| Retrocopy Name | Usp22P1 |
|
| Species | Rattus norvegicus | |
| Coordinates | chrX:15989319-15990168 UCSC | |
| Strand | + | |
| Parental Sequence | NM_001191644.1 | |
| Parental seq. overlap | 684 bp | |
| Parental seq. overlap (%) | 43.1% | |
| Genomic Region |
Intragenic (Usp27x) |
|
| Retrocopy Summary | Usp22P1, located on chrX:15989319-15990168, is a retrocopy of the parental gene Usp22. Retrocopies of protein-coding genes, also known as processed pseudogenes, are intriguing genomic elements with implications in genome evolution and diseases. While some retrocopies are non-functional, there are examples of retrocopies (retrogenes) acquiring regulatory roles or exhibiting neofunctionalization unrelated to their parental genes. |
| Gene Name | Usp22 |
| Full Name | ubiquitin specific peptidase 22 |
| Also known as | - |
| Coordinate | chr10:47429201-47453298 |
| Strand | - |
| Gene summary | Predicted to enable enzyme binding activity and nuclear receptor coactivator activity. Predicted to contribute to H4 histone acetyltransferase activity and thiol-dependent deubiquitinase. Predicted to be involved in positive regulation of mitotic cell cycle; positive regulation of transcription, DNA-templated; and protein modification by small protein conjugation or removal. Predicted to act upstream of or within protein deubiquitination. Predicted to be part of SAGA complex. Orthologous to human USP22 (ubiquitin specific peptidase 22). [provided by Alliance of Genome Resources, Apr 2022] |
| >Usp22P1 |
| CTACAAGTTACTGCACCTGGTGTGGATTCATGCTCGTCATCTAGCAGGGTACAGGCAACAGGATGCCCATGAGTTCCTCATCGCGGCCCTAGATGTCCTGCACAGGCACTGCAAGGGTGACGATGTTGGCAAGGTGGCCAGCAACCCCAACCACTGTAACTGCATCATAGACCAAATCTTCACAGGTGGCCTGCAGTCCGATGTTACCTGTCAAGCCTGCCATGGTGTCTCCACCACTATAGACCCATGCTGGGACATTAGTCTGGACTTGCCTGGCTCTTGTACATCCTTCTGGCCCATGAGTCCTGGGAGGGAGAGCAGCTTGAATGGAGAAAGCCACATACCAGGCGTTACCACCCTCACGGACTGCTTGCGGAGGTTTACAAGGCCAGAGCACTTAGGCAGTAGTGCCAAAATCAAGTGTGGTAGTTGCCAAAGCTACCAAGAATCTACCAAACAGCTCACTATGAAGAAGTTACCAGTAGTTGCCTGCTTTCATTTCAAACGATTTGAACACTCAGCGAAACAGAGGCGCAAGATCACGACGTACATTTCCTTCCCTCTGGAGCTGGATATGACACCATTTATGGCGTCGAGTAAAGAGACCCGGATGAATGGACAGTTGCAGCTGCCGACCAACAGTGGCAACAACGAGAATAAGTATTCCTTGTTTGCTGTGGTTAATCACCAAGGAACCTTGGAGAGTGGCCACTACACCAGCTTCATTCGGCACCACAGGGACCAGTGGTTCAAGTGTGATGATGCTGTAATCACCAAGGCCAGTATTAAGGATGTTCTGGACAGTGAAGGGTATTTACTGTTCTATCACAAACAGGTCCTGGAACATGAG |
| >NM_001191644.1 |
| ATGGTGGCCAGGCCCGAGCCTGAGGTCGAGGCCATGGACGCTGAGCTGGCGGTGGCGCCGCCAGGCTGCTCGCACCTGGGCAGCTTCAAGGTGGACAACTGGAAGCAAAACCTGCGGGCCATCTACCAGTGCTTCGTATGGAGCGGAACTGCCGAGGCTCGCAAGCGCAAGGCAAAGTCCTGTGTCTGCCATGTCTGCGGCATTCACCTGAACCGGCTGCACTCTTGCCTCTACTGTGTCTTCTTTGGCTGTTTCACGAAGAAGCACATCCATGACCATGCTAAGTCAAAGCGGCACAACCTGGCCATTGACCTGATGTATGGAGGTATTTACTGCTTCTTGTGCCAGGACTACATCTATGACAAAGACATAGAAATCATTGCCAAAGAGGAGCAGCGCAAGGCTTGGAAGATGCAAGGTGTTGGAGAGAAGTTTTCGACTTGGGAACCAACTAAACGAGAGCTGGAGCTGCTGAAGCACAACCCGAAGAGGCGGAAGATCACCTCCAACTGCACCATAGGTCTGCGTGGACTGATCAACCTGGGGAACACATGTTTCATGAACTGCATCGTGCAGGCGCTAACCCACACGCCGCTTCTGAGGGACTTCTTTCTGTCAGATAGGCACCGCTGTGAGATGCAGAGCCCCAGCTCCTGCCTGGTCTGCGAGATGTCCTCTCTCTTCCAGGAGTTTTACTCGGGGCACCGCTCCCCACACATTCCGTACAAGCTGCTGCACCTGGTGTGGACGCACGCCCGGCACCTGGCAGGTTATGAGCAGCAGGACGCCCATGAGTTCCTCATTGCAGCCCTGGACGTCCTCCACCGGCACTGCAAAGGTGATGACAACGGGAAGAAAGCCAACAACCCTAACCACTGCAATTGCATCATTGACCAGATCTTCACGGGTGGGCTCCAGTCTGATGTCACATGCCAGGTCTGCCATGGGGTCTCCACCACCATAGACCCCTTCTGGGACATCAGTTTAGACCTGCCCGGTTCTTCCACCCCATTCTGGCCCTTAAGCCCAGGGAGCGAGGGCAGTGTCGTCAATGGGGAGAGCCACGCGTCTGGGACCACCACTCTCACAGACTGCCTGCGAAGATTTACCAGACCAGAACACTTAGGAAGCAGTGCCAAGATCAAGTGTAGTGGTTGCCATAGCTACCAAGAGTCCACAAAGCAGCTCACCATGAAGAAGCTACCCATTGTGGCCTGCTTCCATCTCAAACGATTTGAACACTCAGCCAAACTTCGGCGGAAGATCACCACATATGTGTCTTTTCCCCTGGAATTGGACATGACGCCCTTTATGGCCTCCAGCAAAGAGAGCAGGATGAATGGGCAGTACCAGCAGCCCCTGGACAGTCTCAACAATGACAACAAATACTCCTTGTTTGCTGTCGTTAACCACCAAGGGACCTTGGAGAGTGGCCACTACACCAGCTTCATCCGGCAGCACAAAGACCAGTGGTTCAAGTGTGATGACGCCATCATCACCAAGGCCAGCATCAAAGATGTGCTGGACAGCGAAGGGTACCTGCTCTTCTACCACAAACAGTTCCTGGAATATGAGTAG |
| PMID - Link | Title |
|---|
