| Retrocopy Name | GSPT1P1 |
|
| Species | Rhinolophus ferrumequinum | |
| Coordinates | scaffold_m29_p_1:84331470-84333213 UCSC | |
| Strand | - | |
| Parental Sequence | GSPT1_x2 | |
| Parental seq. overlap | 1134 bp | |
| Parental seq. overlap (%) | 15.1% | |
| Genomic Region |
Intergenic |
|
| Retrocopy Summary | GSPT1P1, located on scaffold_m29_p_1:84331470-84333213, is a retrocopy of the parental gene GSPT1. Retrocopies of protein-coding genes, also known as processed pseudogenes, are intriguing genomic elements with implications in genome evolution and diseases. While some retrocopies are non-functional, there are examples of retrocopies (retrogenes) acquiring regulatory roles or exhibiting neofunctionalization unrelated to their parental genes. |
| Gene Name | GSPT1 |
| Full Name | N/A |
| Also known as | NULL |
| Coordinate | scaffold_m29_p_29:7918893-7949508 |
| Strand | + |
| Gene summary | N/A |
| >GSPT1P1 |
| GGCACCTGTGGAACATTCCAAAGAGGAACAGATAGTGTTGCATAAAGGTTCCAATTCAGCCGTTAACATGGAACTTTCAGAACCTGTTGTAGAAAACGGAGAGGTGGAGATGGTCCTAGAGGAGTCGTGGGAGCACAATAAAGAAGTAAGTGAAGCTGAGCCAGGGGGTAGTTCCTTAGGAGATTCAGGGCCTCCAGAAGAAAGTGGCCAGGAAATGATGGAGAAAGAGGTAATGAGAAAATCTAAGTCTGTGGCCGTACCCTCAGGTGCTTCTAAGAAAGAAATCCCACAGTAAATTGGAGCAGCGAGAGATATGAAGAATGTAAAGAAAAACTGATGCCCTTTTTGAAAAGAGTCGGCTTCAGTCCCAAAAAGGACATTCACTTTATGCCCTGCTCAGGGCTGACCGGGGCAAATATTAAAGAGCAGTCAGATTTCTGCCCTTGGTACACTGGGTTACCATTTATTCCGTATTTGGATAATATGCCAAACTTCAACAGATCAATTGATGGACCAATTAGACTGCCAATTGTGGATAAGTACAAGGATATGGGCATTGTGGTCCTGGGAAAGCTGGAATCAGGATCCATTTTTAAAGGCCAGCAGCTTGTGATGATGCCAAACAAGCACAATGTGGAAGTTCTTGGAATACTTTCTGATGATGCTGAGACTGATTATGTAGCCCCAGGTGAAAACCTTAAAATCAGACTAAAGGGAATTGAAGAAGAAGAGATTCTTCCAGGATTCATACTTTGTGACCCTACTAATCTTTGCCATTCTGGACGCACATTTGATGTTCAGATAGTGATTATTGAGCACAAGTCCATCATCTGCCCAGGTTATAATGCAGTGCTGCACATTCATACTTGTATTGAGGAAGTTGAAATAACAGCCTTAATCTCCTTGATTGACAAAAAATCCGGAGAAAAAAGTAAGACCCGGCCCCGCTTCGTGAAACAAGATCAAGTGTGCATTGCCCGTTTAAGGACAGCAGGAACTATCTGCCTTGAGACATTCAAAGATTTTCCTCAGATGGGTCGTTTTATTTTAAGAGATGAGGGTAAGACCATTGCAATTGGAAAAGTTCTGAAGCTGGTCCCAGAGAAGGACTAAGCAGTTTTCTTGATACCCTGCACAATACTGTGAGAATTGACTACAAAAGTTCACCACCTTCTCCTATTTACTGGCCATAGACAGACTTTTCTCCATATTTTGCAAAGAGAAATTTCACAGCAAAAATCCGTGTTTTGTCAGCTTTCTCATGTTGAGATCTTAGTTATGCCACTAATGAAC |
