Retrocopy Name | PJA2P1 |
|
Species | Macaca fascicularis | |
Coordinates | chrX:66166609-66166883 UCSC | |
Strand | - | |
Parental Sequence | XM_005557490.2 | |
Parental seq. overlap | 239 bp | |
Parental seq. overlap (%) | 4.9% | |
Genomic Region |
Intergenic |
|
Retrocopy Summary | PJA2P1, located on chrX:66166609-66166883, is a retrocopy of the parental gene PJA2. Retrocopies of protein-coding genes, also known as processed pseudogenes, are intriguing genomic elements with implications in genome evolution and diseases. While some retrocopies are non-functional, there are examples of retrocopies (retrogenes) acquiring regulatory roles or exhibiting neofunctionalization unrelated to their parental genes. |
Gene Name | PJA2 |
Full Name | N/A |
Also known as | PJA2 |
Coordinate | chr6:108077832-108152241 |
Strand | - |
Gene summary | N/A |
>PJA2P1 |
TTCATGCTGGATGGGAACAACAACCTTGAAGATGACTCCAGTGTGAGCGAAGACCTAGAAGTGGATTGGAGCCTCTTTGATGGATTTGCAGATGGGTTAGGAGTGGCTGAAGCCATTTCCTATGTGGATCCTCAGTTCCTCACCTACATGGCACTTGAAGAACGCCTGGCCCAGGCAATGGAAACTGCCCTTGCACACTTGGAGTCTCTTGCAGTGGATGTGGAGGTGGCCAATCCACCAGCAAGCAAGGAGAGCATTGACGCTCTTCCCGAGAT |
>XM_005557490.2 |
CCTCTGCTTccgccgccgccaccgccgccgccgccgccacagccgccagccgcTGCGCGTTCggcgggggaggagttggaggcggagaagaaggcggtggtggcgggtggaggTTCGAGCGCTGTTCTCGCTCCGGAGCCGCTGCACATTTCGgaatctcctgtggcttatccatagtgtgaataaaaactaaatcacatctataattctactgaactagtcatacagacactgccatatatgtcacagtacactgaaaaggagccagcagCAATGGACCAAGAATCTGGTAAGGCTGCCTGGCCCAAACCAGCAGGAGGATATCAGACAATTACAGGCAGGAGATATGGAAGAAGACATGCTTATGTCAGTTTTAAACCATGTATGACCAGGCATGAAAGAAGCTTAGGTCGGGCTGGTGATGACTATGAAGTGTTGGAACTAGATGATGTTCCAAAGGAAAATTCCTCAGGTTCCAGTCCTTTGGATCAAGTTGATTCTTCTTTGCCCAGCGAACCTATATTTGAAAAAAGTGAAACAGAAATTCCCACTTGTGGTTCAGCATTGAATCAAACCACTGAGAGCAGTCAGTCCTTTGCTGCAGTACATCATAGTGAGGAAGGCAGGGATACCTTAGGAAGCAGTACAAATCTTCATAATCACTCTGAGGGAGAGTATACTCCAGGAGCTTGTAATGCTTCAAGTGTCCAAAATGGAATTGCTTTGGTTCATACAGACTCTTATGATCCAGATGGCAAACATGGAGAAGATAATGACCGTCTTCAACTTTCTGCAGAAGTCGTGGAAGGTAGCAGATATCAGGAGTCATTAGGCAATACAATATTTGAGTTGGAAAACAGAGAGGCAGAGGCACACTCTGATCTTTCACCACCAGTTCCCTCATTTAACTGTGAAGTAAGAGATGCGTTTGAAGAGTTAGATTCTGTACCGTTAGCGAAAAGTTCTGCTGGTGATACTGAGTTTGTCCATCAGAATGGCCAGGAAATTCAGAGGTCTTCTCAAGATGAAATGGTTAGAAAGAAACAACAAAACAATGCTAGCCAGGAAAGACAGACAGAAAATTCAACTGAAGATGCAGCCTACGGTCCAGGGCATATTTGTAGTGAACAAAATACCAATGATAGGGAAAAGAACCATGGAAGTTCTCCTGAACAGGTAGTGAGGCCAAAAGTTAGAAAACTGATAAGTTCAAGCCAGGTAGACCAAGAAACAGGTTTTAATAGGCATGAGGCGAAACAAAGAAGTGTTCAAAGATGGAGGGAGGCTTTGGAAGTTGAGGAAAGTGGCTCAGATGACCTGTTAATAAAATGTGAAGAATATGATGGAGAGCATGACTGTATGTTCTTGGATCCACCATACTCGAGAGTTATTACACAAAGGGAAACAGAAAATAACCAAATAACACCAGAAAGTGGAGCCACAGCAGGAAGGCAAGAAGTGGATAACACCTTTTGGAATGGCTGTGGAGATTATTACCAACTCTATGACAAAGATGAAGACAGTTCTGAATGCAGTGATGGGGAATGGTCTGCTTCTTTGCCTCATCGATTTTCTGGTACAGAAAAAGATCAATCCTCAAGTGATGAAAGCTGGGAGACTCTGCCAGGAAAAGATGAGAATGAACCTGAGCTACAGAGTGATAGCAGTGGCCCTGAAGAAGAAAACCAAGAATTATCTCTTCAGGAAGGGGAACAGACATCCTTGGAAGAGGGAGAAATTCCTTGGTTACAGTACAATGAAGTCAATGAAAGCAGCAGTGATGAGGGAAATGAACCTGCCAATGAATTTGCACAGCCAGCTTTCATGTTGGATGGTAACAATAACCTGGAGGATGACTCCAGTGTGAGTGAAGACTTAGATGTGGATTGGAGCCTATTTGATGGCTTTGCAGATGGACTAGGAGTTGCCGAAGCTATTTCATATGTGGATCCTCAGTTCCTTACCTACATGGCATTAGAAGAACGCTTAGCCCAGGCTATGGAGACTGCTCTGGCACATTTAGAGTCTCTTGCAGTGGATGTTGAGGTGGCCAATCCACCAGCCAGTAAGGAAAGCATCGATGGTCTTCCAGAGACCCTTGTTCTTGAAGATCACACTGCTATTGGTCAGGAACAATGCTGTCCAATCTGTTGCAGTGAGTATATTAAAGATGATATAGCAACAGAGTTGCCCTGTCACCATTTCTTTCACAAACCTTGTGTCTCAATTTGGCTACAAAAGTCGGGAACATGCCCTGTGTGCCGCCGTCATTTCCCACCTGCAGTTATTGAAGCATCTGCAGCTCCTTCCTCTGAGCCTGATCCTGATGCCCCACCTTCAAATGACAGTACTGCAGAAGCGCCCTAAACCTTAACAGTTGAAATGAGATCAGTGTATCGAAGTAAATCTGCAAATTCCTTCTAAATCTCATGTGCAAATAATtatatataaatatatttaaaaaagctatatatagtatatGCCATAGTTTAGAAAGAATATTAACCTTTCTAAACTAAATTTAGGTTTGCAGAAAGTATTAAACATTTTCAAGCTGAATGTTGAGACAGTGCATCCATTTTCTTTAGTTGAATATGTTTGTATTAATTGTAAAGCCAAGCTTATCAGTTGACTTCCTCCAGAAGAAATAATCATCTGTGGCATACGTTACTGGCTTTGTCTATAATACTGCCACTAAGTGATTATAATTAAGCGCTCCTGTTTGCATCAAATGTTAAGACTGTGTTCACAACAGTAGTAAAATTTGGTTTCATTGGAAATGAAACAAATTGTAAAGTATGCTTTTTCACTAGTCCCTTTGGTTTTGCTACGCCATAACCTCTTGGTTCATATGCTGAGAAATTTTTCAGAAAGTCCATTTTTGTTTAAAATTAGGACTTTTCAGAATGCCAAATGAAGGCTAAAATTCTGGCCAGAACATTACAAAAGTTTTAAATCTTAGAAGTAACTCCCCCTGAAATAAAGTTAGGTAGTAAAATCCTTAATGAAACCAGTGGATGTGCTTAACATAAGGTTAGTAAAGCATACAAAGAATCTAGTGTGCTCAGGGCTTGGTACAATGAGCTGAATTAGATGGCCTTATGAAACCCTCTCTAACCTCACCCAACCTGTTTCTCCTTGGTAAAAATTATACTTGAAGGCCCAGAACACTCATGGCACATTTCTTTAATATTGGATATAGTTAGTTTAAGGTAATTTTGCTTCTACAGTATTTTGGAAGGTCTGAAAACTTGCACAGGGTCATCTTTGTAATTATATAACCCCAAACTAAGATGCACAGTGTCTCCTTTAGGTAATCACACACAGTAGAAGAGTATGTGCAAACATGGACATAATAGTTCACTTACAAATGTGATTTGATGTTAACACTAGAGAATGATGACTGTTAGAATATCACATTTGAGCAAGTAAAACAGTAAAGCACATAGTGAGTGTACGTCCATCTAATTGGTCCATTGATAATTTAGTTTGGGCACATGAAAGGAATATTTATATGGCTTCCCAAATGCAGAGTTACATCTTATTTGTGTAATTCCTCTGAGTATTTATATCCCGTCTCTTTTTTTCATTTTTAAAAATAAATGAATTTTCACTGTTGGCACATTTGAGGCTTAAATATAAGGAACATAACACTTGCATTCTAATTTTTGCATATATTGTAAATGTGTCTGGTATTTACAGCAAAATACTGTGTATCCTTTTATGGGTAAAACAAAAGTGAACATTGCATGCATGTAATGTGATGAATTTGTAATTTAGGAGTTCTTTGGGGCTTCTGTGACTTTGGAAATGCTTACATTCAGGCCTTAATGTTGCATTAGCTAGCATGTTTTCCCTCTGATGTATATAGTCATTGTTGTATAAACTAATCTTTGCTTGTTTTCTACTCTGTGATCTTTCCATACCATATTTCATTAATGATCAGTTAGTGTCAAGGAGTCAAATCAGATTAAAATTAATTTCATATGTATATTGTGGAAATTTGTGGCTAGTGTGATTTTTGTTTGTTTGTTTCCTTTTAAGTACTGTTGATCAGTTGTGACACTTACTGGTTAAACTTACGTTGCTAAAGATTTCTCTATAATAAGCCACACATTATATTTAGACTATATTAAGGAACCTTGGTTTTCTTCTAGATAGCAGCTGTCCCAAAGAAAATATTTCTTCTTTGCCTGTTAAGATTTATCTATTATCTGCCAGTTGTTACGAGGTTTTGGTTCCAAACTCAACCAGCAATGTTGAGAGCAGAACTTAAGATAGCTGTTGTACTTTTTGCTTTCCATCTGTTACTGTCCTTCATTCTTGGCTCCCTACTATCTATAAACAGCTGCTGTGAAGGAGAAAAGTTGAGTAAGAGTTGGCTTAAATTTTAAAAAGGAAAAAGAAAATTGAGGTTTTAGGATTTTCATGGTAACAAGCTCTGGTATAGCTAAGGCTGGCAAGTTCAGATACTAAAATATTATTTGGTCATATCTTGGATCCTTTTGAAAAAGTTAAGACTATATGAAGGTAAATTAGAAATAAGTATGAATATTAATAAAATAGCAtttatcttatttctctattttatgttgtgacttaacctaattttatttttttaacattttcttatttcttGTAATATGAATGCTGATATTTAAAGGTAGATCTATGTGGTTTTCTTTTGTGTTTCTTAATTGTTTATCTCTAACTCTTAAGATTATTTGTGATCTGGATTTATGTATTTGTTAGATACATATGAATTGTTAAAATGGAATGCAAGTTTTTCAAAAGCCCAGGTCTAAATGTAATGGTTGGTTTATTGTTCTACAACCCCAGCCCATCATTTTCTGTGTAAATCATAAACAATAAACAGAATATACTCGGTGGTCATTTCTAATA |
PMID - Link | Title |
---|