| Retrocopy Name | USP22P1 |
|
| Species | Equus caballus | |
| Coordinates | chrX:41358646-41359677 UCSC | |
| Strand | + | |
| Parental Sequence | XM_023653689.1 | |
| Parental seq. overlap | 852 bp | |
| Parental seq. overlap (%) | 18% | |
| Genomic Region |
Intergenic |
|
| Retrocopy Summary | USP22P1, located on chrX:41358646-41359677, is a retrocopy of the parental gene USP22. Retrocopies of protein-coding genes, also known as processed pseudogenes, are intriguing genomic elements with implications in genome evolution and diseases. While some retrocopies are non-functional, there are examples of retrocopies (retrogenes) acquiring regulatory roles or exhibiting neofunctionalization unrelated to their parental genes. |
| Gene Name | USP22 |
| Full Name | ubiquitin specific peptidase 22 |
| Also known as | - |
| Coordinate | chr11:61252198-61292984 |
| Strand | - |
| Gene summary | N/A |
| >USP22P1 |
| AATCAATCTTGGCAACACGTGCTTTATGAACTGCATCGTCCAGGCCCTTACCCATACTCCGATACTGAGAGATTTCTTCCTCTCTGACAGGCACAGATGTGAAATGCCAAGTCCCGAGTTGTGTCTGGTCTGTGAGATGTCTTCGCTTTTTCGAGAGTTGTATTCTGGAAACCCATCTCCTCACGTTCCCTATAAATTACTGCACCTGGTGTGGATCCATGCGCGTCATTTAGCAGGGTACAGGCAGCAGGACGCCCATGAGTTCCTCATTGCAGCGTTAGATGTCCTGCACAGGCACTGCAAAGGTGATGATGCCGGGAAGGCGGCCAACAATCCCAACCACTGTAACTGCATCATAGACCAAATCTTCACGGGTGGCATGCAGTCTGATGTCACCTGTCAAGCCTGCCATGGTGTCTCCACCACGATAGACCCGTGCTGGGACATCAGTTTGGACTTGCCTGGCTCTTGCACCTCCTTCTGGCCCATGAGCCCAGGGAGGGAGAGCAGTGTGAATGGGGAAAGCCACATACCAGGAATTACCACCCTCACGGACTGTTTGCGAAGGTTTACGAGGCCAGAGCACTTAGGAAGCAGTGCCAAAATCAAATGTGGTAGTTGCCAAAGCTACCAGGAATCCACCAAACAGCTCACAATGAATAAATTACCTGTTGTTGCCTGTTTTCATTTCAAACGGTTTGAACACTCTGCCAAACAGAGGCGCAAGATCACTACATATATATCTTTTCCTCTGGAGCTGGATATGACACCGTTTATGGCCTCGAGTAAAGAGAGCAGGATGAATGGACAGTTGCAGCTGCCAACCAATAGTGGAAACGACGAGAATAAGTATTCCTTGTTTGCTGTGGTTAATCACCAAGGAACCTTGGAGAGTGGCCACTACACCAGCTTCATCCGGCACCACAAGGACCAGTGGTTCAAGTGTGATGATGCTGTCATCACCAAGGCCAGTATTAAGGACGTCCTGGACAGTGAAGGGTATTTACTGTTCTATCACAAACAGGTCCTGGA |
| >XM_023653689.1 |
