| Retrocopy Name | Usp22P1 |
|
| Species | Mus musculus | |
| Coordinates | chrX:7239828-7240618 UCSC | |
| Strand | - | |
| Parental Sequence | NM_001004143.4 | |
| Parental seq. overlap | 640 bp | |
| Parental seq. overlap (%) | 14.4% | |
| Genomic Region |
Intergenic |
|
| Retrocopy Summary | Usp22P1, located on chrX:7239828-7240618, is a retrocopy of the parental gene Usp22. Retrocopies of protein-coding genes, also known as processed pseudogenes, are intriguing genomic elements with implications in genome evolution and diseases. While some retrocopies are non-functional, there are examples of retrocopies (retrogenes) acquiring regulatory roles or exhibiting neofunctionalization unrelated to their parental genes. |
| Gene Name | Usp22 |
| Full Name | ubiquitin specific peptidase 22 |
| Also known as | - |
| Coordinate | chr11:61042607-61065885 |
| Strand | - |
| Gene summary | Enables thiol-dependent deubiquitinase. Acts upstream of or within protein deubiquitination. Predicted to be located in nucleus. Predicted to be part of SAGA complex. Is expressed in several structures, including alimentary system; central nervous system; eye; genitourinary system; and respiratory system. Orthologous to human USP22 (ubiquitin specific peptidase 22). [provided by Alliance of Genome Resources, Apr 2022] |
| >Usp22P1 |
| GCAGCAGGATGCCCACGAGTTCCTCATCGCTGCGCTAGATGTCCTGCATAGGCACTGCAAAGGTGACGATGTTGGCAAGGTGGCCAGCAACCCCAACCACTGTAACTGCATCATAGACCAAATCTTCACAGGTGGCCTGCAGTCCGATGTCACCTGTCAAGCCTGCCATGGTGTCTCCACCACTATAGACCCATGCTGGGACATTAGTCTGGACTTGCCTGGCTCTTGCACATCCTTCTGGCCCATGAGCCCTGGGAGGGAGAGCAGTTTGAATGGCGAAAGCCACATCCCAGGCATCACCACTCTCACGGACTGCTTGCGAAGGTTTACAAGGCCAGAGCACTTAGGAAGTAGTGCCAAAATCAAGTGTGGTAGTTGCCAAAGCTACCAAGAATCTACCAAACAGCTCACTATGAAGAAGTTACCAGTAGTTGCCTGCTTTCATTTCAAACGGTTTGAACACTCAGCGAAACAGAGGCGCAAGATCACTACGTACATTTCCTTTCCTCTGGAGCTGGATATGACACCATTTATGGCGTCAAGTAAAGAGACCCGGGTGAATGGACAGTTGCAGCTCCCAACCAATAGTGCGAACAACGAGAATAAGTATTCCTTGTTTGCTGTGGTTAATCACCAAGGAACCTTGGAGAGTGGCCACTACACCAGCTTCATTCGGCACCACAGGGACCAGTGGTTCAAGTGTGATGATGCCGTAATCACCAAGGCCAGTATTAAGGATGTGCTGGACAGTGAAGGGTATTTACTGTTCTATCACAAACAGGTCCTGGAAC |
| >NM_001004143.4 |
