| Retrocopy Name | RhocP1 |
|
| Species | Rattus norvegicus | |
| Coordinates | chr6:33690679-33691009 UCSC | |
| Strand | - | |
| Parental Sequence | NM_001106461.1 | |
| Parental seq. overlap | 270 bp | |
| Parental seq. overlap (%) | 21.3% | |
| Genomic Region |
Intergenic |
|
| Retrocopy Summary | RhocP1, located on chr6:33690679-33691009, is a retrocopy of the parental gene Rhoc. Retrocopies of protein-coding genes, also known as processed pseudogenes, are intriguing genomic elements with implications in genome evolution and diseases. While some retrocopies are non-functional, there are examples of retrocopies (retrogenes) acquiring regulatory roles or exhibiting neofunctionalization unrelated to their parental genes. |
| Gene Name | Rhoc |
| Full Name | ras homolog family member C |
| Also known as | - |
| Coordinate | chr2:207271692-207278010 |
| Strand | + |
| Gene summary | Predicted to enable GTP binding activity; GTPase activity; and protein kinase binding activity. Predicted to be involved in several processes, including cytoskeleton organization; positive regulation of cellular component biogenesis; and skeletal muscle satellite cell migration. Located in cytosol and membrane. Orthologous to human RHOC (ras homolog family member C). [provided by Alliance of Genome Resources, Apr 2022] |
| >RhocP1 |
| ATCCGCAAGAAGCTGGTGGTGGTGGGCGACGGCGCGTGCGGCAAGACGTGCCTGCTGATCGTGTTCAGTAAGGACGAGTTCCCCGAAGTGTACGTGCCCACCGTGTTCGAGAACTATGTGGCGGACATCGAGGTGGACGGCAAGCAGGTGGAGCTGGCGCTGTGGGACACGGCGGGCCAGGAGGACTACGATCGTTTACGGCCGCTCTCCTACCCGGACACCGACGTCATCCTTATGTGCTTCTCGGTAGACAGCCCGGACTCTCTCGAGAACATCCCCGAGAAGTGGGTGCCCGAGGTAAAGCACTTCTGCCCCAATGTGCCCATCATCT |
| >NM_001106461.1 |
| GGAACTGACCTCGGAGGAGAGCACTTTCCTGCTTCCCGGATCGCTCGGGGAACGGCTCAGGAGGGGGTTCCGGGCGGGGTATGGGAGAGCGTCCTGTGCCGCGGGGCAGGCGCTCTCGCCTCCTGAGCTCTCGAACCACAGCCCAGAGCCCCTTCCCTTTCTGAGTCTTGCCTCTCCGGACCTCCCTAGCTGGGCCAGGAACACACTTGGATCTCCCTGAGCGACTCTACCCAGAAGCTCCAGTTCCGGGCGGGGATTTCAGTCATGGCCACAATCCGAAAGAAGCTGGTAATTGTGGGTGATGGCGCCTGCGGGAAGACCTGCCTCCTCATCGTCTTCAGCAAGGATCAGTTTCCGGAGGTCTACGTCCCTACTGTCTTTGAGAACTACATAGCAGACATCGAAGTGGATGGCAAGCAGGTGGAGCTGGCTCTGTGGGACACAGCAGGGCAAGAAGACTACGATCGCCTGCGGCCTCTCTCCTACCCGGACACTGACGTCATCCTTATGTGTTTCTCCATTGACAGTCCTGACAGCCTGGAAAACATTCCTGAGAAGTGGACCCCGGAGGTGAAGCACTTCTGTCCCAATGTGCCCATCATCCTAGTGGGGAATAAGAAGGACCTGAGGCAAGATGAGCATACCAGGAGAGAGCTGGCCAAAATGAAACAGGAGCCGGTTCGATCTGAGGAAGGCCGGGACATGGCAAACAGGATCAGCGCCTTCGGCTACCTTGAGTGCTCAGCCAAGACTAAGGAAGGGGTGCGGGAGGTATTTGAGATGGCCACTCGGGCTGGCCTACAGGTCCGGAAGAATAAGCGCCGGAGGGGCTGTCCCATTCTCTGAATTCCCCAAAGCCTCCTTAACCCTCCCACTCTTCCCTTCACAGGGGTACAGACCCCCCTCCCCCCATTTCATCCTTGTAGGATTTCATGCTGCCAGTTTCTTTTTTGGTTCCTTTCTGCCCTGGACTGCATGAGTTTCCCCAGCCCCAAGTGGGGGCTGCTAGGCCCCTTCTCCCTGCCTCTGGGAACTAGGTTGGTGCCCTGCCCTTCTTTTGCAGGGCTCCTCCTCCTGATGAGGTCCAGGGGTGGGGTTCTTAGTCCGTTTGGCCTTCCCCATATTACACACCAGCACTTTATATATTTTTGGCTCACAGGAGGAGTCTAGGATAGGGACTGGGGTTTCTGCTTTGGGTAGTAGCCTTGTATTTGACTTTACTTGGTGGGAGGGCAGGACATGAATAAAGGTCAAAGGTTGCACCATG |
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