| Retrocopy Name | Gspt1P1 |
|
| Species | Rattus norvegicus | |
| Coordinates | chrX:63959530-63960839 UCSC | |
| Strand | - | |
| Parental Sequence | NM_001003978.1 | |
| Parental seq. overlap | 1151 bp | |
| Parental seq. overlap (%) | 45.2% | |
| Genomic Region |
Intergenic |
|
| Retrocopy Summary | Gspt1P1, located on chrX:63959530-63960839, is a retrocopy of the parental gene Gspt1. Retrocopies of protein-coding genes, also known as processed pseudogenes, are intriguing genomic elements with implications in genome evolution and diseases. While some retrocopies are non-functional, there are examples of retrocopies (retrogenes) acquiring regulatory roles or exhibiting neofunctionalization unrelated to their parental genes. |
| Gene Name | Gspt1 |
| Full Name | G1 to S phase transition 1 |
| Also known as | - |
| Coordinate | chr10:4313100-4347661 |
| Strand | + |
| Gene summary | Predicted to enable GTPase activity and translation release factor activity. Predicted to be involved in cytoplasmic translational termination and regulation of translational termination. Predicted to act upstream of or within protein methylation. Predicted to be located in cytosol. Predicted to be part of translation release factor complex. Orthologous to human GSPT1 (G1 to S phase transition 1). [provided by Alliance of Genome Resources, Apr 2022] |
| >Gspt1P1 |
| ACCATCAGGTGCTCCTAAGAAAGAACACGTAAATGTGGTGTTCATTGGGCATGTAGATGCCGGCAAGTCAACCATTGGAGGACAGATAATGTTTTTGACAGGAATGGTTGACAGAAGGACACTTGAGAAATACGAACGAGAAGCTAAGGAGAAGAATAGAGAGACCTGGTACTTGTCCTGGGCCTTAGATACAAACCAGGAAGAACGAGACAAGGGTAAAACAGTGGAAGTGGGCCGTGCATATTTTGAAACAGAAAAGAAACATTTCACAATCTTAGATGCCCCTGGCCACAAGAGTTTTGTCCCAAATATGATTGGTGGTGCTTCTCAAGCTGATTTAGCCGTGCTGGTCATCTCTGCCAGGAAAGGAGAATTTGAAACTGGGTTTGAAAAAGGTGGACAGACAAGAGAGCATGCAATGTTGGCCAAAACAGCAGGGGTGAAATACTTAATAGTGCTGATTAATAAGATGGATGATCCCACAGTAGATTGGAGCAGTGAGCGATACGAAGAATGTAAAGAGAAACTGGTGCCCTTTTTGAAAAAAGTTGGATTCAGTCCAAAAAAGGACATTCACTTTATGCCCTGCTCAGGACTGACTGGAGCAAATATTAAAGAGCAATCCGATTTCTGTCCCTGGTACACTGGGTTACCATTTATTCCATATTTGGATAGTTTGCCAAACTTCAACAGATCAATTGATGGGCCAATTAGGTTGCCCATTGTGGATAAGTACAAGGATATGGGCACTGTGGTCCTGGGAAAGCTGGAATCAGGGTCCATTTTTAAAGGCCAGCAGCTTGTAATGATGCCGAACAAGCACAGTGTGGAAGTTCTAGGAATAGTTTCCGATGATGCTGAGACTGATTTTGTAGCTCCAGGTGAAAACCTCAAAATCAGACTGAAAGGAATCGAAGAAGAAGAGATTCTTCCGGGCTTCATACTTTGTGAACCCAATAATCTCTGCCATTCTGGACGCACATTTGATGTTCAGATAGTGATCATTGAGCACAAGTCTATCATCTGCCCAGGTTACAATGCGGTGCTTCACATTCATACGTGTATAGAGGAGGTCGAGATAACAGCCTTGATCTCCTTGGTAGACAAAAAGTCAGGAGAAAAAAGCAAGACACGGCCCCGCTTTGTGAAGCAAGATCAAGTGTGCATTGCCCGGTTAAGGACAGCAGGAACTATCTGCCTGGAGACGTTTAAAGATTTTCCTCAGATGGGTCGTTTTACTTTAAGAGATGAGGGAAAGACCATCGCGATTGGAAAAGTTCTGAAGCTGGTCCCAGAGAAGGACTAAGCAA |