| >GSPT1_x2 |
| GTGAAGGCTTTAAATGACTAGTCAAACAGTGAGTCATTGAAATTTGCAGTTAATAATGCCCTTTGCCGGGCAGAGCCTGGGCCCGAGCACTTTACGAGCCACATCGTAGTATAAGTTATAATGTCTCAAGGTTTTATTGTCTCTTCCACCAAATGAATACATAAAATGAAAGACGCTCTGCGTTGGCTTTGAAATGTAGGGCAAAATCTGGCTGGGGGAGGGGAGAAGGAAGGTGGAAAGAAAGAGAACAAGGTAGCGAGACTGTGAGGCAGAGAACGCGGAGAGGCTGGTGAAAGAGAAGGACGGAATTTTCAGGAGTCGAGAGTTTTTTTCCACATTAGAACTGCTGTCCGTTTCCCCCCCATCTTGTTGCTGACAGGACGGTGGACCATCCCCAGGGGCTGAAAGACTCGCTGTCCGCGGCCCGGCGCCCAGTCGCGCCACCGCTGCCCCAGTCCCTGCCCCCACTCGGTGACAGCTGGGACCGCCGAGCTGCCACCAGATCTCCGCCCCCTCGCACTGCTTGCTGGGAGCCCGAGTCGCTTCCGGTTGCTCCGGCCCCCGGAACTTCGACTCCCATCGGCCCCCGGGAAAACCGCAACAGGGTCGCGCGGGCACTGCCGGAACTCGTAGTTCCGTCTTCAGCTGCGCTCCATAGCCGGAAACGGGAACGGACACAGCCAGGACTACCAAGGCGAAGGTACGGGTGGCGGCGGGGTTCAATCCGCGCCGGGCGTGGGGTTGGCGCTGAGGCGGTCGGAGGTGGTTGGGGTTGGGTGGGAGGAGATCCGCTCGCACACACGAGGAGGGTTGAGCTATCGCCGCCGTCGTCGTGTGTGCGGAGTGGAGACTGGAGCTGCCGCCGCGACGACGCCGGGGATTGTATCGCTAGCCCCTGGCCCTTCTGCCTCGCCGCTTCTCGGGGTCAGTGCGGCCTGCTCCTTCCCGGCCGGTCGCCCCCGCCTCCATTTCCCGCCCTCTCTTCACCACACACACGGCCCCCCCGATCATGGATCCGGGCAGTGGTGGTGGCGGCGGCGGCGGCGGGAGCAGCAGCGGCAGCAGCAGCAGCGACTCGGCGCCCGACTGCTGGGACCAGGCAGACATGGAAGCCCCTGGGCCGGGGCCGTGCGGCGCCGCCGGCAGCGCCAGCGGCCCCTTGGTGGCGGCTGCGGCCGAGGCCCAGCGTGAACATCTCAGTGCGGCCTTCAGCCGGCAACTCAACGTCAACGCCAAACCCTTCGTGCCCAACGTCCACGCCGCTGAGTTCGTGCCGTCCTTCCTGCGGGGCCCGGCCCAGCCGCCACCACCCTCAGCTGGCGCCGCCGCCAACAACCACGGAGCCGGCAGCGGCGCGGGAGGCCCTTCGGCACCTGTGGAACCTTCTCAAGAGGAACAGTCGTTGTGTGAAGGTTCAAATTCAGCTGTTAGCATGGAACTTTCAGAACCTGTTGAAAATGGAGAGACAGAAATGTCCCCAGAAGAATCATGGGAGCACAAAGAAGAAATAAGTGAAGCAGAGTCAGGGGTTGGGTCCTTGGGAGATGGAAGGCCTCCAGAAGAAAATGCCCAAGAAATGATGGAGGAGGAAGAGGAAATACCAAAACCTAAATCTGTGGTTGCACCACCAGGTGCTCCTAAAAAAGAACATGTAAATGTGGTATTCATTGGGCATGTAGATGCTGGCAAGTCAACCATCGGAGGGCAAATTATGTATTTGACTGGAATGGTTGACAAAAGGACGCTTGAGAAATATGAAAGAGAAGCTAAAGAAAAAAACAGAGAAACTTGGTACTTGTCATGGGCCTTAGACACAAATCAGGAAGAACGAGACAAGGGTAAAACAGTAGAAGTGGGTCGTGCCTACTTTGAAACAGAAAAAAAGCATTTCACAATTCTAGATGCCCCTGGCCACAAGAGTTTTGTCCCAAATATGATTGGTGGTGCTTCTCAAGCTGATTTGGCTGTACTGGTAATCTCAGCCAGGAAAGGAGAGTTTGAAACTGGATTTGAAAAAGGAGGACAGACAAGAGAACATGCAATGTTGGCAAAGACAGCAGGTGTAAAACACTTAATTGTGCTCATTAATAAGATGGATGACCCAACAGTGAATTGGAGCAACGAGAGATATGAAGAATGTAAAGAGAAACTAGTGCCATTTTTGAAAAAAGTTGGCTTCAATCCCAAAAAGGACATCCACTTTATGCCCTGCTCAGGACTGACTGGAGCAAATCTTAAAGAGCAGTCAGATTTCTGTCCTTGGTACATTGGATTACCATTTATTCCATATCTGGATAATTTGCCAAACTTCAATCGATCAGTTGATGGACCAATCAGGCTGCCAATTGTGGATAAGTACAAGGATATGGGCACTGTGGTTCTGGGAAAGCTGGAATCAGGATCCATTTGTAAAGGCCAGCAGCTTGTGATGATGCCAAACAAGCACAACGTGGAAGTTCTTGGAATCCTTTCAGATGATGTAGAAACTGATTCTGTAGCCCCAGGTGAAAACCTCAAAATCAGACTGAAAGGAATTGAAGAAGAGGAGATTCTTCCAGGATTCATCCTTTGTGATCCCAATAATCTTTGTCATTCTGGACGCACATTTGATGCCCAGATAGTGATTATAGAGCACAAATCCATCATCTGCCCAGGTTATAATGCAGTGCTGCATATTCATACCTGCATTGAGGAAGTCGAAATAACAGCCTTAATTTGCTTGGTAGACAAGAAATCAGGAGAAAAAAGTAAGACTCGACCCCGTTTTGTGAAACAAGATCAAGTATGCATTGCTCGCTTAAGGACAGCAGGAACCATCTGCCTTGAGACCTTTAAAGATTTCCCTCAGATGGGTCGATTTACCTTAAGAGATGAGGGTAAGACCATTGCAATTGGAAAAGTTCTGAAATTGGTTCCAGAGAAAGACTAAGCATTTTCTTGATGACCCTGCACAATACTGTGAGGAAAATTGACTGCAAAAGCCTACTTCACACCGCCTTCTCTTATTTTCTGCCCATTGACAAACCTCTCCCCATATTTTGCAAAGACAAAATTCACAGCAAAAGTCCACATTATGTCAGCTTTCTCATATTGAGAGCTCTGCTATGCCACTATTGAATTTTTCCCAAGATTTTTTTCTTCCCCTCTCAAACTGCTTCCTTGGACAGACTTGGCAATAGCTTTGTAAGTGATGTGGACATAATTGCCTACAATAATGAAAACCTACAGAAATTTTTAATTTTTCATTTTCCCCTTAGGCATACTTAGTCTTTTTCCCCCCAGGCAGATCATTCTGAGTGTGCGAGTGTGTGTGCACGTTACAAAGACACAACTACCATGTTAATAAAATGTTCAATTTGAAACCCTTTTCGGTATTTGAATTGCTTTTGAATAACGTTTTTTATCTGGATGTAATTGTTGCATTAGCTTTTTAACTTTACCAAGTAATTGAATACATTTTATTACTTGGACTTTTCTAAACTCCCTATCCACTACTTTAAATGAGGCATTTACAAACAATAGTCAAGTTTGTATTAAAGGAGAGAATTAGTGTGACCCCTTCTTTTGATGGGAATGCATACATACAATGAAATACCTTTCTGTTACTGTGACACTGCTTTATTAGGTCTTTATCAGTTATTTTCTGCCATTTATATTTTGACAAGATTTCTTAATTACAGTAAGTTGTTTTAAAAGAACAGCATACTGTAGTTTTTATTAAGTAAAGCGTAATGAAATTGTACCCCTACAGAATATTCCATTAATTTGTTAAATGAGTGAAATTTACAATAAAGCAAGCATGTTGAGACCCGGCAAAAATGCCTCCTTTAGAATTTATAAGAGCTGCATGCATCTAGTATGAAAACTGTTATCAACTGCAAGTGCCAGTTCTACAAATTACTCAGTTTACTACTTGTATCACTGATTTTAAGGTTGGATGGTCCTTGCTGGTTCAAGTTAAATCTCATCCAGCCCTAAATGAACTGAGAACCATCAGAATCTGCACAGATTAAAGTTAACAGTGATAAGTAGAATCAAGCACAGTATAAGTTTTTCTCAACTATTTAAAATTGACTGTTTTCTTAAATATACAGTTGAAATTTGTTAAACTATGATTTGGATGAAACACAATGCAGCATTATGGTGATTTTAGGTTGAAGGATAACTTTGAAATTTTTAATGACAGTAAATGGGAAATGGAAGAGATTTCTGGGTTTATTAGAAGCCTCTCTCTTGATTTTGAGTGTTGCTATTTATCAAAGACTTGGCTTTTTAGATTGTGATTTATCTCTAAATAAAATACTTTGTAATTATATATTTAACGACATGTCCCTTCCCTGTAATCTTTCTCCTCAAAAAAGAAAAGCCTAGTCAAACTATTTCCAGTCACAAAACCTGTAACTTAATTTAACCCTGTTTTCTTAACTATAGAATTTCCATTCATTTCATGAACGAGGCTACATCTATGAACAAAGCAAAGTTACTGTCCTGCAGCTTCTTACAACTACTCTCATGGCTATTAAATTGCGTGAAATTTGAATTTTATTTTGCTAATCTCTGGGCTTTTATTTTTCTGGGAAATGTGGGAGCTTTAACCAGTACATAACTGTTTGTACTTCCAAGTTAATAACAAAATACTATCAATTGCTTGGATTTTAATGAATCTTTAAAAGCTCAAGCACATTGAAATTATTTCCAAAGATAGATTTCAATTTTTAAAAACCAGTTAGTTATGTTTGCTATGAAAACATTTACACTTTCAGAATATTATGTGCATGTTGCCAACACAGTAAAAGGACATGGGTATCAAGTGTGAAGGGCCTACCTCTGAAAAATAAACGGTAAATATAAATGCAGTTATGAAAGAAAAATTTCATTGATTCTTGCACATTTGTGCAAATAATTAGATTATTTAAAAGAAACTTCACTGTTAAAGTAACCAACACCATATGCTTTATGGGCTTTGAAGTTTTTTGGAGAAGTATTCTCATAAAATTGCTGCATTTTAAACCAATTACACTGGCTATTTACTTGGATGAGGAAATAAATATCTGAAATGAACTGGCAGTGTGTGGAGATGTTGGACCTTTACAAAGCAATACAGATTCCTCTGCTGTCATTTTGTCTTCTGCTAGTGCAAGTGTGTTTATGTGGCTGACAATGCAAAAACAGGATAATTGGCTACAGATTTTGAGTATTACAAACCTAAATATTTTTTCCTCTATCTTTAGCATAGATATGTTAGAATCACAATTTTCTTTGCTTTAATGCTGTTCTTTATATAACTTTCATGCTAGGTTATTTATAGTTTTTTAAATTCATTAACTGAATTTAAGATCATTGAAATAAACGTTAATTGCCATTTTTAACCCTTATTTAAAGGGGAGGGAAATATAGCACCTACTGCTTCTTTTTAATTTTCAAAAAGGATTTATACAGGGAAACTGTGTAAAATCAAACCAGAAGAGTTGGACTGAGTATGCACTGCCATGAACTTACGTAACAAATAGTGAAGTTCTTGAATAATTAAGCCCATGTATATTTGCTTTGAATTGAAAGTCTTGAAATATGTGATAACTGAATGTAAAAACTTTGTAAATTGTTAAAGTACAAGTTGTTCCTGTAACAAGGTAATTCAGGCTTGTCTGCTAGTTACGTAAATTTAAGAACGGATTTACAATACGGGATGGACTTTGAACGTGATGCCAGTGAACAGTTACCAGCATCCTCTCAGCTGAAGCGCTGCAGATATTTTGGGTCATACTTTCAACCAGGTGCAAATTTGCAATCCAAGAAAAAGGTGGACCTATCTATGGTCAAAACCTGCTTCGATGATGAACTTTTGAAAACAATCAGCTAAACCCCCTGGCAGTCTTCAGGAACACTAGTTATGACTAATTCCTCCGTGGTCTTTGATGATTTTCCATACGACAGCAGTCTAGCACCTTTCCTCACTGGCATGGACTTCCTCATGGATTGCTGCTTCATGGACGATGGCTTCATTGCGCTGGGTAGGGATTCAAGGTAGTCAAGGGACAGATACAGTTCTATTACAGCTCTTAATTAACATCAGACAACTTTCAACCTTTAAACCCTTTGTGAAAATTCTGGTTCCAGCACTAGAGTTCTGATTGTAGGTTAAGTGTTATATTCCGTGTTGGCCTACCTTATCAGAATAAACTGTGCCATTAATCCTCTCACAGACTTGTCAGGTAGATGGTAATCAATAGGATTTAGGGGACGATTTTGTCTCCAAATCATAGGCTTTTATTTCCTCCAGCAAATTACATAGTGATTGTAGCAGATGCCATCTAATATTCATGATCTTGTTTCTTTCTTTAGAGATCTTGCCATGGCAGCAACTTGTTTGTTAAATAAATGTAATTACATAGCACAACTCAAAAGACTAGATTTAAATTTAGCAGTCGGTTAGATTTCATAGGAATAGGAAATATTTTTACTTTGCTGTGTGTAGTTCAGTGGATTCCATTTGGACCAATTTACTTCCAGAATTCAGATAGGGTAGATTTGGTTCAGCTTGTAATGGTTTTGGCTCTAGGATATTTTTGATTTTCAGTATCCTAGAACATATTAAGTCTCCCCTTCAGTAAATACACTTTTGAATCCTGTAATCCTTTGCTTCCTTCAAACAGTAATATGCTAGCCAAGTTGTTTACTAAGGAATGTTATAAGGGCCCTGGAGGTGTGGAAATGGAGATTAAAACCTTTATGTTCTCCAATATAAGGGAAAAGCAGATAGGCACCATGTCTGATTAGGCAAAGTTACACAGGATTTCTTAAGCAACCCTTGGAATAATTGTCTTTTATGCCTTGTCACACATACCACTGCGCCATTTAACATTTAACGTGGAAACCTCAGGTCTGTAGGCAGCAAAGGTGAAAGACATCTTGTGCTTCCTGAGGCTCCCCTCAGCTAGGCACATTAACTTAACGCGACAGATGTCAGCCTAAGTCCCTGCCTACCTCCTTTTCTGCTGCCCGGGAAGAGTATTTGTGCTGGAGCTGGAGCTCCTGCATTCCTCAGGGGATCATCCACAGGAATTAGGTAAAACCGAGGTCTGAGCTGGGAAGGTCTGCATTTTATGGACTCACATTGGGCTCTCAGAAATGGACACACTTTGGTTAGCTAGTTTCACCTTTTTGTTCTAAAGGAAATGTGGATCTCTCTCAGGCCAGGATTTAGTGACGTTTTCACTAGACAGAAGGTTAATACCTAGCTCTCCAAAAAAAGGGGAAAAGGCAGAATTAAAGGGAATCGATTAGATTTGCTTTTGCTGAGGGTTTTTTTAACCTAATTCCAAAGCAAGGCAGAATGTTCTAGGTAGGAATTATGGGAATCCAAGGTGAAGAAATCTTTCATGATTTGTACTACCTACTGTGCCTGACAGTGGTGCCTGTGTGAGGATTAAGCCCTTACTTAGTCTGCTCTTGGAATTACTCAAATGACTGAAGTATGAAAATACTTGCTTTTGTAATAATAAAAACTGTCAACT 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| PMID - Link | Title |
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