Retrocopy Name | RHOCP1 |
|
Species | Bos taurus | |
Coordinates | chr11:78400100-78400464 UCSC | |
Strand | - | |
Parental Sequence | NM_001046138.2 | |
Parental seq. overlap | 305 bp | |
Parental seq. overlap (%) | 28.3% | |
Genomic Region |
Intragenic (Il1rapl1) |
|
Retrocopy Summary | RHOCP1, located on chr11:78400100-78400464, is a retrocopy of the parental gene RHOC. Retrocopies of protein-coding genes, also known as processed pseudogenes, are intriguing genomic elements with implications in genome evolution and diseases. While some retrocopies are non-functional, there are examples of retrocopies (retrogenes) acquiring regulatory roles or exhibiting neofunctionalization unrelated to their parental genes. |
Gene Name | RHOC |
Full Name | ras homolog family member C |
Also known as | - |
Coordinate | chr3:30618175-30624456 |
Strand | + |
Gene summary | N/A |
>RHOCP1 |
CATGGCGGCCATCCGCAAGAAGCTGGTGGTGGTGGGCGACGGCGCGTGCGGCAAGACGTGCCTGCTGATCGTGTTCAGTAAGGACGAGTTCCCCGAGGTGTACGTGCCCACCGTCTTCGAGAACTATGTGGCCGACATCGAGGTGGACGGCAAGCAGGTGGAGCTGGCGCTGTGGGACACGGCGGGCCAGGAGGACTACGACCGCCTGCGGCCGCTCTCCTACCCGGACACCGACGTGATCCTCATGTGCTTTTCGGTGGACAGCCCGGATTCGCTGGAGAACATCCCCGAGAAGTGGGTGCCCGAGGTGAAGCACTTCTGCCCCAACGTGCCCATCATCCTTGTGGCCAACAAGAAAGACCTGC |
>NM_001046138.2 |
AGTCTCTGCCTCCCGCACCCGCAGCGCAGCTGGAAGCGGCGGAGCGGAAGCCATGGCTGCCATCCGGAAGAAGCTGGTGATTGTGGGGGATGGGGCCTGTGGGAAGACCTGCCTCCTTATCGTCTTCAGCAAGGATCAGTTCCCAGAGGTCTACGTCCCTACGGTCTTTGAGAACTACATCGCAGACATAGAGGTGGATGGCAAGCAGGTGGAGCTGGCTCTGTGGGACACGGCAGGGCAGGAAGACTACGACCGCCTGCGGCCTCTCTCCTACCCGGACACTGACGTCATTCTCATGTGCTTCTCCATCGACAGCCCCGACAGTCTGGAAAACATTCCTGAGAAGTGGACCCCAGAAGTGAAGCACTTCTGCCCCAACGTGCCCATCATCCTGGTGGGGAATAAGAAGGACCTGAGGCAAGATGAGCATACTCGGAGAGAGCTGGCCAAGATGAAGCAGGAACCTGTTCGATCTGAGGAAGGCCGGGACATGGCGAACCGAATCAGTGCCTTTGGCTACCTTGAGTGCTCAGCCAAGACCAAGGAGGGGGTGCGGGAGGTATTTGAGATGGCCACCAGGGCTGGCCTCCAGGTCCGCAAGAATAAGCGCCGGAGGGGCTGCCCCATTCTCTGAGCTCCCCAAGACCTCCCCTCCTTCCTTCAGGGGGTTGCAGAAACTCCCTCTGCCCCCTGGACCCCACCCTATCAGGGATCCTTGAAGGCTCCCTTTCCCAATTCCCTCCTGCCCAGGACTGCATTGAGTTTCCCCAGCCCTGACAGTGGTGGCCGTAGGCACGCCCCCTCCCACCAGCACCCTGGGAACAGAGGGGTACATCCTGCCCCTCACAGCACAGCCCCTCCTGTTGCCTCAGCCTGGGGTGGGGCTCTTGATCCCTTTGGCCTTCCCCAGAGGATCATCACACCAGCACTTTATACACTTCCTGCTCACAACCGATCTGGGGTAGGGGACTTGGTGGGTGTAACTGGGTCCCAGGCCCCTGGTGTTTCTGCTTTGGGCAGGAGCCTTGTCTCTGGCTATTCTTGGTGTGGGGTATGAATAAAGGCCATAGGCTCCAAAA |
PMID - Link | Title |
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