| Retrocopy Name | HPCAL4P1 |
|
| Species | Papio anubis | |
| Coordinates | chr1:31071300-31071584 UCSC | |
| Strand | + | |
| Parental Sequence | XM_003891639.4 | |
| Parental seq. overlap | 235 bp | |
| Parental seq. overlap (%) | 4.8% | |
| Genomic Region |
Intragenic (HPCA) |
|
| Retrocopy Summary | HPCAL4P1, located on chr1:31071300-31071584, is a retrocopy of the parental gene HPCAL4. Retrocopies of protein-coding genes, also known as processed pseudogenes, are intriguing genomic elements with implications in genome evolution and diseases. While some retrocopies are non-functional, there are examples of retrocopies (retrogenes) acquiring regulatory roles or exhibiting neofunctionalization unrelated to their parental genes. |
| Gene Name | HPCAL4 |
| Full Name | N/A |
| Also known as | - |
| Coordinate | chr1:37899866-37912722 |
| Strand | - |
| Gene summary | N/A |
| >HPCAL4P1 |
| GAGAACACGGAGTTCTCAGAGCTGGAGCTGCAGGAGTGGTACAAGGGCTTCCTCAAGGACTGCCCCACAGGAATCCTCAACGTGGACGAGTTCAAGAAGATCTACGCCAACTTCTTTCCCTATGGTGACGCCTCCAAGTTTGCCGAGCACGTCTTCCGCACCTTTGACACCAACAGCGATGGCACCATAGACTTTCGGGAGTTCATCATTGCGCTGAGCGTGACCTCACGCGGCCGCCTGGAGCAGAAGCTCATGTGGGCCTTCAGCATGTATGACCTGGACGGC |
| >XM_003891639.4 |
| TCGTCGACCCTTTTCACCCCAGACCTGTAAGCCGGGGGCTGAGCCTCAGGACAGGTGGTGCAGATGGGGGTGCAGCCCTCCCGCTTCCCGGCGACTCCGGAAAGGTCAGCGCGGGCAGGCGGGGCGCGCTCCTGCGGCCGGGCCTCGCTGGCCACCCGGTCCCCACCTGAAACCCCGCCTGCCACTCCGCTCCAGAGGAGCCAATAGCCGTGCAACCTGCCCGGGATGGGGCGGGGCTTATGCAAAACGTGTCGCCTTCGGGAGGCACATAGTGATACAAGATCTGGGAGGCGGCTCCGGCGCGGACCTCGGAGAGCACAGCTGTCGGCCCGGGAGCCAGTCTCGGTCCCCGCGGCCCGCCGAGGCTCGGAGCCATCCAGCGACCCGGCGAGCGGCCTCAGTCCCCGCCATGGGGAAGACCAACAGCAAGCTGGCCCCCGAGGTGCTGGAGGACCTGGTTCAGAACACTGAGTTCAGCGAGCAGGAGCTGAAGCAGTGGTACAAGGGCTTTCTGAAGGACTGCCCCAGCGGCATCCTCAACCTGGAGGAGTTCCAGCAGCTCTACATCAAGTTCTTCCCCTATGGCGACGCCTCCAAGTTCGCGCAGCACGCTTTCCGCACCTTCGACAAGAACGGCGACGGCACCATCGACTTCCGGGAGTTCATCTGCGCCCTGTCGGTCACCTCCCGCGGCAGCTTCGAGCAGAAGCTCAACTGGGCCTTTGAGATGTACGACCTGGACGGCGACGGGCGCATCACGCGCCTGGAGATGCTGGAGATCATCGAGGCGATCTACAAGATGGTGGGCACCGTGATCATGATGCGCATGAACCAGGACGGGCTCACGCCCCAGCAGCGTGTGGACAAGATCTTCAAGAAGATGGACCAGGATAAGGACGACCAGATTACACTGGAGGAGTTCAAGGAGGCAGCCAAGAGTGACCCATCCATTGTGTTGCTGCTGCAGTGTGACATGCAGAAGTAGAGGCTGGTGAGGGGCAGGGTCCCTGGCCAGAAGGAGCATGGCCACCTCCCAACCTGATGACCTTTCTGGCTGGCATCCCAGGAGGAGGGACACTCCAGCCCTCCTCTCTGGCCCACCCAGTCCTCTGCCCaagcccctcctcccctccatcAAGATCCCTGAGGGACCACCTTACCCTGCAAAAGAGACAGGTCCTCCGGTATCCTGTCTTCTAGCCCCACCTCACACTTGGCACAGAACCAGCGTCCATTGGGCATAGGGGAGTTGGCTTTTGCCCCAGGAGTTGAGGTTAAGGAGTTGGGGGCTTGGGGTTCTGGTTCGAAATTCTCTTGATCCTGGGATTATGCTTTATAGAATGTGGTCCCACAGGCCTGTCACAGGGCCAAATTGGGTCTGTCCACTCCTGAGGCTCCAGATCCCATAAAGGTGGTCTCTTCCCCATTCCTTCTACTCTACCTGGCCCTTCCAGCCCCAGCCTTTGGAGCGTCCATTCAGTCCTTTCTTCAGCTAGTGATTATTGAGCACCTGTTCGGTGCTAAGGATATGGTCGTTTACAAGACACATCTTGTGCCCTCTGGAAGCTCATAGGGTTGTGAGGCAAACTTCCAGCTGTCAGGGTCTCAGCTGAGCAGAGGGTGCTGGAAAGCTGGTTAGTCTGGGAGGAGCTATTTCATCTTCCAGCTCAGCTCCACACAAAGCTGCAGAAGGACGAAATGAAAAGCATTTGGAAGTTGAGGAGCCACGTGAgtgaaagttttaagaaaaatgaaatttatgtaatacttatttttttagtaCCCTTTAAAGGAGCTacagtcattttattatttcaggaGGTTAAAATATACTCTATATTACTTGGTTtcttataaaatgattaaatgaatagagaacatattaatttttaaggggaaaaaaaactgagaaaaaagggagaaaagaccaTGAAATTTACCAGATAACACTTTTTCAGACTAAGTCCTGAGCTGCCACGCTCAGCAGTTTTTGCTGCTTCAGCTCTTCCTTTTTATTACCTTTTTCAATTCGACAAGCAACTTTCTATTACATACTTACTCAGGTTGGGTGCTGACTTCAGAGACAGGAAAAAACAAGGTTTGCAAAGAGTGAGACAAGTGTATATCCCGAATCTTGGTAGTTCGTTTCTGAATTTGGTTTAGTTTCAGAACTGGACTTGTTCCTTCACTGCCACAGAATCAGAAGGAGCTCGAAGAAAAGGCTCACCTGGCCACTGTTTAGGCACCCAGACAGAATTTATGGACCAAATGCCTAAAAATGTGCCAGGCATGCTCCGTTCGAAAGGCTTTTTCTAACCCCATATCTTAGATCTGCCAGGTAGTTCATCATCTTCCAAGTACGCTGGCTCTGCTTTCCAATGCCTGCTTTCCAATTTTGGATCCATGAGCTATACAGCTGCATGCTTCGACTGCCAGAAAAATTAATCTTGCTTCTTCATCAGGTCTTTCACTTGACTTTCTCCTGTACTTGTGATCAGAAATTAGCTTTGACGTGCAGTGACAGTTGATTTCCTCTTGAACTGCTGGTGAAAACAGTCTAGTACACAGGTGCTGTCAGCCCAGGGTAGGAGTAGGAAATGATTGCTGAGCCCGGGGTGGGGGAATTGCATCTGCAGGAAAGAGATGCAGCATGCTTCTCACTCCTGAGTGCTCATCTGTCCTGCTTCTCTGCAGGTGAAAACTCTGGGGGATGCTGATCAATAGACCTTGGTCCCAAGCTTTACTGGGCCCTTGGAGGTAGCAAGGCCACTGGGTTGCCACCCGTTTTCTATCCTCTTGCTCATGACCAGTCATACGGTGAGGCTGGGGAATTAACATCCTCAGGCAGGAACTAGCAGTTGTTTATCCAGCAATGCCTCAAGGATGTTGCTTTGCTCCTAGGAGCTGGCTATTGGGTGTGTCTTGTGCGGTCAGTCAGCATCACAGACACGCAGATGCTCACCAACCTGGCTCAGCTGTGACCTAAATCTTCTGGTGGAAAGCTTTTCACTGAGGTTCCTTCCCTGCAAACGTTGAATCTAGCCTAATTCACAACTACACAGAATTTCATGGCTTTCAAAGGCTTGCCATGTGCCCCATCTCATTCTATACTCATAGCCCATGGAGGTggggattttcatttcttttctctagacTTGGAAGCTGAGATTCGGAGAGGAAGCGTCCCTTGTGCAAGATCACATAGTCAGGAGGTGACACAGTGCTAAGACTTGAACCCAAGGCTCTAAGAGGATTTCTTCTTTTCAGAGTCTCTTCTCTGTCCATTTCTGTGACTGAGCTGTGCAGAAGTTGACAGCAGGGAAAGCTACATTGATTTTCATCCTTTATAGGCTTCCTGCTAAGAAGTTTCTGAGATTGtggtcttccaaaaaaaaaaaaaaaaggagcttgtTTGAAGTCCCCACATTTTCAAGCATCCTGTGTTCTTCCTCTGGCAGCTGTGCTAACAGCTCAGTGCTATCCTGGGAGGCCTCTGAGTCAGAACCCTCGAAGCATCCTGCATTGTCTTTACCCACCATCATCTTCCCTAagagaattgtttttgttttttccaagcTGGTCAGCAAATCCTACCCATGAAGGCATATTTGATTACTCCAGGCTTctggacacacatacacatgggTGATTTTTGCTGGTCAGGCCCAGTATTCTCAGACAGCCCAGCAGTGTGAACACACAATGCCAGGCCAGGAACTGGGACCACCATCTCGCTGATGGGAGGAACCACAGGTGGGCCAGGTCTTGCTCCCACATACTCCTGGGTGTCCCAGGGACTGTGTGCTCAGGAGCACTGTGGTAGAGCACTGGCCCTGCCTTGAGAAGAGACACAGGTCTCCCGTCCCTGCACCAACTGAGAGAGACTTGCCACAAAGCACAAGGCTAGCAGAGATTTATGCATGACTTGCACAGACACAAAAGTATACAGACAATCAAAACATTAATATATCCAAACTCTCCTTTGAAATTCCAATCTTCTTGCAACAACTCTGTGAATTGCAAGGTCCTAGAATCTGCCTTCTCACATACTCTACCCTTGTTCATCCTTTTGGGCTAATTGATGAGCATCttatttcttatctctaaaaattaTCAGCAAAGGCTACTTCAGATGGCCACTTTAGTCCTTTCAGCTGTAGTCAGGATTATTTAACTTACCTTTACAtcaaaagttaagaaaaagcTAGTTCATAAGTAAAGGCACTAAATCCTTTCCTGACAATGACAGAGTCTCTAGAGGTAGAAATTTGCCTTGctgcagagagagaaggaatggcGTGGgatgggggaaagaaaagaaagagaagagaagaagctgGGGTCTCTAGGCAGGGTAGTAAGCTgacactgtaaatattttttacataaaaatgtattgaagcaacaaatatttcctgaagaTCCACCCTGGGTGAGGCTTTGAGCTGACTTTAGAGATCACTGTGGGGTCAAGAATTTCTTACATGTTTTATTCGTCattcttgaaaaaagaaataattcaaaccTTGCAATTAAAAAGTCTCAGAAAAATAtggaattttctttctgaaattttcgGGGTGTTCTTTTTACCTTTGCCAGAGTGTGGGGGCAGGACTGGGCCTGCCAGGGTGTATAGCCCTTCCTGCTTGGTGGAGGCCAGTCAGGCCCAGTGCCTTCTAAGCAGCAGTCGAGAGGAGGCTTGGGGAACGGGGGGTCTGGGTGGCAGGGGAAGGGGCCCAGTTCCAGTGTAGCCCCCTATCCCCTCCAGATGTGCTGCTTCTGGCTGTGCCCTCAGTGACTGCCCTCACTGCTCAACCCTGTGCTGTGTGGTGTGTTTCTTTTCCCACTGACAGTGAATAAAAGGTGCGACTGTG |
| PMID - Link | Title |
|---|
