| Retrocopy Name | USP22P1 |
|
| Species | Macaca fascicularis | |
| Coordinates | chrX:48200374-48201416 UCSC | |
| Strand | + | |
| Parental Sequence | XM_005583135.2 | |
| Parental seq. overlap | 862 bp | |
| Parental seq. overlap (%) | 16.2% | |
| Genomic Region |
Intragenic (USP27X) |
|
| Retrocopy Summary | USP22P1, located on chrX:48200374-48201416, is a retrocopy of the parental gene USP22. Retrocopies of protein-coding genes, also known as processed pseudogenes, are intriguing genomic elements with implications in genome evolution and diseases. While some retrocopies are non-functional, there are examples of retrocopies (retrogenes) acquiring regulatory roles or exhibiting neofunctionalization unrelated to their parental genes. |
| Gene Name | USP22 |
| Full Name | N/A |
| Also known as | - |
| Coordinate | chr16:20612068-20657135 |
| Strand | - |
| Gene summary | N/A |
| >USP22P1 |
| ACTCATCAATCTTGGCAACACGTGCTTTATGAACTGCATCGTCCAGGCCCTCACCCACACGCCAATACTGAGAGATTTCTTTCTCTCTGACAGGCACCGATGTGAGATGCCGAGTCCCGAGTTGTGTCTGGTCTGTGAGATGTCGTCGCTGTTTCGGGAGTTGTATTCTGGAAACCCGTCTCCTCATGTGCCCTATAAGTTACTGCACCTGGTGTGGATACATGCCCGCCATTTAGCAGGGTACAGGCAACAGGATGCCCACGAGTTCCTCATTGCAGCATTAGATGTCCTGCACAGGCACTGCAAAGGTGATGATGTCGGGAAGGCGGCCAACAATCCCAACCACTGTAACTGCATCATAGACCAAATCTTCACAGGTGGCCTACAGTCTGATGTCACCTGTCAAGCCTGCCATGGCGTCTCCACCACGATAGACCCATGCTGGGACATTAGTTTGGACTTGCCTGGCTCTTGTACCTCCTTCTGGCCCATGAGCCCAGGGAGGGAGAGCAGTGTGAACGGGGAAAGCCACATACCAGGAATCACCACCCTCACGGACTGCTTGCGGAGGTTTACGAGGCCAGAGCACTTAGGAAGCAGTGCCAAAATCAAATGTGGTAGTTGCCAAAGCTACCAGGAATCTACCAAACAGCTCACAATGAATAAATTACCTGTCGTTGCCTGTTTTCATTTCAAACGGTTTGAACATTCAGCCAAACAGAGGCGCAAGATCACTACATACATTTCCTTTCCTCTGGAGCTGGATATGACACCGTTTATGGCCTCAAGTAAAGAGAGCAGAATGAATGGACAATTGCAGCTGCCAACCAATAGTGGAAACAATGAAAATAAGTATTCCTTGTTTGCTGTAGTTAATCACCAAGGAACCTTGGAGAGTGGCCACTATACCAGCTTCATCCGGCACCACAAGGACCAGTGGTTCAAGTGTGATGATGCCGTCATCACTAAGGCCAGTATTAAGGATGTACTGGACAGTGAAGGGTATTTACTGTTCTATCACAAACAGGTGCTGGAACATGAGT |
| >XM_005583135.2 |
| GCGGCGCCCCGCCCCGCGACGCCCTCCGCGAACCGGGAGAGCGCAGCGCGGGCGGCCAGCAGCAGCCGCAGCTCGGGGGCGGTGCCTGCCCCGCAGCCTCCCCTCAGCGATCGCGCAGCCCCATCTTTGTCTGGCCTCCGCGCTTTGTTCTCGGCGCCCGTGCCTTGGCCGGCCAGGCccgccgccgagcagcccctacgccgcgctggcgtcgtcctcgcccccctcgccgccgccccccgcgcgcggccgGGCCTTGCCCCCCATGGTGTCCCGGCCAGAGCCCGAGGGCGAGGCCATGGACGCCGAGCTGGCTGTAGCGCCGCCGGGCTGCTCGCACTTGGGCAGCTTCAAAGTGGACAACTGGAAGCAGAACCTGCGGGCCATCTACCAGTGCTTCGTGTGGAGCGGCACGGCTGAGGCCCGCAAGCGCAAGGCCAAGTCCTGCATCTGCCATGTCTGTGGCGTCCACCTCAACAGGCTGCATTCCTGCCTCTACTGCGTCTTCTTCGGCTGTTTCACGAAGAAGCATATTCACGAGCATGCGAAGTCAAAGCGGCACAACCTGGCCATTGATCTGATGTACGGAGGCATCTACTGCTTTCTGTGCCAGGACTACATCTACGACAAAGACATGGAAATAATCGCCAAGGAGGAGCAGCGGAAGGCTTGGAAAATGCAAGGCGCTGGAGAGAAGTTTTCAACTTGGGAACCAACCAAACGGGAGCTTGAACTGCTGAAGCACAACCCAAAAAGGAGAAAGATCACCTCGAACTGCACCATAGGTCTGCGCGGGCTCATCAACCTTGGGAACACGTGCTTCATGAACTGCATCGTGCAGGCGCTGACCCACACGCCACTTCTGCGGGACTTCTTCCTGTCTGACAGGCACCGCTGTGAGATGCAGAGCCCCAGCTCCTGTCTGGTCTGTGAGATGTCCTCACTGTTTCAGGAGTTTTACTCCGGACACCGGTCCCCTCACATCCCTTATAAGTTGCTGCACCTGGTGTGGACCCACGCGAGGCACCTGGCAGGCTACGAGCAGCAGGATGCCCACGAGTTCCTCATCGCGGCCCTGGACGTGCTCCACCGACACTGCAAAGGTGATGACAACGGGAAGAAGGCCAACAACCCCAACCACTGCAACTGCATCATAGACCAGATCTTCACGGGCGGGCTGCAGTCAGACGTCACCTGCCAAGTTTGCCATGGAGTCTCCACCACCATCGACCCCTTCTGGGACATCAGCTTGGATCTCCCCGGCTCTTCCACCCCGTTCTGGCCCCTGAGCCCAGGGAGCGAGGGCAACGTGGTAAACGGGGAAAGCCACGTGTCGGGAACCACCACGCTCACGGACTGCCTGCGACGATTCACCAGACCAGAGCACTTGGGCAGCAGCGCCAAGATCAAATGCAGCGGTTGCCATAGCTACCAGGAGTCCACGAAGCAGCTCACTATGAAGAAACTGCCCATCGTAGCCTGTTTTCATCTCAAACGATTTGAACACTCAGCCAAGCTGCGGCGGAAGATCACCACATATGTGTCCTTCCCCCTGGAGCTGGATATGACCCCTTTCATGGCCTCCAGCAAAGAGAGCAGGATGAATGGACAGTACCAGCAGCCCACGGACAGTCTCAACAATGACAACAAGTATTCCCTGTTTGCTGTTGTTAACCATCAAGGGACCTTGGAGAGTGGCCATTACACCAGCTTTATCCGGCAGCACAAAGACCAGTGGTTCAAGTGTGACGATGCCATCATCACCAAGGCCAGCATCAAGGACGTGCTGGACAGTGAAGGGTACTTGCTGTTCTATCACAAACAGTTCCTGGAATATGAGTAGCCTTATCTGTAGCTGGTCAGAAAAACAAAGGCAACGCAAGCCTCACAAAGTGATCCTCCCTGCCTCTCCCGCCTCCCGCCGCCTCCCCGGCCTGGTGACACCACCTCCCATGCAGATGTGGCCCGTCTGCACCTGGGACCCATGGGGTCGGGATGGACCACACGGACGGGGAGGCTCCCGGAGCTGCATTGAAGATGGATGAGATGAGGGGTGTGCTCTGGGTGGGAGGAGCAGCGTACACCCGTCACCAGAACATCTCCTGTATCCTCATGATATGGGGGTGCAACCGGGGCCTCACAGCACGGAGTGGCCGCCGCCTGGCATTCCCCAGCACTCGGTGTGGAAAGGCCCCTGCCTGCCGTAAGATTATGGGTCCATTGAAGCAGTAAGCTGAAGACACAGCAGCGTAGTATGTGGGACAGAGGGCCTTGCAGATGCCTTTCTGTTCATGTTTTAGTGTTAAAATACGGAGAGTATGGAATTCTTCACCTCCGTTTTCTCAGCGGCTGTGAAGCAGCCTCCAGAGCTTCGGAAGTAAGGATACTACGTCGCGTTTTCAAGCGTGTCTGTTCCGCAGGTAACTTAGCATCAAGCTGCACGTGGAAGCATCTCGCAGTTTTCTAAAGACAGGCATTTTCTTATCCCTCTCCCTCTCCTTTTTCCACAAAGGTGAATTTCATAAATGTAATACTAGTAACGTGAATGAATTACTGAGTTTATACTGAAATTTAGATAACTTCTCCTTTAGTCTTGAGTGCGAGTCTTGCTTTTTAATCGGTGCCGTTTATGTTGCTGCCCGCCCTGTGTGCCTGGCTCCTCTGGGTGCCTTGGTGTCTGCTGGGGGCTGGCAGTAAGCGCAGTGGAGGAGAGTCGTGCTGCAGCTCATCCTGTGTCTCTGGTATCTCAGGCTGGAGTAAATGCAGCCTCTGCCGGTGTCTGATAGGTTCCCTCCCGCATATTTTCTTTGTCTGCCTTCTGTCCCATTGCCTGGCTACCACTGCCTGGCAGCCAAGTGTGTTGGTCGCAAATCTGGAGTGGCCTCTGGTGGAGCCTGCATCTTGTCTCGTCTGCCTCTGCTTCACGTTTGGTGTACTTTCGGGCATGGTGGCGGTAAAATGACATCGTGATTGAGCTTGTCAGCAGAACTGAAAGAGAAAGTAGAAGGATATGCATTGTTCCTTGTAAGATATTTTGCATGTATCTGTGTATTCAGAAATGGTTTGTCCATTTGTCCACTGAGAAATTATAAACTAGGGGCAAGAGGGAGGCAAAGTACTTAAACATAGTTTATGAAGCAACTGTGTCTCAGGCTGGCTTGTCCCAGGAGCCCCAGCTGCATTTGAACTGAGGCTTCTTCAGTCCTGCAGGAACAGGATCATCTGTCTcgggggtgggcggatgtttttatagacagccagggagtcaacactgtcggctctgtgggctatgtggtctctgccataaataGTGCAGAagtgtggctatgtccagtacaacttttagacacagaaatctgaattgcatataatgttccgtgtcaagaaagttagatttttttttttttaaactatataaaaacatgaaacgtattcttagctcacaggccatggagaagctggtggggatcagaCCCAGCTCCTTAGCTGGCTGGGCTGGGGAGGGGGCGGTGACAGTGGCAGCTGAGTAGCTACTCACTGCTCAATGTAGAAAATACGAGAACACAGGACTTGGCGATCACAGCCCGCAGAACCGTCATGGGCGGCAGAAGCCTTAGGGATGCAGTTTCTTGCCCACGTGCTCAGTTCATTTTCTGTTGTCTTTCTGCATTTAATTCACGTGGAAGCATGCTTTATAAAATGAATTATCAGAGAAACAGATGGGCTGAGATTTTCAGAAATGGCCCCTTGTGACCAAGTTTTGCTGTTTCGATGACAGTGCTTTGAAGATCTCTTTTGAGGATGAGCAGTCtttttttttttttttgagatggagttttgctcttcttgcccaggctggagtgcagtggcgcagtctcggctcactgcaacctccacctcctgggttcaagcaattctcgtgcctcggcctcccacgtagctgggactacaggcatacaccgctacgtcgggctaatttttgtatttttagtagagatggggtttcaccatgttggccaggctggtctcgaactcctgacctcaggcaatccacccacctcagcctcccaaagtgctgggattacaagcatgagccactgcgcctggccTGTGAGCAGTCTTTTAGTCAGGAACAAATCTAATAGGAGAGTTGACTGAAGTTGGCCCACAGGATTCTGAGCTGGGCAGTGCCTCCCTGAAGGCTTGCTACCTTGGGACGCCCTGGTTTACTGCGGTGTCTTGCGGAAATGCAGAAGGCAGTGTGTGGGCCTTGGGCCTTTCTGGCAGCTGCCCGGGTTTGGCCAGGCCCTGCCTCCCCTCCCCACTGCCAACCCCTGGTCCCCTTCCTCTTTCCACTTGCATTCGGGGGTGTCTGCTGTTCTGAGAACATTAGAACTGGGAAGAGAGGTGGAGTCACATGCATTCTTGGTGGGCATTATTCTAAACTTTTGTATCCAAGTTCATCCCCCTTCTTCCACGGTGGCATTGCCGTTCTAAGCAGTTCCCCCATGCGTGCTGCTGAAGAGCTGCTCACCGGAGGCAGGCAGCGGCCCCGGCACTGCCCCTTGCATTAGGTCTTGTGTTTGATGTGCTCTTGTGAATTTACTTTGTCGGAACAAAATATTTACATGTTGGGTTCAGGAATCTCTCCTTTTAGCTCCCCATCTGGCTATGAAATTCAGGAAACCTGTTCTCCCGTTGCCTAGTAATCGCCCCATGTAGGTGTAAATTGTGACAAAGTGCATCTGACCACTAAGGGGCCCCCTCGGTGACCCCAACACATTCACAGCAGTGTTAAAAATGGCCTGTGTTTCGGAGATGCTGGCTGGCCTTTCAGTGCTTCCCAGGAAGCCACATGGCCTTTCCCTCTTCAGATGCCTGAAGGGAGTGCTTTGAGACAGGGGATGTGCTGGGAATGTGGGCGGCCTCCCTCCGGCCCCGGGGCCCTCTGTGGACCTGGGCTCCCTGGTGAGCACTGCAACCTCCCTGGGCGTTCCCTCCGGCGCCAGCGCCACTGCAACATATAGACCCGAGTGCTATTGTATTTTGGCTTGGTGTGTATGCTTTTCATTGTGTAAAATTGCTGTTCTTTTGCCAATTTAAGTGATTGTTTTGTTTACTGTAAGTTTGAAAATAAAAATTAAGAAAAAAATTCCAATTGACTGTGCTGTGGTTGGAGACTTTATTTACCAAGATGTTTACTCTTTCCTTTCCCCTCCCATTTTGAGGAGCTCTGTGACTCCTCCTCTTCCCCTAATGCTTTGTAGTCTCTTTTCTGTCATAATAAAGCTACATTTTCTCTGAAAA 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