| Retrocopy Name | USP22P1 |
|
| Species | Pan troglodytes | |
| Coordinates | chrX:49519704-49520727 UCSC | |
| Strand | + | |
| Parental Sequence | XM_016930807.2 | |
| Parental seq. overlap | 845 bp | |
| Parental seq. overlap (%) | 16.1% | |
| Genomic Region |
Intergenic |
|
| Retrocopy Summary | USP22P1, located on chrX:49519704-49520727, is a retrocopy of the parental gene USP22. Retrocopies of protein-coding genes, also known as processed pseudogenes, are intriguing genomic elements with implications in genome evolution and diseases. While some retrocopies are non-functional, there are examples of retrocopies (retrogenes) acquiring regulatory roles or exhibiting neofunctionalization unrelated to their parental genes. |
| Gene Name | USP22 |
| Full Name | ubiquitin specific peptidase 22 |
| Also known as | - |
| Coordinate | chr17:30066084-30110114 |
| Strand | + |
| Gene summary | N/A |
| >USP22P1 |
| CATCAATCTTGGCAACACGTGCTTTATGAACTGCATTGTCCAGGCCCTCACCCACACGCCGATACTGAGAGATTTCTTTCTCTCTGACAGGCACCGATGTGAGATGCCGAGTCCCGAGTTGTGTCTGGTCTGTGAGATGTCGTCGCTGTTTCGGGAGTTGTATTCTGGAAACCCGTCTCCTCATGTGCCCTATAAGTTACTGCACCTGGTGTGGATACATGCCCGCCATTTAGCAGGGTACAGGCAACAGGATGCCCACGAGTTCCTCATTGCAGCGTTAGATGTCCTGCACAGGCACTGCAAAGGTGATGATGTCGGGAAGGCGGCCAACAATCCCAACCACTGTAACTGCATCATAGACCAAATCTTCACAGGTGGCCTGCAGTCTGATGTCACCTGTCAAGCCTGCCATGGCGTCTCCACCACGATAGACCCATGCTGGGACATTAGTTTGGACTTGCCTGGCTCTTGCACCTCCTTCTGGCCCATGAGCCCAGGGAGGGAGAGCAGTGTGAACGGGGAAAGCCACATACCAGGAATCACCACCCTCACGGACTGCTTGCGGAGGTTTACGAGGCCAGAGCACTTAGGAAGCAGTGCCAAAATCAAATGTGGTAGTTGCCAAAGCTACCAGGAATCTACCAAACAGCTCACAATGAATAAATTACCTGTCGTTGCCTGTTTTCATTTCAAACGGTTTGAACATTCAGCGAAACAGAGGCGCAAGATCACTACATACATTTCCTTTCCTCTGGAGCTGGATATGACGCCGTTTATGGCCTCAAGTAAAGAGAGCAGAATGAATGGACAATTGCAGCTGCCAACCAATAGTGGAAACAACGAAAATAAGTATTCCTTGTTTGCTGTGGTTAATCACCAAGGAACCTTGGAGAGTGGCCACTATACCAGCTTCATCCGGCACCACAAGGACCAGTGGTTCAAGTGTGATGATGCCGTCATCACTAAGGCCAGTATTAAGGACGTACTGGACAGTGAAGGGTATTTACTGTTCTATCACAAACAG |
| >XM_016930807.2 |
| GCAGCGCAGGCGGTCCGCAGCAGCCGCAGCTCGGGGGCGGCGCCTGCCCTGCAGCCTCCCCTCGGCGATCGCGCAGCCCCATCTTTGTCCGGCCTCTGCGCTTTGTTCTCGGCGCCCGTGTCTTGGCCGGCCTGgccagcggccgagcagcccccacgccgcgctggcgtcgtcctcgcctccctcgccgccgccccccgcgcgcggccgggccttgccCCCCATGGTGTCCCGGCCAGAGCCCGAGGGCGAGGCCATGGACGCCGAGCTGGCGGTAGCGCCGCCGGGCTGCTCGCACCTGGGCAGCTTCAAGGTGGACAACTGGAAGCAGAACCTGCGGGCCATCTACCAGTGCTTCGTGTGGAGCGGCACGGCTGAGGCCCGCAAGCGCAAGGCCAAGTCCTGTATCTGCCATGTCTGTGGCGTCCACCTCAACAGGCTGCATTCCTGCCTCTACTGTGTCTTCTTCGGCTGTTTCACAAAGAAGCATATTCACGAGCATGCGAAGGCGAAGCGGCACAACCTGGCCATTGATCTGATGTACGGAGGCATCTACTGTTTTCTGTGCCAGGACTACATCTATGACAAAGACATGGAAATAATCGCCAAGGAGGAGCAGCGAAAAGCTTGGAAAATGCAAGGCGTTGGAGAGAAGTTTTCAACTTGGGAACCAACCAAACGGGAGCTTGAACTGCTGAAGCACAACCCGAAAAGGAGAAAGATCACCTCGAACTGCACCATAGGTCTGCGTGGGCTGATCAACCTTGGGAACACGTGCTTCATGAACTGCATCGTGCAGGCCCTGACCCACACGCCACTTCTGCGGGACTTCTTCCTGTCTGACAGGCACCGCTGTGAGATGCAGAGCCCCAGCTCCTGTCTGGTCTGTGAGATGTCCTCACTGTTTCAGGAGTTTTACTCTGGACACCGGTCCCCTCACATCCCGTATAAGTTGCTGCACCTGGTGTGGACCCACGCGAGGCACCTGGCAGGCTACGAGCAGCAGGACGCCCACGAGTTCCTCATCGCGGCCCTGGACGTGCTCCACCGACACTGCAAAGGTGATGACAATGGGAAGAAGGCCAACAACCCCAACCACTGCAACTGCATCATAGACCAGATCTTCACAGGTGGATTGCAGTCAGACGTCACCTGCCAAGTCTGCCATGGAGTCTCCACCACCATCGACCCCTTCTGGGACATCAGCTTGGATCTCCCCGGCTCTTCCACCCCATTCTGGCCCCTGAGCCCAGGGAGCGAGGGCAACGTGGTAAACGGGGAAAGCCACATGTCGGGAACCACCACGCTCACGGACTGCCTGCGACGATTCACCAGACCAGAGCACTTGGGCAGCAGCGCCAAGATCAAGTGCAGCGGTTGCCATAGCTACCAGGAGTCCACAAAGCAGCTCACTATGAAGAAACTGCCCATCGTAGCCTGTTTTCATCTCAAACGATTTGAACACTCAGCCAAGCTGCGGCGGAAGATCACCACGTATGTGTCCTTCCCCCTGGAGCTGGACATGACCCCTTTCATGGCCTCCAGCAAAGAGAGCAGGATGAATGGACAGTACCAGCAGCCCACGGACAGTCTCAACAATGACAACAAGTATTCCCTGTTTGCTGTTGTTAACCATCAAGGGACCTTGGAGAGTGGCCACTACACCAGCTTTATCCGGCAGCACAAAGACCAGTGGTTCAAGTGTGACGATGCCATCATCACCAAGGCCAGCATCAAGGACGTCCTGGACAGCGAAGGGTACTTGCTGTTCTATCACAAACAGTTCCTGGAATACGAGTAGCCTTACCTGCAGCTGGTCAGAAAAACAAAGGCAACGCATTGGCAAGCCTCACAAAATGATCCTCCCTGCCCCCCCCTCCCCCAAGCCTCCCGCCGCCTCCCCGGCCTGGTGACACCACCTCCCGTGCAGATGTGGCCCCTCTGCACCTGGGACCCATCGGGTCGGGATGGACCACACGGACGGGGAGGCTCCTGGAGCTGCTTTGAAGATAGATGAGATGAGGGGTGTGCTCTGGGTGGGAGGAGCAGCGTACACCCGTCACCAGAACATCTCTTGTGTCATGACATGGGGGTGCAACGGGGGCCTCACAGCACAGAGTGACCGCTGCCTGGCGTTCCCCAGCACTCGGTGTGGAAAGGCCCCTACCTGCTGTAAGATTATGGGTCCATGAAAGCAGTAAGCTGAAGACACAGAGGTGTAGTGTGCGGGACAGAGGGCCTTGCAGATGCCTTTCTGTTGGTGTTTTAGTGTTAAAATACGGAGAGTATGGAACTCTTCACTTCCATTTTCTCAGCGGCTGTGAAGCAGCCTCCTAGCTTCGGAAGTACGGACACTACGTCGCGTTTTCAAGCGTGTCTGTTCCGCAGGTAATTTAGCATCAAGCTGCACGTGGAAGCATCTCGCGGTTTTCTAGAAACAGGCATTTTCTTATCCCTCTCCCGCTCCTTTTTCCACAAAGATGAATTTCATAAATGTAATACTAGTAAAGTGAATGAATTACTGAGTTTATACAGAAATTTAGGTAACTTCTCCTTTAGTCTCGAGAGGGAGTCTTGCTTTTTAATGGGTGCCGTTTATGTTGCTGCCCGCCCTGTGTGCCTGGCTCCTCTGGGTGCCTTGGTGTCTGCTGGTGGCTGGCAGTGGGCGCAGCGGAGGAGAGTTGTGCTGCAGCTCATACGGTGTCTCTGTCATCTCAGTCTGGAGTAAATGCAGCGTCTGCCGGTGTCTGATGGGTTCTGTCCCTCGTATTTTCTTTGCCTTCTATCCCATTGCCTGGCTACCGCTGCCTGGCAGCCAAGGGTGTTGGTCGCGAAGCTGGAGTGGCCTCTGGTGGAGCCTGCATCTTGTCTCGTCTGCCTCTGCTTTACATTTGGTGTACTTTTGGGCATGGTGGCAGTAAAATGACATCGTGATTGAGCTTGTCAGCAGAGCTGAAAGAGAAAGTAGAAGGATGTGCATTGTTTCTTGTAAGATATCTTGCATGTATCTGTGTATTCAAATTCAAACAGAGATGGTTTGTCCATTTGTCCACTGAGAAATTATAAACTAGGGACAAGGGGGAGGAAAAGTACTGAAATACAGTTTATGAAGCAAGTGTGTCTCGGGCTGTGCTTGTCCCAGGAGCCCCAGCAGCATCTGAACTGAGGCTTCTTCAGTCCTGCAGGAACAGGATCATCTGTCTcagcggtgggcagatgttttcatagacagccagggagtaaacactgttggctctgtgggctgtatggtctctgccataaatagtacagagatgtggctgtgtctagtacaacttttagacacagaaatctgaatgacatatattgttccgtgtcaagaaacttagatttttttttttaactatttaaaaacgtgaaacctattcttagctcacaggccatggagaagctggtggggaccagaCCCAGCTCCTTAGCTGGCTGGGCTGGGGAGGGGGCAGTGACAGTGGCAGCTGCTACTCACTGCTCAGTGTGGAAAACACAGGACTTGGCAATCACAGCCCGCAGAACCATCATGTGTGGTAGAAGCCTGAGGGATGCGGTTTCTTGCCCACGTGCTCTGTTCATTTTCTGTTGTTTTTCTGCATTTAAAGAATTCACATGGAAGCATGTTTTATAAAATGAATTACCAGAGAAACAGAGATGGGCCGAGATTTTCAGAAATGGCCCCATGTGACCAAGTTCTGCTGTTTGGGTGACATTGCTTTGAAGATCTCCTTTGAGGATGTGCAGTCtttttttttttttttttttttttttgagatggagttttgctcttgttgcccaggctggagtgagtggcacagtctcggctcactgcaacctccacctcctgggttcaagcagttctcgtgccgcagcctcccaagtagctgggactacaggcatgtaccaccacgccaggctaatttttgtatttttagtagagatggggtttcaccatgtctcaaactcctgacctcaggcgatccacccacctcagcgtcccaaagtgctgggattataggcgtgagccaccgcgcctggccTATGAGCGGTCTTTTAATCAGGAACAAATCTAATGGAAAGGAGAGTTGACTGAAGTTGGCCCACAGGATTGTGAGCTGGGCAGTGCCTTCATGAAGGCTTGCCACCTTGGGACGCCCCGGTTTACTGGGGTGTCTTGCGGAGTGCAGAAGGCTTTCTGGCAGCTGCCTGGGTTTGGCCAGACCCTGCCTCCCCTCCCGCCGGCCAACCCCTAGTCCCCTTCCTGTCTCCACTTGCATTCAGGGGTGGCTGCTGTTCTGAGAACATTAGAACTGGGAAGAGAGATGGAGTCACATGGATTTTTGGTGGGCATTATTCTAAACTTTTGTATCCAAGTTAGTCCCCCTTATTCCACTGTGGCATTGCCGTTCTAAGCAGTTACCTGATGCCTGCTGCTGAAGAGCTGCTCACAGGAGGCGGCGGCGGCCCTGGCACTACCCCTTGCATTAGGTCTTGTGTTTGATGTGTTCTTGTGAATTTACTTTGTCAGAACAAAATATTTACGCGTTGGGTTCAGGAATTTCTCTTTTTAGCTCCCCATCTGGCTGTGAAATTCAGGAAACCTCCCGTTGCCTAATAATCACCCCATGTAGGTGTACATTGTGACAAAGTGCATCTGACCACTAAGGGGCCCCCTCGGTGACCCCAACACATTCACAGCAGTGTTAAAATGGCCTGCGTTTCGGAGATGCTGGCTGGCCTTTCAGTGCCTCCCAGGAAGACACATGGCCTTTCCCTCTTCAGATGCCTGAAGGGAGTGCTTTGAGGCAGGTGATGTGCTGGGAGTGTGGGCGGCCTCCCTCCGGCCCCGGGGCCCTCTGTGGACCTTGGCTCCCTCCGTGGACCTGGGCTTCGTGGTGAGCACTGCAGCCTCCCTGGGCGTTCCCTCCAGCGCCAGCACCACTGCAACATACAGACCTGAGTGCTATTGTATTTTGGCTTGGTGTGTATGCTCTTCATTGTGCAAAATTGCTGTTCTTTTGACAATTTAAGTGATTGTTTTGTTTACTGTAAGTTTGAAAATAAAAATTAAGAAAAAAATTCCAATGACTGTGCTGTGGTTGGAGACTTTATTTACCAAGATGTTTACTCTTCCTTTCCCCTCCCATTTTGAGGAGCTGTGTCACTCCTCCTCCCCCCCCAGTGCTTTGTAGTCTCTCCTATGTCATAATAAAGCTACATTTTCTCTGA 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