| Retrocopy Name | RhocP1 |
|
| Species | Mus musculus | |
| Coordinates | chr12:8549269-8549633 UCSC | |
| Strand | - | |
| Parental Sequence | NM_007484.2 | |
| Parental seq. overlap | 296 bp | |
| Parental seq. overlap (%) | 28% | |
| Genomic Region |
Intergenic |
|
| Retrocopy Summary | RhocP1, located on chr12:8549269-8549633, is a retrocopy of the parental gene Rhoc. Retrocopies of protein-coding genes, also known as processed pseudogenes, are intriguing genomic elements with implications in genome evolution and diseases. While some retrocopies are non-functional, there are examples of retrocopies (retrogenes) acquiring regulatory roles or exhibiting neofunctionalization unrelated to their parental genes. |
| Gene Name | Rhoc |
| Full Name | ras homolog family member C |
| Also known as | Arh9|Arhc |
| Coordinate | chr3:104696350-104701775 |
| Strand | + |
| Gene summary | Predicted to enable GTP binding activity; GTPase activity; and protein kinase binding activity. Involved in apical junction assembly and positive regulation of protein-containing complex assembly. Located in nucleus; plasma membrane; and stereocilium. Is expressed in hippocampus. Orthologous to human RHOC (ras homolog family member C). [provided by Alliance of Genome Resources, Apr 2022] |
| >RhocP1 |
| CATGGCGGCCATCCGCAAGAAGCTGGTGGTGGTGGGCGACGGCGCGTGCGGCAAGACGTGCCTGCTGATCGTGTTCAGTAAAGACGAATTCCCCGAGGTGTACGTGCCCACCGTGTTCGAGAACTATGTGGCGGACATCGAGGTGGACGGCAAGCAGGTGGAGCTGGCGCTGTGGGACACGGCAGGCCAGGAGGACTACGATCGTTTACGGCCGCTCTCCTATCCGGACACCGACGTCATCCTTATGTGCTTCTCGGTGGACAGCCCGGACTCTCTCGAGAACATCCCCGAGAAGTGGGTGCCCGAGGTAAAGCACTTCTGCCCCAATGTGCCCATCATCCTGGTGGCCAACAAAAAAGACCTGC |
| >NM_007484.2 |
| AGTCTCAGCCTCCGGCACTGGCCGCGCAGCTGGAGGCGGTGGAGCCCAAGTTTCAGCCATGGCTGCGATCCGAAAGAAGCTGGTGATTGTGGGTGACGGTGCCTGTGGGAAGACCTGCCTCCTCATTGTCTTCAGCAAAGATCAGTTTCCAGAGGTCTACGTGCCTACCGTCTTTGAGAACTATATAGCCGACATCGAAGTGGATGGCAAGCAGGTGGAGCTGGCTCTGTGGGACACAGCTGGGCAAGAAGACTACGATCGCCTGCGGCCTCTCTCCTACCCGGACACTGACGTCATCCTCATGTGTTTCTCCATTGACAGCCCTGACAGTTTGGAAAACATTCCTGAGAAGTGGACCCCAGAGGTGAAGCACTTTTGTCCCAACGTGCCCATCATCCTAGTGGGGAATAAAAAGGACCTGAGGCAAGATGAGCataccaggagagagctggccaAGATGAAACAGGAGCCGGTTCGATCTGAGGAAGGCCGGGACATGGCAAACAGGATCAGTGCCTTTGGCTACCTCGAGTGCTCGGCCAAGACTAAGGAAGGGGTGCGGGAGGTATTTGAGATGGCCACTCGGGCGGGCCTACAGGTCCGGAAGAATAAGCGCCGGAGGGGCTGTCCCATTCTCTGACTTCCCCAAAGCTTCCTCAACCCTCCCACCCTTCCCTTCCCAGGGGTACAGTTACCCTCCCCCACGCCATCCTTGTAGGACTCCATGCTgccagtttcttttttggttcCTTTCTGCCCAGGACTGCATGAGTTTCCCAGCCCCAAGTGGGGGCTGCTAggcccttcctccctgcctctgggAACCGGGCTGGTGCCCTGCCTTTCCTGAGCAGGGCTCCTCCTCCAGAAGCGGTGGTCCAGGGGGTGGGGCTCTTAGTCCCTCTGGCCTTCCCCATATTACACACCagcactttatatatttttggctcACAGGAGGAGTCTAGGGTAGGGACTGGGGTTTCTGCTTTGGGTAGTAGCCTTGTTATTTGACTTAACTTGGTGGGGACATGAATAAAGGTCAAAGGTTGCACCGTG |
| PMID - Link | Title |
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