| Retrocopy Name | PJA2P1 |
|
| Species | Canis familiaris | |
| Coordinates | chrX:54575823-54576080 UCSC | |
| Strand | - | |
| Parental Sequence | XM_038660657.1 | |
| Parental seq. overlap | 218 bp | |
| Parental seq. overlap (%) | 3.9% | |
| Genomic Region |
Intergenic |
|
| Retrocopy Summary | PJA2P1, located on chrX:54575823-54576080, is a retrocopy of the parental gene PJA2. Retrocopies of protein-coding genes, also known as processed pseudogenes, are intriguing genomic elements with implications in genome evolution and diseases. While some retrocopies are non-functional, there are examples of retrocopies (retrogenes) acquiring regulatory roles or exhibiting neofunctionalization unrelated to their parental genes. |
| Gene Name | PJA2 |
| Full Name | praja ring finger ubiquitin ligase 2 |
| Also known as | - |
| Coordinate | chr3:2621748-2689506 |
| Strand | + |
| Gene summary | N/A |
| >PJA2P1 |
| TTCATGCTCGATGGAAACAACAATCTTGAAGATGACTCCAGCGTGAGTGAAGACCTAGAAGTGGATTGGAGCCTCTTTGATGGGTTCGCAGATGGCTTGGGGGTGGCCGAAGCCATTTCCTACGTGGATCCTCAGTTTCTCACCTACATGGCACTTGAAGAACGCCTGGCCCAGGCAATGGAAACTGCCCTGGCGCACCTAGAGTCTCTCGCAGTGGACGTGGAGGTGGCCAACCCACCGGCGAGCAAGGAGAGCATC |
| >XM_038660657.1 |
| ctgcttccgccgccgccgccgccgccgccgccgccgccgctgccgccgctgcgCGTTCCGCGGGGGAGGAGTCGGAGGCGGAGAAGAAGGCGGTGGTGGCGCTGAGGCTCGGGCGCTGCCGTCGCTGCGGGGCCGCTGCACTGTAGGGAATTGTCTGCAGCTTATTGTGTGAGTAAAAACTAAATCACATCCATAATTGCACTGAACTGGGCCCACGAAAACTGCCATATATGTCACAGTATACTGAAAAAGAGCCGGCAGCAATGGATCAAGAATCCAGCAAGGCTGCCTGGCCCAAACCAGCAGGAGGGTATCAGACAATCACAGGCAGGAGATACGGAAGAAGACATGCCTATGTCAGTTTTAAACCGTGTATGACCAGGCACGAAAGAAGTTTAGGTCGAGCTGGTGATGACTACGAAGTGTTGGAACTAGATGATGTTCCAAAGGAAAATTCCACAGGTTCCAGTCCATTGGATCAAGTTCATTCTTCTTTACCCAATGACcctttatttgaaaaaagtgAAACTGAAGTTCCCATTTGTGATACAACATTGAATGAAACCATTGAGAGCAGTCCATCCTTCACTGCAGTGCATCATagtgaggagggcagggagacTTTAGGAAGCAGTACCGATCCTCATAATCACTCTGAGGGAGAATATACTCCAGAAGTTTGCAGTGCTTCAAGTGTACAAAACGGAATTTCACTGGTTCAGACGGACTCTTACGATCCAAACGGCCCACATGGAGAGGCCAATGACCGTCTTCAGCTTTCTGCAGAGGTTGTGGAAGGTGGTGGATATCAGGAAACATTGGGCAATACAATATTTGAGTTGGCAAATGGAGAGGTAGAGGCATACACTGCTCTTTCACCACCAGTTCCCGCGTTCAACTGTGAAATAAGAGATGAATTTGAAGAGTTAGATTCAGCACCGTTAGTCAAAAGTTCTGCTGCTGATCCTGAGTTTGTCAGTCAGAACAATCAGGAATTTCAGAGGTCCTCTTCTGAAGATGAAGGTGTTagagagaaacaacaaaatagTACTAGccaggagagtcagagagaaagtGTAGCTGAAGATGCAGCATGTGCCCCTGGGCATGTCTGCCGTGAACAAAATACTAGTGAGAAGAACAAGAACCAGGGAAGTTTTCCTGAGCAGGTAGTGAGGCCCAAAGTTAGAAAACTGATAAGCTCAAGCCAGGTGGACCAAGAAACAGGTTTTAATAGACATGAGGCTAAACAAAGAAGTGTTCAGAGATGGAGGGAGGCTTTGGAAGTTGAGGAAAATGGCTCAGATGACCTCTTAATAAAATGTGATGACTACGATGGAGAACATGACTGCATGTTCTTGGATCCACCTTATTCAAGAGTGACTCGtagggaaacagaacataaccAAGTCACAGCAGAAAGTGGGGCCACCGCGGGAAGGCAAGAAGTCGTGGATAACACCTTCTGGAATGGCTGTGGAGATTATTACCAACTGTACGACAAAGATGAGGATAGTTCAGAATGCAGTGATGGAGAATGGTCTGCTTCTTTGCCTCATCGGTTTTCTGGTACGGAAAAAGATCAGTCATCAAGCGATGAAAGCTGGGAGACTTTGccaggaaaagatgaaaatgaaccTGAACTACAGAGTGATAGCAGTGGtcctgaagaagaaaaccaagaattGTCTCTACAGGAAGGggAACAGACATctttggaggagggagagattCCTTGGTTACAGTACAATGAAGTCAATGAAAGCAGCAGCGATGAGGGAAATGAGCCTGCCAATGAGTTTGCACAGCCAGAAGCTTTCATGCTGGATGGGAACAATAACCTTGAGGACGACTCCAGCGTGAGTGAAGACTTAGATGTGGACTGGAGcctATTTGATGGTTTTGCAGATGGATTAGGAGTTGCTGAAGCGATTTCTTATGTGGATCCTCAGTTCCTCACCTACATGGCACTAGAAGAACGCTTAGCCCAAGCTATGGAGACTGCGCTGGCACATTTAGAGTCTCTTGCAGTGGATGTTGAGGTGGCCAATCCACCAGCCAGTAAGGAAAGCATTGATGGTCTTCCAGAGACCCTTGTTCTTGAAGACCACACTGCAATTGGTCAGGAGCAGTGCTGTCCAATCTGTTGCAGTGAGTATATTAAGGATGATATAGCAACAGAGCTTCCCTGTCATCATTTCTTTCATAAACCTTGTGTCTCAATTTGGCTACAGAAGtCGGGAACGTGCCCCGTGTGCCGCCGCCATTTCCCACCTGCCGTCATAGAGGCATCAGCAGCTGCGTCCTCCGAGACTGAGCAAGAGGCCCCCCCTTCCAGTGACAGCTCGGCGGATGCCCCCTAAACCTTAACCCTCGGATGAGATCGCCCTGTCAAAGTCAATCTGCAAATTCCTTCTCAATCTGATGtgcaaataattatatataaataaatttaaaatgctatatataGTCTATGCCATAGTTTAGAAAGAAGAATATTAACCTTTCTAAACTAAATTTAGGTTTGCAGAAAGTACTAAACATTTTCAAGCTGAATGTTGAAGCAGTGCATCCATTTTCTTTAGTTGACTATGTtgatatcagttgtaatgtcAAGCTTACCAATTAATAACTCTTTCCAGAAGAAATAATCCTATATGTGGCATCTATTATTGATTTTGTCTGAAGTACTGCCACTAAGTGATTATAATTAAGCTCTCCTATTTGCATCAAATGTGAAGACTGTGATCACAACAGTAGTAAAATTTGGTTTcattggaaataaaaagaattctaaaacatGCTTTTTGATTGGTTGCTTTGCTTTTGCTATATCAGAACCTCTTGGTTCATAatactgagggttttttttgttgttgttgttgttgtttttaggaaGGTGTCTGCTCTTCCATGTTTGTTTAAagttaaaatgccaaaaaaaaaaaaaaagccaaaattttgGCTAAAacatctcaaaattttaaaatcttaaatgttgTAATCCCCTTGGAATAGTTAgatagtaaaacattttttttttctttttctaaatggtGGATGTGCTTAGAGTAATGTTAGTAAAGCATGAGTGTTTTACTATGGTTGGTGCTTGAGGTAAAGTTAGTAAAGCTTATGAGCAATCTCGTGTGCTCAGTGTTTGGTATGAAATGAATTAGATGGCCTTATGAAATCCTTCTCCCTTTCTACTTGGTTACAGTCATACTTGAAAACATTCATTACACGtttgttaaatacttttttaatttataaatttataaatatgcttatttataaatttataaacattaGATACAGTTTGTTTAAAGTAATTTTGGAAAGTCTGAAAACATCCATCAGGTGTTTAAACATTCATTCTGTTGTATCCCAAGGAGAAATCCGATCCTTAAAAAACTAGAAGGTTAATTGTACCAACTTGTATAAAGCATAAAATTGATGGGGTATAGGACAGATTTTGGCCACATCTTTTCACAATATATCTAAATCTTACTGtgttataatttattcttttaaagtattcCTGAACAAGGATTACTCATAGTGCATTTTCAGcgtttctttaatttattttgataaaattattcacctgaaaataaataataaaaatgggttTGTTTTGAATTAAGCCAAATTAAGCCCTGGGTGAAAGGAGGAGATGACATGATCACCTAGTGACTGTGAGCAGAACTGAACATGTAACATGGttcctttctgattttcctttctctaaaagaGAGAAGATCCTGACCCTAGATTTGCACTCTAAAAGAGTTCTGTTCAGATTCTTCTATAAAAGTGAGGAAATGAGCTTTCCTTAGTTGTCTTAATGGGAAATTTGGCCCCCAGGGTCATCCATTATTATATAACCTCCAAATGAGATTGCACAGCTTTCCATTTAGGTGGTCACACCCAGTAGGCACATACGTGCAAACGTGCACGTAATATTTAACCTACAGATGGGATTTGCTATCAGCACCAGAGAATGATAGGTGTCAGAATGCCGCATTTGAGCAAGTAAAATTGTAAAGCACGTAGTGAGTGTACATCCATCTGAGTAGTACATTGATAATTTGGTTTGGACACGTAAGGAATATTTATGGCTTCCCAAAtgcaaaattccattttatttgtgtAATTTCTCTGAGTATTTATATTCCATCTCTTTCCTCCGTTCTTAAATGAATTTTCACTGTTGGCACATTTGAGGCTTAAATATAAGGAACATAACACTTGCATTCTAATTTTTGCAAAATTGTAAATGTGTGTCTGGTATTTACAGCAAAATACTGTGTATCCTTTTATGggtaaaacaaaactgaacattGCATGCCTGTAATGTGGTGACTTTGTAATTTAGGGGTTCTTTGGGGCTTCTGTGACTTTGGAAATGCTTACATTCAGGCCTTAATGTTGCATTAGCTAGCATGTTCCCCCCTGATGTATATAGTCACTGTTGTATAAACTAATCTTTGCCTGTTTTCTACTCCGTGATATTTCCATACCATATTTCACTGATGAGCAGTTAGCGTCAAGGAGTCAAATCAGATTAAAATTAATTCTCATGTGTATATCGTGGAACTTTGTGGCTagtgtggtttttaatttttctcttttctttttctcgtttctttttctgttgttttccgTTAAGTAATATTGATCAGTTGTGATGCTTACTGGTTAAACTGACATTGCTACAGATTGCTCTATAGTAAGCCACAAATTCTATTTAGGCAGTATTAAGGGACGTCAGTTTTCTTCTCCTAGTAGCAGCTgtcccaaagaaaatatttcttctttgcctgTTAAGGTTTAGCTGTTATCTGCCAGTTGTTAAGAGGTTTTGGTTCCAAACTCAACCAGTAGTGTTGAGAGTTGAACTTAAGATAGCGGTTGTACTTTTTGCTTCCCATCTGTTTCTATCCTTCATTCTTGGCTCCCTACTATCTATAAACAGCTGCTGTGAAGGAGAAAAGTTGAATAGGagttggcttaaaaaaaattttttttaagaaaattgagaCTTTAGGATTTTCATTATAACAAGTTGATACAAGCAGAGGCTGAAAAGTTCAGATTCCAAAATATCGTTTGATCCTCTGAAATATTGTTTGGGTCCTTTTGGAAAAGTTAAGAATATATGAAGGTAAGTTAGGAGTAAGTATAAATATGgattaaaaatactgtttctcttatttctctgttaagtgacttaattttatttttttgaacattttcttcttccttgtaaTATGAATGCTGATATTTAAAGGTAGATCCATGTGGttttctgttgtgtttcttaATTGTTTATCTCTGAGCTAACTCTTAAGATTATTTGTGATTTGGATTTATATATAAGCtgttaaatatatatgaactGTTAAAATGGAATGCAAGTTTTCAAAAGCCCAGGTCTAAATGTAATGATTGGTTTATTGTTCAATCACCCCAGTCCATCATTTTCCGTGTAAATCATAAACAATAAACAGGATGTACTCAGTGgtcatttctaata 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| PMID - Link | Title |
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