| Retrocopy Name | USP22P1 |
|
| Species | Choloepus didactylus | |
| Coordinates | chrX:51230082-51230864 UCSC | |
| Strand | + | |
| Parental Sequence | XM_037808598.1 | |
| Parental seq. overlap | 641 bp | |
| Parental seq. overlap (%) | 13.5% | |
| Genomic Region |
Intragenic (USP27X) |
|
| Retrocopy Summary | USP22P1, located on chrX:51230082-51230864, is a retrocopy of the parental gene USP22. Retrocopies of protein-coding genes, also known as processed pseudogenes, are intriguing genomic elements with implications in genome evolution and diseases. While some retrocopies are non-functional, there are examples of retrocopies (retrogenes) acquiring regulatory roles or exhibiting neofunctionalization unrelated to their parental genes. |
| Gene Name | USP22 |
| Full Name | N/A |
| Also known as | USP22 |
| Coordinate | chr18:485200-534700 |
| Strand | + |
| Gene summary | N/A |
| >USP22P1 |
| ACAGGATGCCCACGAGTTCCTCATTGCGGCATTGGATGTCCTGCACAGGCACTGCAAAGGTGATGATGTCGGGAAGGCGGCCAACAATCCCAATCACTGTAACTGCATCATTGACCAAATCTTCACTGGTGGCCTGCAGTCAGATGTCACCTGTCAAGCCTGCCATGGCGTTTCTACCACGATAGACCCATGTTGGGACATCAGTTTGGACTTGCCTGGCTCTTGCACCTCCTTCTGGCCCATGAgcccagggagggagagcagtgTGAATGGGGAAAGCCACATACCAGGAATCACCACGCTCATGGACTGCTTGCGGAGGTTTACAAGGCCCGAGCACTTAGGAAGCAGTGCCAAAATCAAGTGTGGTAGTTGCCAAAGCTACCAGGAATCTACCAAACAGCTCACCATGAATAAATTACCTGTTGTTGCCTGTTTTCATTTCAAACGATTTGAACACTCAGCCAAACAGAGGCGCAAGATCACTACGTACATTTCCTTTCCTCTGGAGCTAGATATGACACCATTTATGGCCTCAAGTAAAGAGAGCAGAATGAATGGACAGTTGCAGTTGCCAACCAATAGTGGAAATGAGAATAAGTACTCCTTGTTTGCTGTGGTTAATCACCAAGGAACCTTGGAGAGTGGCCACTATACCAGCTTCATCCGGCACCACAAGGACCAGTGGTTCAAATGTGATGATGCCGTCATCACCAAGGCCAGTATTAAGGATGTACTGGACAGTGAAGGGTATTTACTGTTTTATCACAAACAGGTCCTGGA |
| >XM_037808598.1 |
| GGGccgcgccccccgccccccgccccccgccgccCTGGCGTCGTCCTCGCCGCCCtcgccgcccccgccgccccccGCGCGCGGCCGGGCGCTGCCCCCCGCCGGGTCGCGGCCCGAGCCGGAGCCCGAGGCCATGGACGCCGAGCTGATGGCCTCCGCGCACGGCTGCTCGCACCTGAGCGCCTTCAAGGTGGACAACTGGAAGCAGAACCTGCGGGCCATCTACCAGTGCTTCGTGTGGTCCGGCACCGCCGAGGCCCGCAAGCGCAAGGCGAAATCGTGCGTCTGTCACGTGTGTGGGGTCCACCTGAACAGACTGCACTCGTGCCTCTACTGTGTCTTCTTCGGCTGCTTCACAAAGAAACACATCCACGAGCACGCAAAGTCGAAACGGCACAACCTGGCCATAGACCTCATGTACGGAGGTATATACTGCTTTTTGTGCCAGGACTACATATATGACAAAGACATGGAAATAATTGCCAAAGAGGAACAGCGGAAAGCTTGGAAAATGCAAGGCGTCGGAGAGAAGTTTTCCACGTGGGAACCAACCAAACGGGAGCTGGAGCTGCTGCGACACAACCCTAAGAGAAGGAAGATCACCTCCAACTGCACCATAGGTCTGCGAGGGCTGATCAACCTCGGGAACACCTGCTTCATGAACTGCATCGTGCAGGCCCTCACCCACACGCCGCTGCTGCGAGACTTCTTCCTCTCCGACAGGCACAAGTGCGAGATGCAGAGCCCCAGCTCATGTCTGGTCTGTGAGATGTCTTCGCTTTTTCAGGAGTTCTACTCGGGGCACCGGTCTCCCCACATCCCGTACAAGCTGCTGCACCTGGTGTGGACGCATGCGCGGCACCTGGCCGGCTACGAGCAGCAGGACGCCCACGAGTTCCTCATCGCCGCGCTGGACGTCCTCCACAGGCACTGCAAGGGGGACGACAGCGGGAAGAAGGCCGGCAACCCCAACCACTGCAGCTGCATCATTGACCAGATCTTCACCGGCGGGCTGCAGTCCGACGTCACCTGCCAGGACTGCCATGGCGTCTCCACGACAATAGACCCGTTCTGGGACATCAGTCTGGACCTGCCGGGCTCCTCTACCCCCTTCTGGCCTCTGAGCCCGGGGAGTGAGGGCAGCGTGGTGAATGGGGAGAGCCACGCCTCGGGGACTACCACCCTCACCGACTGCCTGCGCAGATTCACCAGACCTGAGCACTTAGGAAGCAGTGCCAAAATCAAATGCAGTGGTTGCCATAGCTACCAGGAATCCACGAAACAGCTTACCATGAAGAAATTGCCCATCGTAGCCTGTTTTCATCTCAAACGCTTTGAGCACTCAGCCAAGCTGCGGCGGAAGATCACCACATACGTGTCCTTCCCCCTGGAGCTGGACATGACCCCCTTCATGGCCTCCAGTAAAGAGAGCAGGATGAATGGACAGTACCAGCAGCCAGCGGACAGCCTGAATAATGACAATAAGTACTCCCTGTTCGCCGTGGTCAACCACCAGGGCACCCTGGAGAGCGGCCACTACACCAGCTTCATCCGCCAGCACAAGGACCAGTGGTTCAAGTGCGACGACGCCATCATCACCAAGGCCAGCATCAAGGACGTGCTGGACAGCGAGGGATACTTACTGTTCTATCACAAGCAGTTCCTGGAGTATGAGTAGCCGTTTCCAGCAGCTGGACAGAAGGGACAAAGGGGACACGCTGGCGAGCCTCACAGAATGTCGCCCTGACTCCCTGACCGGCCGGCACTGCCCCCGCCCCCATCGCCCCCACCCCACGTGTCGGCTCCTCTGCAGCTGGGCCTGGAGGAAGCGGGACCAGCCCCCAGGGGTCGTGTGGTTCGAAGGGACAAGCTCTGCGGGCTGGGGCGGGTGGGGCGGGAGTGCACGAAAGCAGCGGTTGGATAAAGGCACCTgcgggtgggaggggcggctccgtCGCGGTCACTCTGGGCTCTGCAGGCCTGTGGGGGGGACGGTGCCCGCAGCGGAGGGGCGTCCTCTCCTCGGAGCTCAGGCAGCTGCCGGGTGACGCACACATGGGCCGCTGAGGCAGAGGGTGCGGGAGCAGGATGGGGCGCAGTGCGTGTTGTGCTGGGGGGGGCGGCCTGCGGCCTGTGCTGCAACCTCAGCCCCAAGGGGCTGGAGCCCCTGACTCGGCTCCCACCAGCCGTGGGCGTgtgccgccccccaccccccaccccataatGGTGACTTTCATGTAGTAACTGTAAAGTGAGGATAACTGCGTTGAAACCGAGATgtagattttttcccttttactccGTGAGCCTTCCTTTTTAATTGCTCCTGTTGGTTGCTTCCTGTCCTCTCCTCTTTATACCCCCTAACCTCCCCTGGGAAACATTTGTGAGGCTGGTTGAAGCTGGGGAGGGGGTAGAGAGAATTGGGGGCAGCTCGTGAGCGTCTCTGTGTTCTGAAAACCATTTACGGGCTCGCAGCGCTTTCCCATGTGTCGTGCCGGTTCCCTTCCTCGGCTCTCTCCTCTATGTCTTCGGTCCTTCTGTCTCTGCTTGGCAGCAGGTGTGTGGGGTTCAGGGCTGCAGTGACCTCACTTGGAGACCCTGTGCTTCTGCTCTACATTTAGTGTAGTTTTAATTGTAGCAGGAAAAAAGACTTTATGAAATGAGCTGTCAGCAGGGCTCGGAGACGAAATAGAGTAGCATTAGTTTGTTCTTTGTGAGGTATCTTGCATGTATCTATCTATTCAAACCTTTACTTAGACTGTCCATTTCTGAGACACTTTTACATTAAGCCTCGGGATTTTAGAGGAAAGGTGATTGCAGTACAGGTTTTGAAGCAATCATCTCTCAAGCTGTGCTCGTCCTGGGAGCCCATTCTATAGCTGAACTGTCTTCAGTTCTGGAGAAGAGTAGAATCGTTTGTtgcaggggttggcaaacctTTCCGTAAAGAGCCGGTTCGTGCAGTCACTgctgttgtagcacaaaagcagccactgATGGGTCCAAAACAAAGGAGTGTGCCGTGACCCAGTGAAACAGTATTtatatggacactgaaattttaatttcacacAGTTTTCAAATGTCatggaatattttgattttttttaaccaattttaaaatgtgacgAGTATTCTTAGCTCACAGGCCAATGAAAAACAGACggcaggccagatttggctcACGGTCTATGGTTTGCCAACCTCTGATCTAGCAATAGCTAGTTAGGGGGAAGTGAGGGAAGAGGTGGTAACAAAAGGATTTGAGCAGGAAAAACACGAGGATACACAAAACAACTGCCATATGCTGCAGAATCATTACATGGCAAATTCTTCAGTGATTGAGTTTTGTAGATGCTTTCcaaatttattctgttatttcTGCTGTTAAAGAACAACACATTGAAGATGGCCGTCACCGTCAGAGAAACGAGGACAGGCCCAGGTTCTCAGAAGTGGCCCGAGGGACCGGTTCTGTGCCTCCTGGTGACTGTGCCGTGAAGGTTTCCCTTGCTGCTTTTTGGGGGTGGAGGAGAAGTGGCGTCTCTTAATCAGGAACAGACCCGACAGGAAGGAGAGTTGGCTTCGGTTGACCCGCAGACTCTGAGCTGCGTAGTCTTTTCCTGAATTCCGCCAGCCCGTGGCAGCCTGGCTGCTTCCTGCGGGTCCCTGTGGTTTGGCTCAGGGCCCCATTCTCCGTCCCCCCAGCCTCTGCATGTTCCCCCTTCCTAGTGCCTCTGCTCAGTGCCAGGCGCCCCGAGATCTTAGCCTTGGTGGCAGCCGGCGGCGCGGCACCAGTTTTTTGTAGGCTCTGTTCACCTGTTTTGTATCCACGTTAATTCTCCTGATTCACTTCGGCATCGGTGTTCTAAGCTCTTGATCGGATGGAGACGTCTTCAGACCGACTTCCCTGTCTGAACCGGGAGGTCCCTGGAATTGGCAGAGCGGCTGGTCCTGGGGGAGAACTGGGGGCACAGCCCCCGCCCTCCACCCATGAGGTCGGCTGGGTCGTGTTCAGTACATGATGTGATGGGTTTGGGAATTTCTTCCTTTTAGCTCCTATCCAACATCTAAGTTCTGGAAACCTCTTTTCCTGTTTGCTGGTAGCCACCCCTGTAGGTGCCCAGCCCCTCACAGTGGGCGCCTCAGCACCAAGGCCTCCCGGGTGCCCCACCCCTGCCGTGTGTTGAGAGTAAAGAGCACGTCTGCGCTTCGGCCGCCATTGCAGTGCTTTACGGGAGGGACGGACCCTCCCTGCAGGGTCTGAAGTCAGCGTCACGAGCAGGTGTGGGCGGCCGGGCCGTGGAAAGTGGACAGCCCCCAGCATGCCCTCTCGGACCCTCCTGGAAAGAGGTGGCCGAGGCCCCTGCTCCGGGTGCCATGTCCCCTGCCCCTCGCTGGGCTCTGGAACCGTCCCCGGACCTTCCCTCTCGCAGCGGCTTCCCTGCGACGTAAATGCCCGAGAGCGGTTGTGTCTTGGCTTGGTGAGTGTGCTCTTCATTGTGTAAAATCGCTGTTCTTTTGACAAGTCAAGTGactgttttggttactgtaaTTTGAAGACCAGAAATGGTAAGAAAAGGAACTTCGGCGACCGTGCTGTGTTGGATGCCGTATCCCCAGGatgctccctccttccttttcgcTGCCTGTGGAGCAGCTGTGtggctctttctccctcccttatTGGCTTGTAATCTTTCCTGTGTCGTAATAAAGCTACATTTTATTCTGAAA |
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