| GCCCAGCCTCGCCCCGCCCTCCTCGAAGTCAGAGGGTGCTGCGCGTGCGGTGGGTGCTGCTGTAGCCTGCCTGAGTTCTCAACGCGGTCTTTGTCCCCCAGCTTTGTTCTCGCCGCCCTGGCGTCGTCCTCGCCCCCGTCGCCGCCTGCCCCGCGCGCCCGGGCCTTGCCCGCCATGGTGGCCAGGCCGGAGCCTGAGGTCGAGGCCATGGACGCTGAGCTGGCGGTACCGCCGCCTGGCTGCTCGCACCTGGGCAGCTTCAAGGTGGACAACTGGAAGCAAAACCTGCGGGCCATCTACCAGTGCTTCGTGTGGAGCGGAACTGCCGAGGCTCGCAAGCGCAAGGCAAAGTCCTGTGTCTGCCATGTCTGCGGCATCCACCTGAACCGGCTGCACTCTTGCCTCTACTGTGTCTTCTTTGGCTGTTTCACGAAGAAGCACATCCATGACCATGCCAAGTCAAAGCGACACAACCTGGcCATCGACCTGATGTACGGAGGTATTTACTGCTTCTTGTGTCAGGACTACATCTATGACAAAGACATAGAAATCATTGCCAAAGAGGAGCAGCGCAAGGCTTGGAAGATGCAAGGTGTTGGAGAGAAGTTTTCAACTTGGGAACCAACTAAACGGGAGCTGGAACTGCTGAAGCATAACCCAAAGAGGCGGAAGATCACCTCCAATTGTACCATAGGTCTGCGTGGACTGATCAACCTGGGGAACACGTGTTTCATGAACTGCATCGTGCAGGCGCTGACCCACACTCCGCTCCTGAGAGACTTCTTTCTGTCGGATAGGCACCGCTGTGAGATGCAGAGCCCCAGCTCCTGCTTGGTCTGTGAGATGTCCTCTCTCTTCCAGGAGTTTTACTCAGGGCACCGCTCCCCACACATTCCATACAAGCTGCTGCACCTGGTGTGGACGCACGCCCGGCACCTGGCGGGTTATGAGCAGCAGGACGCACATGAGTTCCTCATTGCAGCCCTGGACGTCCTCCACCGGCACTGCAAAGGTGATGACAATGGGAAGAAAGCCAACAATCCTAACCACTGCAATTGCATCATTGACCAGATCTTTACGGGTGGGCTCCAGTCTGATGTTACATGCCAAGTCTGCCACGGGGTCTCCACCACCATAGACCCCTTCTGGGACATCAGTTTAGACCTTCCCGGTTCTTCTACCCCATTCTGGCCCTTGAGCCCAGGGAGCGAGGGCAGTGTGGTTAATGGGGAGAGCCATGCATCCGGGACCACCACTCTCACAGACTGCCTGCGAAGATTTACCAGACCAGAGCACTTAGGAAGCAGTGCCAAGATCAAGTGTAGCGGTTGCCATAGCTACCAAGAGTCCACAAAGCAGCTCACCATGAAGAAGCTGCCCATTGTGGCCTGTTTCCATCTCAAACGATTTGAACACTCAGCCAAACTTCGGCGGAAGATCACCACATATGTGTCttttcccctggaactggacatgACGCCCTTCATGGCCTCCAGCAAAGAGAGCAGGATGAATGGGCAATACCAGCAGCCCCTGGACAGTCTCAACAATGACAACAAATACTCCCTGTTTGCTGTCGTTAACCATCAAGGGACCTTGGAGAGTGGCCACTACACCAGCTTCATCCGGCAGCACAAAGACCAGTGGTTCAAGTGTGATGACGCCATTATCACCAAGGCCAGCATCAAAGATGTACTGGACAGTGAAGGGTACCTACTCTTCTATCACAAACAGTTCCTGGAATACGAGTAGCCTCCTGCCTTGCTggccagagaaagagagagagagagaaagagagagagagcaagttgGCAAACTTCCCGACATGATCCCTGCTCCCCCCAAATCAGAACACCATGGCATTCCTCCTATGCAGGCAAGCCTCCCTCATGGCCTGCACTAGGAGATGTGTCAGGTGGGATGAGCAGAGTGGAGTGCGCCCTTGGTGGAAAggagctgcctccccagcacctgtCCTTTGAGCCTTGTAGGCAGGGGATGGATGTCTTCAGAGCAGACCAACCACTCTGCCTGCTGCTTCACCCTGCCATCCCACCTGCCTCCTTGAAAATGAGCCCGTCAAAGCTGTAGAGTGGGCAGAGATGATGCCAGAGGGCAGAGTGCTTGCAGCAGCAGCCCTCTGGCATGAAGGGCAGAGGGTATGTCTCTTCTTTCTAAAATTGTAAGATAGCCCCAGGCCCAGGTTGAGGCCACCCACAGGCTACAAATACATCTGTCCTACAGATAACTTAGCATCAACTGCATGTGGAAACATCGGCTCAGACGTTCcctttgttttctagaaataggTGTCGTCTTACCTCTACCCCATTTGCTCTTTTTCCACGGTGGTGAGTTTCCTAAACGTGATAGTAGTGAAGTGAATGATTATCAAGTTATACGGAATTCTAGATGATTCTCTCCCCTCTGAGAGCGTGTCTTGCTCTTTTGATCAGTGTTGTTTCCTTGCCCTGTGCCCTGCCTTCCTTCTCAAACGGCTGGTGGCCAGGCAGATATCAGAGTCCCTGGTATCTTGATCTTTGCAGTAGATTCCTTGGTGGCTCCATTGACCCAATCCTCCCATGTTTCTTCTTGGTCTTTTTGCCTGCCCAGGGAGGTTTAGTGACTGTGTGAGATTTGAAGCTGAGGTCCAGTTGGAGACTGCATTGCATAGTGTCACCCGCTTGCCTCCATTCTGTGTTCACTATAGTTTCAGTTACAGCCAGAATAGGAAGGCTCCATTACCAGTTCTCCTGGCAGGGTCATTCATGAAGTTTATTGTAAGATATTTTGCATGTATCTCTGGACAAGCCTAGGCTGTCCACTTCTGAGCAACTGGAATCTAGGGTCTTGGTGTTTCTCCTCATACCACTGCCTTTCCAGTGGTGCTTACCCAGGAGCCTGTTGGCACCCACCCAGGAGTTGCCCATCAGAACAGGCAACTATTTCCTAAGAGCCAGGCTCTGAGCCGTAGACCCATAGCAGGTAACACGTGCATCGTGTTTGCATAACAAGTACGGCTGTGATTTAAATTACATATAATTATGTGtacagatactttttttttttttttttttactatttgaaAATAAGATTTTGTTTTTTCACTTACAGGCTATAAAAGAGCAGTACAGGGCCCAGCCCAGCTCCTTAGCTAGCGAATTGCGATGGAATGACATAGCTGTGGCAAAACTAAGCGGCCGCTGCTCAATCGGTGTGAAAATCACTCGAGGTCAGGGGCAGCAGAAACTTTGTCACGTGGTAACAGTTGCCCTGTTCTTCTCTAGTGTGTTTCTATTTCTGCATTTAAGTAAAGAACAGACTTGAAGCATGTTTTAGAAAAATCCTCTTTTGAGTACAGCTGAGCCTAGATTCTCAGACATGGACCATGTTTGTGGGACTCTACTGTGGAGATGCCCCAGGGTCAGCATGTTGTATTTGTGAACAAGTCCACATGAAAAACTTCACTGCAGTTGCCACGGGAACCAGAGCTCCAAGCTTCCTGAAGGTCTGCCTCCTTGACACTCCAGTGAATGGGGCATCCAGAACAGGGGAGATGAGCAGGTGTGCTGGCCAGGCCTGCCTCCTCTGTCCCCACAGAACACGACCCATTTCTTCCTATATTTGGGGCACTAAGGAGGACAGCAGCTGTTTTCTGTCAATGTGACTTTAACCTTTTATATCCGAAAGCATTCTCCTTCACCATGGTTTTAACATTCTAAACACTTCACTCTGTACCTGTAGCAAGGTCTGCCAACTCTATGGCTGCCGCACATGCATCTggccctccctctctgtcctggGGTCCTCAGCGTGCTGTCTCCACTGGACAGGCATGTGTGGATGGCTAAGGAACAGTTTATTTGAGCAATGGGCTTGGTTCTTTCAGTTGCCCCTCTGGATAGCAAGGCAGGAAAAGGGTTCCTCATCCTAGAACCACCTAGTATATGTGCTCAGATGGTCACAGAAGTGCATCTCACCACAGGGCTGCATTGCCTACCCCTCTCTTCCATACACTGCTGGCGCCAGCTTGACAGGAGACTAAAGTCCTCTTCaaatggcctcagtgagagagtagGGCATTGGGATGGATTCTGCAGTTCCTCTCTTTACCCCAGAAGTCCCCTCAAGCTGGGCACTACCTGAGTGTCCTACACCATGTGAACCTGAGTGCTGTTGTATTCGGCTCAGTGTGTATGCTTTTCCTTGTGTAAAATCATTGTTCTTTTTGACAAGtggtttgtttcatttattatagctttgaaataaaaaatcgtgagggaaaaaaaatccaatgatTGTACTGTGGTTAGGAGTTTTATTACCAAGACATTTATGTCACTTTTCTTTCCCTTGTCATTTTGAGGGGCTATTTGACTCCTCCCTAATGGCTTTTAGTCTTTCCTATATCATAATAAAGCTGCATTTTATTCTGAAACCTG |
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