| Retrocopy Name | HPCAL4P2 |
|
| Species | Sus scrofa | |
| Coordinates | chr6:89190960-89191166 UCSC | |
| Strand | + | |
| Parental Sequence | NM_001123043.1 | |
| Parental seq. overlap | 175 bp | |
| Parental seq. overlap (%) | 30.4% | |
| Genomic Region |
Intragenic (HPCA) |
|
| Retrocopy Summary | HPCAL4P2, located on chr6:89190960-89191166, is a retrocopy of the parental gene HPCAL4. Retrocopies of protein-coding genes, also known as processed pseudogenes, are intriguing genomic elements with implications in genome evolution and diseases. While some retrocopies are non-functional, there are examples of retrocopies (retrogenes) acquiring regulatory roles or exhibiting neofunctionalization unrelated to their parental genes. |
| Gene Name | HPCAL4 |
| Full Name | hippocalcin like 4 |
| Also known as | HPCL4 |
| Coordinate | chr6:95502679-95515892 |
| Strand | - |
| Gene summary | N/A |
| >HPCAL4P2 |
| GAGAACACGGAGTTCTCGGAGCTGGAGCTGCAGGAGTGGTACAAGGGCTTCCTCAAGGACTGCCCCACAGGCATCCTCAACGTGGACGAGTTCAAGAAGATCTACGCCAACTTCTTCCCCTACGGCGACGCCTCCAAGTTCGCCGAGCATGTCTTCCGCACCTTCGACACCAACAGCGACGGCACCATCGACTTCCGGGAGTTCATC |
| >NM_001123043.1 |
| ATGGGGAAGACCAATAGCAAGCTGGCCCCAGAGGTGCTGGAAGACCTGGTTCAGAACACCGAGTTCAGCGAGCAGGAGCTGAAGCAGTGGTACAAGGGCTTCCTGAAGGACTGCCCCAGCGGCATCCTCAATCTGGAGGAGTTCCAGCAGCTCTACATCAAGTTCTTCCCGTACGGCGACGCCTCCAAGTTTGCGCAGCACGCTTTCCGCACCTTCGACAAGAATGGCGACGGCACCATCGATTTCCGGGAGTTCATCTGTGCCCTTTCGGTCACCTCCCGCGGCAGCTTCGAGCAGAAACTCAACTGGGCCTTTGAGATGTACGACCTGGACGGCGACGGGCGCATCACGCGCCTCGAGATGCTGGAGATCATCGAGGCTATCTACAAGATGGTGGGCACCGTGATCATGATGCGCATGAACCAGGATGGGCTCACACCCCAGCAGCGTGTGGACAAGATCTTCAAGAAGATGGACCAGGACAAGGATGACCAGATTACACTGGAGGAGTTCAAGGAGGCGGCCAAGAGTGACCCGTCTATTGTGCTGCTGCTGCAGTGTGACATGCAGAAGTAG |
| PMID - Link | Title |
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