaaaaaaaaaacagcacaa |
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