| Retrocopy Name | HPCAL4P1 |
|
| Species | Rhinolophus ferrumequinum | |
| Coordinates | scaffold_m29_p_9:22446592-22446781 UCSC | |
| Strand | + | |
| Parental Sequence | HPCAL4_x2 | |
| Parental seq. overlap | 160 bp | |
| Parental seq. overlap (%) | 27.8% | |
| Genomic Region |
Intragenic (HPCA) |
|
| Retrocopy Summary | HPCAL4P1, located on scaffold_m29_p_9:22446592-22446781, is a retrocopy of the parental gene HPCAL4. Retrocopies of protein-coding genes, also known as processed pseudogenes, are intriguing genomic elements with implications in genome evolution and diseases. While some retrocopies are non-functional, there are examples of retrocopies (retrogenes) acquiring regulatory roles or exhibiting neofunctionalization unrelated to their parental genes. |
| Gene Name | HPCAL4 |
| Full Name | N/A |
| Also known as | NULL |
| Coordinate | scaffold_m29_p_9:27736458-27748133 |
| Strand | - |
| Gene summary | N/A |
| >HPCAL4P1 |
| AGAGCTGGAGCTGCAGGAGTGGTACAAGGGCTTCCTCAAGGACTGCCCCACCGGCATCCTCAATGTGGATGAGTTCAAGAAGATCTACGCCAACTTCTTCCCCTACGGTGACGCCTCCAAGTTCGCTGAACACGTCTTCCGCACCTTCGACACCAACAGCGATGGCACAATCGACTTCCGGGAGTTCATC |
| >HPCAL4_x2 |
| ATGGGGAAGACCAACAGCAAGCTGGCCCCAGAAGTGCTGGAGGACCTGGTTCAGAACACCGAGTTCAGCGAGCAGGAGCTGAAGCAGTGGTACAAGGGCTTCCTGAAGGACTGCCCCAGCGGCATCCTCAACCTGGAGGAGTTCCAGCAGCTATACATCAAgTTCTTTCCCTACGGCGACGCCTCCAAGTTTGCGCAGCACGCTTTCCGCACCTTCGACAAAAACGGCGACGGCACCATCGATTTCCGGGAGTTCATCTGCGCCCTTTCGGTCACCTCCCGCGGCAGCTTCGAGCAGAAACTCAACTGGGCCTTTGAGATGTACGACCTGGACGGCGACGGGCGCATCACGCGCCTGGAGATGCTGGAGATCATTGAGGCTATCTATAAGATGGTGGGCACCGTAATCATGATGCGCATGAACCAGGACGGGCTCACACCCCAGCAGCGTGTGGACAAGATCTTCAAGAAGATGGACCAGGATAAGGATGACCAGATTACTCTGGAAGAGTTCAAGGAGGCGGCCAAGAGTGACCCATCCATTGTTCTGCTGCTGCAGTGTGACATGCAGAAGTAG |
| PMID - Link | Title |
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