Retrocopy Name | RHOCP1 |
|
Species | Oryctolagus cuniculus | |
Coordinates | chr2:169568972-169569336 UCSC | |
Strand | + | |
Parental Sequence | XM_002715765.4 | |
Parental seq. overlap | 310 bp | |
Parental seq. overlap (%) | 27.6% | |
Genomic Region |
Intergenic |
|
Retrocopy Summary | RHOCP1, located on chr2:169568972-169569336, is a retrocopy of the parental gene LOC100008954. Retrocopies of protein-coding genes, also known as processed pseudogenes, are intriguing genomic elements with implications in genome evolution and diseases. While some retrocopies are non-functional, there are examples of retrocopies (retrogenes) acquiring regulatory roles or exhibiting neofunctionalization unrelated to their parental genes. |
Gene Name | LOC100008954 |
Full Name | N/A |
Also known as | RHOC |
Coordinate | chr13:51451862-51457580 |
Strand | + |
Gene summary | N/A |
>RHOCP1 |
TCATGGCGGCCATCCGCAAGAAGCTGGTGGTGGTGGGCGACGGCGCGTGCGGCAAGACGTGCCTGCTGATCGTGTTCAGCAAGGACGAGTTCCCCGAGGTGTACGTGCCCACCGTCTTCGAGAACTATGTGGCCGACATCGAGGTGGACGGCAAGCAGGTGGAGCTGGCGCTGTGGGACACAGCGGGCCAGGAGGACTACGACCGCCTGCGGCCGCTCTCCTACCCGGACACCGACGTCATCCTCATGTGCTTCTCGGTGGACAGCCCGGACTCGCTGGAGAACATCCCCGAGAAGTGGGTGCCGGAGGTGAAACACTTTTGCCCCAACGTGCCCATCATCCTGGTGGCCAACAAGAAGGACCTG |
>XM_002715765.4 |
CCGCCCCTCTCCTCCCCTCCGCGGCGCCGAAGGAGGGCGGGGCAGGGGCCCTGGGGTCAGTCTCAGCCTCCGGCACCGGCCGCGCGAGCTGGAGGCGGCGGAGCGGAAGCCCCAGCCATGGCTGCAATCCGAAAGAAGCTGGTGATCGTGGGGGATGGAGCCTGCGGCAAGACGTGCCTCCTCATCGTCTTCAGTAAGGACCAGTTTCCTGAGGTCTATGTCCCGACCGTCTTTGAGAACTACATCGCGGACATCGAGGTGGATGGCAAGCAGGTGGAGCTGGCTCTGTGGGACACAGCAGGGCAGGAAGACTATGATCGCCTGCGGCCTCTCTCCTACCCGGACACGGACGTCATCCTCATGTGCTTCTCCATCGACAGCCCCGACAGTCTAGAAAACATCCCAGAGAAGTGGACCCCGGAGGTGAAGCACTTCTGCCCCAATGTGCCCATCATCCTCGTGGGGAATAAGAAGGACCTGAGGCACGACGAGCACACCAGGAGAGAGCTGGCCAAGATGAAGCAGGAGCCTGTTCGGTCTGAGGAGGCGGGACATGCGAACCGCATCAGTGCCTTTGGCTACCTGGAGTGCTCAGCCAAGACCAAGGAGGGGGTGCGGGAGGTATTCGAAATGGCCACTCGGGCTGGCCTGCAGGTCCGCAAGAACAAGCGCCGGAGGGGCTGTCCCATTCTCTGAGACACCCCCGCCCCAGGCCTCCCCTGCTTGCCTTCCTCCCTTCGCTGGGGTGCAGAATCCACCCTCCACTCCACTCTCCTAGGACTCCATGCTGAAGACTCCCTTTCCAGTTTCCTCCTGCCCAGGACTGCATCTGAGTTCCCCGGCCCCCTCCCCCTCCAGGTGGCCGTGACAGGCCCAGCCTTCGTGACAGGCCCAGCCTTCCGTAGGCAGAGCACCTCCTGCTGCTGCTGCTGCTGCCCTGTCAGGGGGCAGGGCTCTGGCTCCCTTTGGCCTTCTCCAGAGGACGGTCACACACCAGCACTTTATGCACTTCTGGCTCCGGGGAGTGGGTCTGGAGTAAGGACTGGGGTTTCTGCTTCGGGCAGGGGCCTTGTCTTTGTACTTGGTGGGGGGCACGAATAAAGGCCACAGGCTCCAACATGTG |
PMID - Link | Title |
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