| CGGCCGGGCGCGCAGCGAGCAGTCCCCGCCGCGCTGGCGTCGTCCTCGCCGCCCTCGCCGCCCCCCGCGCGCGGGCGGGCCCTGCCGCCCATGGGCTCCCGGCCCGAGCCGGACAGCGAGGCCATGGACGCGGAGCTGGTGGTGACGCCGCCGGGCTGCTCGCACCTGGGCAGCTTCAAGGTGGACAACTGGAAGCAGAACCTGCGGGCCATCTACCAGTGCTTCGTGTGGAGCGGCACGGCCGAGGCCCGCAAGCGCAAGGCAAAGTCGTGCGTCTGTCATGTTTGTGGTGTCCACCTGAACAGGCTTCACTCTTGCCTCCACTGTGTCTTCTTCGGCTGTTTCACAAAGAAACATATTCATGAACATGCGAAGTCGAAACGGCACCACCTGGCCATAGAGCTTATGTATGGCGGTATCTACTGCTTTTTGTGTCAGGACTACATATATGACAAGGACATGGAAATCATTGCCAAAGAGGAGCAGCGGAAAGCTTGGAAAATGCAAGGCGTTGGAGAAAAGTTTTCAACTTGGGAACCAACCAAACGGGAGCTTGAACTGCTGAAACACAACCCCAAAAGGCGCAAGATCACCTCCAACTGCACCATAGGTCTGCGAGGGCTCATCAACCTTGGCAATACCTGCTTCATGAACTGCATCGTCCAGGCGCTCACCCACACGCCGCTGCTGCGAGACTTCTTCCTCTCTGACAGGCACAGGTGTGAGATGCAGAGCCCCAGCTCCTGCCTGGTCTGCGAGATGTCGTCACTTTTTCAGGAGTTTTACTCTGGGCACCGGTCCCCCCACATCCCGTACAAGTTGCTGCACCTGGTGTGGACTCACGCCCGGCACCTGGCAGGCTACGAGCAGCAGGACGCCCACGAGTTCCTCATCGCGGCCTTGGACGTCCTGCACCGGCACTGCAAAGGTGACGACAACGGGAAGAAGGCCAACAACCCCAACCACTGCAGCTGCATCATAGACCAGATCTTCACAGGCGGACTGCAGTCGGACGTCACCTGCCAGGTCTGCCATGGCGTCTCCACCACAATAGATCCCTTCTGGGACATCAGTTTAGATCTGCCTGGCTCTTCCACCCCCTTCTGGCCCCTGAGCCCAGGGAGCGAGGGTAGCGTGGTGAACGGGGAAAGCCACGTCTCAGGAACCACCACTCTCACGGACTGCCTGCGAAGATTTACCAGGCCAGAGCACTTAGGCAGCAGCGCCAAGATCAAGTGTAGCGGCTGCCATAGCTACCAGGAGTCCACCAAACAGCTCACCATGAAGAAACTGCCCATCGTGGCCTGTTTCCACCTCAAGCGATTCGAACACTCGGCCAAACTGAGGCGGAAGATTACCACATACGTGTCCTTTCCCCTGGAGCTGGACATGACCCCCTTCATGGCGTCCAGCAAAGAGAGCAGGATGAATGGACAGTACCAGCAGCCCATGGATAGTCTCAACAACGATAACAAGTACTCCTTGTTTGCCGTTGTTAACCACCAGGGGACCCTGGAGAGCGGCCACTACACCAGCTTCATCAGGCAGCACAAGGACCAGTGGTTCAAGTGTGACGATGCCATCATCACCAAGGCCAGCATCGAGGACGTGCTAGACAGTGAGGGGTACCTGCTGTTCTACCACAAACAGTTCCTGGAGTACGAGTAACCGCATCCGCAGCCGCTCAGCAAAGGAAGGCGATGAGTTGGCCCGCCTCTCAAGATGATCCCCCACTCCCCGACAGGACACTGCCACCCGCACAGAAGCGCCCCAGGAGTGTCAGGGCCGTGGCAGCCTGGCCAGAGACGGCCACAGTGGGTGCCCGGGTGGTCGACTGGACAAGCACTGCGGCCGGGCGAGGCTCCAGGAACCTCACGACCTGAAGGCTGTGCTCTGTGCGGGATGGGGCAGAGGAGATGAGTCATTGTGTCTCTCCTGTGCTCCTCAAGAGAGCGTGTGGGTGCCCTCCGCACAGGGCAGCCTTGTCCTGGTGCTTCTGCACAGCAGTGTGGAGCTGAAAAGGCGCCAGCCCATCCTAGAATTATGGATGCATTAGAGCAGTAGAGACAGAGATGCTGTGCAAGGACCAAGGGCTTTGCAAGTGTCTTTCTCTGTGTGAGTCTGCGTATGAAATCTACGTAGTGTGGAACTCTTAGCCTCCGTTTTATCAGCAGACATCAGGAACCCCCAGCACCTGTGAACGGAAGGTGCTCACTGGGGTTCGAGTCGCGTTGTTCTGCGGATGACATAGCGTCAGACTGCATGTGGAAGCGCCAGCCAGGTGTCTGTTGGATTTCTAAAAATAGGCGTTTTCTTATTCCCTCTTCTTCATCTTTTTCCATAGTGGTGAATTTCATAAATGTAATGATAGTGATGTGAATGAATTCTTGAGTTTATACTGAAATTTAGATAGTTTTCCCTTTATTCTCGAGAGTGAACTTGCTTTTGAATTGGTGCTGGTTTTGTTGCTTTCCGTCTCCCTCCCGTCTGGAAGCATCTGTGTCCTGGCCGAAGCTGGCAGGTGCAGCAGAGGATGGGGCTGCAGCTCACAACTGCTCTATCACAGTAGTCTTCGAAGTAAATGAAGTGTTTTTCAGTTGTTTCCTTGTATTTTTTTCCTGGCCTCCTGTCCCGCTGGCTGTCCCGTCACTGCTTGTTGGCCGGCTTGAGGCTGAGTGGCTTCCAGCGGAGCCACGCTTCATTGTGGAGCCTCTGCCCCACGTCCAGTGTCGTTGCAATTGTAGCAGGAAAAGATGACTCTGTGATGGAGCTTTGGGAAGAGCTGAGTGAGGAGATGAACACTTTGTTCCTTGTAAGATATCTTGCCTGCATGTATCTACTTAAACCCAAACTTAGATTGTCCATTTCTGAGAAATTACAACCCAGAGCCGTGGGGGAGGCAGTGTTGCTTTCCTATAGTTTGTGAACAAGCTGTGCTTGTCCTGGGAGCCAAGTCTGCGTCTGAGCTGTGGAGCATTTGTTCCTGGAGAAGAAGAGAGTCAGCTGTTGaagggtcagcaaacttttttcgtgaagagccagatagtaaatactttaggctttgtgggccgtatggtttctgtcctaggtaatatgtaaacaaatgagtgtggctgtgttctaataaagctttgtgtatggatgctgcaatttgaatttcatgggacttttcacatcctgatatgtatttttttctctatttaaaaatgtgtgacctattcttaggtgacaggacatagaaaaacagtcagtggaccagatctggctcATTAGATAGTTAAGTTAGGAGTTGAGTAGTTACTGCACAGCCTGGAAAATGCTAGAGTATGTGAATCAGCAATCATATGCTGCAGAATCATCATATATGGCAAAATCCTTAGTGATACAATTTTTTAAGCACTTGCACAGTTCATTCTCAGTTGTATTTCTGCATTTAAGGAGCGTAAGTTTTAAAGCATGTTTTCAAATAGCATTATCAGAGAAATATGGGTGGGTGCGAGCTTTCCGGAAATGTCCCCATTTGCCCAAGGGATGTGTGTGCGTGTGTGACTGTGCTGTGCTAAGTTCCTTTGGGGAGGTGCTGTCTTGTAATAAGGAACAAATCCAAGGGAAGGCAGAAGGGACTGAAGCGGGTCTGCAGAGCTCTGAGCCCGCAGATCTCCTCTGGTTTGCCACCTCGCTTTGCTGCAGGGCCTGGGTGCAAAGTGGGGGCAAAGCAGATGGATTGGCTGTGGGGTTTCCTGGCAGATTCCCTGTGGCCTGCCAGCCCTGCTTCCCCACATGTGTCTCCTCCCCTGCACCCCTTCCTGTCTCCTTTCGGGTTCAGGGGCTCAGCTGCTCTGAGCACAGGAGGACTGGGGAGAGACAGTGAGGCCGTGTTTATGTTTTATAGACATTAAACTTTTGTATCCAAATTAGTTCTCTTTATTCCCTTTGGCATTGGCATTCTAAGCACTTACCCCCCTCTCTGCTACTGAGAAGTTCTCCTGCGGCTGGCGCACTGCTTCAGGAGCCGCTGGTGCTGCACTGCCGGCCAGAGGGCCTGCCGTCGACGCGCTCGTCTGAGTTCATCGTGTTGGGAACAAAATATTACATGATGGGTTTGGGAATTTCTTTCCTTTTAGCTCCCAATCTGACTGTTAACTTCAGGAAAATGGTTTTCTTGTTTCCTAATAACTACCCCTGTGTCGGTTTTCCAATCATGACCAAGTACGTCTGACCACTAAGGAATCGTTGGTGACCCCCTCCACTCGCAGCAGTGTGTTTAAAATGTCCTGTGTTCCTGAGATGACGGCTGTCGTTTCAGCGCTTCACACTGGAACAGTGGACTCTCCCTCTGGTGTCTGAAGTGAGTTCCGAACAGTGTAAAGTGCCAGGAGAGTGGGGCCGGGGAGGTGGAGTGGCCAGGCCTCCCCTCCAGGCCGGGCGCCGGAGCAGCCCACGCCGCATCCACCTGTGCTGTTGTAGTCCAGCTTGGTGTGTGTGCTTTCATTACGTAAAATTGCTCTTCTCTGACAGTTAAAGCGACTGTTTCCTTGCTATAACCTTGAAAACAAAAATTGTTAGGAGAGGACTCCACTGATCATGCTGTGGACTTTATTGCCAAGACGTTTACACCTCCTTTCTCCCTGTCGTTTGGAGCAACTGTTTGACTCTACCTTCCACCCCAATGGCTTGTAGTCGTTCCTATGTCATAATAAAGCTACGTTTTATTCTGAAAA |
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