| >NM_001003978.1 |
| GCCGCTGTCGCCCCGGTCGCGAGTGCTCAGTCTGGACTGTAGCTGCTGCCCAGGACGCCGGCGAGTGAGTCGTTGGTCTCCAGCTCCCCAGTCTTGCCACCTTCCCTGGGTCATTGCGGCCTGCTCCTCCCCGGTCGGCCGCCCCCGCCTCCATTTCCCGCCCTCTCTTCACCACACACACGGCCCCCCCGATCATGGATCCCAgcagcggaggtggtggcggaggcggcggcggcggcggcgggagcagcagcagcagtagcGACTCTGCGCCCGACTGCTGGGACCAGACCGATATGGAGGCTCCCGGGCCGGGGCCTTGCGGCGGTGGCTCCATGGCCGCGGTGGCCGAGGCCCAGCGTGAGAACCTCAGCGCGGCTTTCAGCCGGCAACTCAACGTCAACGCCAAGCCCTTCGTCCCCAACGTCCACGCCGCGGAATTCGTGCCGTCTTTCCTGCGAGGTCCGGCCCAGCCGCCGCTATCCCCGGCTGGCGCGGCCGGCGGTGACCACGGAGCGGGCAGCAGCGCGGGAGGCCCTTCGGAACCTGTGGAGTCCTCTCAAGAGCAGTCATTGTGTGAAGGTTCAAATTCTACTGTTAGCATGGAACTTTCAGAACCTGTTGTAGAAAATGGAGAGACAGAAATGTCCCCAGAAGAATCATGGGAGCACAAAGAAGAAATAAGTGAAGCCGAGCCAGCAGGTGGTGGTTCCTCAGGAGATGGAAGGCCACCAGAGGAAAGCACCCAAGAAATGATGGAGGAGGAAGAAGAAATACCAAAACCTAAGTCAGTGGTGGCACCACCAGGCGCTCCTAAGAAAGAGCATGTAAATGTAGTGTTCATCGGGCATGTGGATGCTGGCAAGTCAACCATTGGAGGACAAATAATGTATTTGACTGGAATGGTCGACAAAAGAACACTTGAGAAATATGAACGAGAAGCTAAAGAAAAAAACAGAGAAACTTGGTACTTGTCTTGGGCCTTAGACACAAATCAGGAAGAGCGAGACAAGGGTAAAACAGTAGAGGTGGGCCGTGCCTATTTTGAAACGGAAAAAAAGCATTTTACAATCCTAGATGCTCCTGGCCATAAGAGTTTTGTCCCAAATATGATTGGTGGTGCCTCTCAAGCTGACTTGGCTGTACTGGTAATCTCAGCCCGGAAAGGAGAGTTTGAAACTGGATTTGAAAAAGGAGGACAGACAAGAGAACATGCGATGTTGGCAAAGACAGCAGGTGTCAAACACTTAATCGTGCTTATTAATAAGATGGATGATCCAACAGTAAACTGGAGCAATGAGAGATATGAAGAATGCAAAGAGAAATTAATACCATTTTTAAAGAAAGTTGGCTTCAATCCCAAAAAGGACATTCATTTTATGCCCTGCTCAGGACTGACAGGAGCAAATCTTAAAGAGCAATCAGATTTCTGTCCTTGGTACATTGGCTTACCATTTATTCCATATCTGGATAATTTGCCAAACTTCAATAGATCAGTTGATGGACCAATCAGGCTGCCAATTGTGGATAAGTACAAGGATATGGGGACTGTGGTCCTGGGAAAGCTGGAATCTGGATCCATCTGTAAAGGCCAGCAGCTCGTAATGATGCCCAATAAGCACAACGTGGAGGTCCTTGGAATACTTTCTGATGATGTAGAGACGGACTCTGTAGCTCCAGGTGAAAACCTCAAAATCAGACTGAAAGGGATTGAAGAGGAAGAGATTCTTCCAGGATTCATCCTCTGTGATCTTAATAATCTTTGTCATTCTGGACGCACATTCGATGCCCAGATAGTGATTATAGAGCACAAGTCCATCATCTGCCCAGGGTATAATGCGGTGCTGCACATTCACACCTGTATCGAGGAAGTCGAGATAACGGCCTTAATCTGCTTGGTAGACAAAAAATCAGGAGAAAAAAGTAAGACTCGACCCCGTTTTGTAAAGCAAGATCAAGTATGCATTGCTCGTTTAAGGACAGCAGGAACCATCTGCCTGGAGACCTTTAAGGACTTCCCTCAGATGGGACGTTTTACCTTAAGAGATGAAGGTAAGACCATTGCAATTGGAAAAGTTCTGAAACTGGTTCCAGAGAAAGACTAAGCATTTCCTTGATGACCCTGCACAATACTGTGAGGAAAATTGACTGCAAAAGCCTACTTCACACCGCCTTCTCTTACTTTCTGCCCATTGACAAACCTCTCCCCATATTTTGCAAAGAAAATTCCCAGCAAAAGTCCACATCATGTCAGCTTTCTCATATTGAGAGCTTGGCTATGCCAGTTTGACTTCCCCAAGAGTTTGCCCCACAAACTTTGCTTCCTTGGACACATTTGGCAATAGCTTTGTAAGTGATGTGGACATGATTGCCTACAATAAGGAAACCTACAGGAAGTTTTTTATTTTTCATTTTCCCCTTAGGCATAGTTAGTCTTTTTCTCCCCAGGCAGATCATTCTGAGTGTGCAAGTGTGTGTGCACATGTTAAAAAGACAACTACCATGTTAATAAAATATTCAATTTGAAACCCTTTCGGTATTTGAA |
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