Retrocopy Name | PJA2P1 |
|
Species | Nomascus leucogenys | |
Coordinates | chrX:61033622-61033896 UCSC | |
Strand | - | |
Parental Sequence | XM_003259815.4 | |
Parental seq. overlap | 239 bp | |
Parental seq. overlap (%) | 4.9% | |
Genomic Region |
Intergenic |
|
Retrocopy Summary | PJA2P1, located on chrX:61033622-61033896, is a retrocopy of the parental gene PJA2. Retrocopies of protein-coding genes, also known as processed pseudogenes, are intriguing genomic elements with implications in genome evolution and diseases. While some retrocopies are non-functional, there are examples of retrocopies (retrogenes) acquiring regulatory roles or exhibiting neofunctionalization unrelated to their parental genes. |
Gene Name | PJA2 |
Full Name | N/A |
Also known as | PJA2 |
Coordinate | chr2:117360775-117432100 |
Strand | - |
Gene summary | N/A |
>PJA2P1 |
TTCATGCTGGATGGAAACAACAACCTTGAAGATGACTCCAGTGTGAGCGAAGACCTAGAAGTGGATTGGAGCCTCTTTGATGGATTTGCAGATGGATTAGGAGTGGCTGAAGCCATTTCCTACGTGGATCCTCAGTTCCTCACCTACATGGCACTTGAAGAACGCCTGGCCCAGGCAATGGAAACTGCCCTTGCGCACTTGGAATCTCTCGCAGTGGATGTAGAGGTGGCCAATCCACCAGCAAGCAAGGAGAGCATTGACGCTCTTCCTGAGAT |
>XM_003259815.4 |
GCttccgccgccgccaccgccgccgcggCCGCCACAGCCGCCAGCCGCTGCGCGTTCGGCGGGGGAGGAGTTGGAGGCGGAGAAGAAGGCGGTGGTGGCGGGTGGAGGTTCGAGCGCTGTTCTCGCTCCGGAGCCGCTGCACATTTcggAATCTTCTGTGGCTTATCCATAGTGTGAATAAAAACTAAATCACATCTATAATTCTACTGAACTGGTCACACTGACGCTGCCATATATGTCACAGTACATTGAAAAGGAGCCAGCAGcAATGGACCAAGAATCTGGTAAGGCTGTCTGGCCCAAACCAGCAGGAGGGTATCAGACAATTACAGGCAGGAGATATGGAAGAAGACATGCTTATGTCAGTTTTAAACCGTGTATGACCAGGCATGAAAGAAGCTTAGGTCGGGCTGGTGATGACTATGAAGTGTTGGAACTAGATGATGTTCCAAAGGAAAATTCCTCAGGTTCCAGTCCTTTGGATCAAGTTGATTGTTCTTTACCCAATGAacctatatttgaaaaaagtgaaatagaaaTTCCCACTTGTGATTCAGCATTGAATCAAACCACTGAGAGCAGTCAATCCTTTGTTGCAGTACATCATAGTGAGGAAGGCAGGGATACCTTAGGAAGCAGTACAAATCTTCATAATCACTCCGAGGGAGAGTATACTCCAGGAGCTTGTAATGCTTCAAGTGTCCAAAATGGAATTGCATTGGTTCATACAGACTCTTATGATCCAGATGGGAAACATGGAGAAGATAATGACCGTCTTCAACTTTCTGCAGAAGATGTGGAAGGTAGTAGATACCAGGAATCATTAGGCAATACAATATTTGAGTTGGAAAACAGAGAGGCAGAGGCATACACTGGTCTTTCACCACCAGTTCCCTCATTTAACTGTGAAGTAAGACATGAGTTTGAAGAGTTAGGTTCTGTACCATTAGAGAAAAGTTCTGCTGGTGATACTGAGTTTGTCCATCAGAATAGCCAGGAAATTCAGAGGTCTTCTCAAGATGAAATGGTTAGTACAAAACAACAGAATAATACTAGCCAGGAAAGACAGACAGAACATTCACCTGAAGATGCAGCCTGCGGTCCAGGGCATGTTTGTAGTgaacaaaataccaatgatagGGAAAAGAACCATGGAAGTTCTCCTGAACAGGTAGTGAGGCCAAAAGTTAGAAAACTGATAAGTTCAAGCCAGGTGGACCAAGAAACAGGTTTTAATAGGCATGAGGCGAAACAAAGAAGTGTTCAAAGATGGAGGGAGGCTTTGGAAGTTGAGGAAAGTGGCTCAGATGACCTCTTAATAAAATGTGAAGAATATGATGGAGAGCATGACTGTATGTTCTTGGATCCACCATACTCAAGAGTTATTACAcaaagggaaacagaaaataaccaaataacaCCAGAAAGTGGAGCCACAGCAGGAAGGCAAGAAGTGGATAACACCTTTTGGAATGGCTGTGGAGATTATTACCAACTCTATGACAAAGATGAAGATAGTTCTGAATGCAGTGATGGGGAATGGTCTGCTTCTTTGCCTCATCGATTTTCTGGTACAGAAAAAGATCAATCCTCAAGTGATGAAAGCTGGGAGACTCTGCCAGGAAAAGATGAGAATGAACCTGAGCTACAGAGTGATAGCAGTGGCCCtgaagaagaaaaccaagaatTATCTCTTCAGGAAGGGGAACAGACATCCTTGGAAGAGGGAGAAATTCCTTGGTTACAGTACAATGAAGTCAATGAAAGCAGCAGTGATGAGGGAAATGAACCTGCCAATGAATTTGCACAGCCAGCTTTCATGTTGGATGGTAACAATAACCTGGAGGATGACTCCAGTGTGAGTGAAGACTTAGATGTGGATTGGAGcctATTTGATGGCTTTGCAGATGGACTAGGAGTTGCTGAAGCTATTTCATATGTGGATCCTCAGTTCCTTACCTACATGGCACTAGAAGAACGCTTAGCCCAGGCTATGGAGacTGCTCTGGCACATTTAGAGTCTCTTGCAGTGGATGTTGAGGTGGCCAATCCACCAGCCAGTAAGGAAAGCATTGATGGTCTTCCAGAGACCCTTGTTCTTGAAGATCACACTGCTATTGGTCAGGAACAATGCTGTCCAATCTGTTGCAGTGAGTATATTAAGGATGATATAGCAACAGAGTTGCCCTGTCACCATTTCTTTCACAAACCTTGTGTCTCAATTTGGCTACAAAAGtcgGGAACATGCCCTGTGTGCCGCCGTCATTTCCCACCTGCGGTTATTGAAGCATCTGCAGCTCCTTCCTCTGAGCCTGATCCTGATGCCCCACCTTCAAATGACAGTATTGCAGAAGCGCCCTAAACCTTGACAGTTGAAATGAGATCAGTGTATCGAAGTAAATCTGCAAATTCCTTCTAAATCTCATgtgcaaataattatatataaatatatttaaaaatgctatatatagtatatgccATAGTTTAGAAAGAATATTAACCTTTCTAAACTAAATTTAGGTTTGCAGAAAGTATTAAACATTTTCAAGCTGAATGTTGAGACAGTGCATCCATTTTCTTTAGTTGAATATGTTTGTATTAATTGTAAAGCCAAGCTTATCAGTTGACTCTCTCCAGAATAAATAATCATCTGTGTGCCGTACGTTATTGGCTTTGTCTGTAATACTGCCACTAAGTGATTATAATTAAGCTGTCCTGTTTGCATCAAATGTAAAGACTGTGTTCCCAACAGTAGTAAAATCTGGTTTCAGTGGAAATGAAACAAGTTCTATAGTATGCTTTTTCACTAGTCCCTTTGGTTTTACTGTATCATAACCTCTTGGTTCATATGCTGAGAAATTTTTCAGAAAgtccatttttgtttaaaattaggACTTTTCAGAAGGCCAAATGAAGGCTAAAATTTTGGCCAGAACattacaaaagttttaaatcGTAGACGTAACTCCCCCTGAAATAAAGTTAGGTAGTAAAATCCTTAATGAAACCAGTGGATATGCTTAACGTAAGGTTAATAAAGCATACAAAGATTCTAGTGTGCTCAGGGCTTGGTACAATGAGCTGAATTAGATGGCCTTATGAAACTCTTTCTAACCTCTTACCCAACCTATATCTCCTTGGTTAAAATTATACTTGAAGGCCCAGAACACTCATGGCACATTTGTTTAATATTGGATATAGTTAGTTTAAGGTAATTTTGCTTTACAGTATTTTGGAAGGTCTGAAAACTTGCACAGGGTCATCTTTGTAATTATATAACCCCAAACTAAGATGCACAGTGTCTCCTTCAGGTGATCACACACAGTAGACAAGTATGTGCAGACATGGACATAATAGTTCACTTACAAATGTGATTTGATGTTAACACTAGAGAATGATGACTGTTAGAACATTTGAGCAAGTAAAATAGTAAAGCACATAGTGAGTGTACGTCCATCTAATTGGTACATTGATAATTTAGTTTGGGCACATAAAAGGAATATTTATATGGCTTCCCAAATGCAGAGTTACATCTTATTTGTGTAATTTCTCTGAGTATTTATATCCCGTCTccttttttcattcttaaatgAATTTTCACTGTTGGCACATATGAGGCTTAAATATAAGGAACATAACACTTGCAttctaatttttgcatatattgtAAATGTGTCTGGTATTTACAGCAAAATACTGTGTATCCTTTTATGGGTAAAACAAAAGTGAACATTGCATGCATGTAATGTGATGAATTTGTAATTTAGGGGTTCTTTGGGGCTTCTGTGACTTTGGAAATGCTTACATTCGGGCCTTAATGTTGCATTAGCTAGCATGTTTTCCCTCTGATGTATATAGTCACCGTTGTATAAACTAATCTTTGCTTGTTTTCTATTCTGTGATCTTTCCATATCATATTTCATTAATGATCAGTTAGTGTCAAGGAGTCAAATCAGATTAAAATTAAGTTCATGTGTATATGGTGGAAATTTGTGgctagtgtgatttttgtttgtttccttttaagtACTGTTGATCAGTTGTGACACTTACTGGTTAAACTTACGTTGCTAAAGATTTCTCTATAATAAGCCACACATTATATTTAGACTATATTAAGGgaccttggttttcttctagatAGCAGCTGtcccaaagaaaatatttcttctttgtctGTTAAGATTTAGCTATTATCTGCCAGTTGTTAAGAGGTTTTGGTTTCAAACTCAACCAGCAATGTTGAGAGCTGAACTTAAGATAGCTGTTGTACTTTTTGCTTTCCATCTGTTACTGTCCTTCATTCTTGGCTCCCTACTATCTATAAACAGCTGCTGTGAAGGAGAAAAGTTGAATAAGAGTtggcttaaattttaaaaaggaaaaagaaaattgaggtttTAGTATTTTCATGGTAACAAGCTCTGGTGTAAGCTAAGGCTGGCAAGTTCagatactaaaatattatttggtcATATCTTGGATCCTTTTGAAAAAGTTAAGACTATATGAAGGTAAATTAGAAATAAGtatgaatattaataaaatagcatttatcttatttctgtattttatgttgtgacttaattttattttttttaacattttctttttataatatgaaTGCTGATATTTAAAGGTAGATCTATGTGgtattcttttgtgtttcttaCTCTTTTGTGTTTCTTCATTGTTTATCTCTAACTCTTAAGATTATTTGTGATCTGGATTTATGTATTTGTTAGATACATATGAATTGTTAAAATGGAATGCAAGTTTTTCAAAAGCCCAGGTCTAAATGTAATGGTTGGTTTATTGTTCTACAACCCCAGCCCATCGTTTTCTGTGTAAATCATAAACAATAAACAGAATATACTCAGTGgtcatttctaata |
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