| Retrocopy Name | PJA2P1 |
|
| Species | Ailuropoda melanoleuca | |
| Coordinates | chrX:50822947-50823204 UCSC | |
| Strand | - | |
| Parental Sequence | XM_034656606.1 | |
| Parental seq. overlap | 208 bp | |
| Parental seq. overlap (%) | 3.8% | |
| Genomic Region |
Intergenic |
|
| Retrocopy Summary | PJA2P1, located on chrX:50822947-50823204, is a retrocopy of the parental gene PJA2. Retrocopies of protein-coding genes, also known as processed pseudogenes, are intriguing genomic elements with implications in genome evolution and diseases. While some retrocopies are non-functional, there are examples of retrocopies (retrogenes) acquiring regulatory roles or exhibiting neofunctionalization unrelated to their parental genes. |
| Gene Name | PJA2 |
| Full Name | N/A |
| Also known as | - |
| Coordinate | chr3:79507003-79585126 |
| Strand | - |
| Gene summary | N/A |
| >PJA2P1 |
| TTCATGCTGGATGGAAACAACAACCTTGAAGACGACTCCAGTGTGAGCGAAGACCTGGAAGTGGATTGGAGCCTCTTCGACGGGTTCGCTGACGGCTTGGGGGTGGCCGAAGCCATCTCCTATGTGGATCCTCAGTTCCTCACATACATGGCACTTGAAGAACGCCTGGCCCAAGCGATGGAAACCGCCCTCGCGCACCTGGAGTCTCTGGCTGTGGATGTGGAGGTGGCCAACCCGCCGGCGAGCAAGGAGAGCATC |
| >XM_034656606.1 |
| cccaggcgcccctatttctgGAATCTTCTGCAGCTTATTCATTGTGTGAGTAAAAACTAAATCACATCCATAATTGCACTGAACTGGGCACACAAAAACTGCCATATATGTCACAGTATACTGAAAAAGAGCCAGCAGCAATGGATCAAGAATCCAGCAAGGCTGCCTGGCCCAAACCAGCAGGAGGATATCAGACAATCACAGGCAGGAGATATGGAAGAAGACATGCATATGTCAGTTTTAAACCATGTATGACCAGGCATGAAAGAAGTTTGGGTCGGGCTGGTGATGACTATGAAGTATTGGAACTAGATGATGTGCCAAAGGAAAATTCCTCAGGTTCCAGTCCATCGGATCAAGTTCATTCTTCTTTATCCAATGACACTTTATTTGACAAAAGTGAAACAGAAATTCCCATTTGTGATTCAACATTGAATCAAGCCATTGAGAGCAGTCCATCCTTTGCTGCAGTACATCATAGCGAGGAGGGCAGGGAGACTCTAGGAGGCAGTACAGACCTTCATAATCACTCTGAGGGAGAATATACTACAGAAGCTTGCAGTGCTTCAAGCGTACAAAATGGAATTTCATTGGTTCAGACTGACTCTTACAATCCAGATGGCACACACGGAGAGACCAATGACCGTCTTCAGCTTTCTGCGGAAGTTGTGGCAGGTGGTGGGTATGAGGAGGCATTGGGCGGTACAGCATTTGAGCTGGCGGACGGAGAGGTAGAGGCACGTACTGGTCTTCCACCACCAGTTCCCGCTTTTAGCTGTGAAATAAGAGATGAATTTGAAGAATTAGATTCAGCGCCTTTAGTCAAAAGTTCTACTGGTGATACTGAGTTTGTCAGTCAGAACAATCAGGAATTTCAGAGGTCCTCTTCTGAAGGTGAAGTTGTTAGAAAGAAGCAACAAAATGATACTAGCCAGGAGAATCAGAGAGAAAATGCAGCTGAAGATGCAGTGTGTGCTCCCGGGCATATCTGCAGTGAACAAAATACTAGTGGTAAGGACAAGAACCAGGGAAATTTCCCTGAACAGGTAGTGAGGCCCAAAGTTAGAAAACTGATAAGTTCAAGCCAGGTGGACCAAGAAACAGGTTTTAACAGGCATGAGGCTAAACAGAGAAGTGttcagagatggagggaggctTTGGAAGTTGAGGAAAATGGCTCGGATGACCTCTTAATAAAATGTGACGACTACGATGGGGAACATGACTGCATGTTCTTGGATCCACCTTACTCAAGAGTTACGCATAGGGAAACAGAACATAACCAAATAACAGCGGAAAGTGGAGCCACAGCAGGAAGGCAAGAAGTGGTAGAGAACACCTTTTGGAATGGCTGTGGCGATTATTACCAACTGTATGACAAGGATGAAGATAGTTCAGAATGCAGTGATGGAGAATGGTCTGCCTCTTTGCCTCATCGGTTTTCTGGTACAGAGAAAGATCAGTCGTCAAGTGATGAAAGCTGGGAGACTTTGCCAGGGAAAGATGAGAATGAACCTGAACTACAGAGTGATAGCAGTGGtcctgaagaagaaaaccaagaattGTCTCTACAAGAAGGGGAACAGACATCCTTGGAAGAGGGCGAGATTCCTTGGTTACAGTACAATGAAGTTAATGAAAGCAGCAGTGATGAGGGAAATGAGCCTGCCAATGAATTTGCACAGCCAGAAGCTTTCATGCTGGATGGTAACAATAATCTTGAGGATGACTCCAGTGTAAGTGAAGACTTAGATGTGGACTGGAGcctgttTGACGGCTTTGCAGATGGACTAGGAGTTGCTGAAGCGATTTCTTACGTGGATCCTCAGTTCCTCACCTACATGGCACTGGAAGAACGCTTAGCCCAGGCTATGGAGACTGCACTGGCACATTTAGAGTCTCTTGCAGTGGATGTTGAGGTGGCCAATCCACCAGCCAGTAAGGAGAGCATTGATGGTCTTCCAGAGACCCTTGTTCTTGAAGACCACACTGcgATTGGTCAGGAGCAGTGCTGTCCAATCTGTTGCAGTGAGTATATTAAGGATGATATAGCAACAGAGCTTCCCTGTCACCATTTCTTTCACAAACCTTGTGTCTCAATTTGGCTACAGAAgTCGGGAACGTGCCCTGTGTGCCGCCGCCACTTCCCACCTGCTGTCATCGAGGCATCGGCAGCTCCATCCTCGGAGCCTGACCAGGAGGCCCCCCCTTCTGGCGACAGCTCTGCGGAAGCCCCCTAAACCTTAACGCTTGAATGAGATCACTCTGTCAAAATCAGTCTGCAAATTCCTTCTCAATCTGATGtgcaaataattatatataaataaatttaaaatgctatatatAGTCTATGCCATAGTTTAGAAAGAAGAATATTAACCTTTCTAAACTAAATTTAGGTTCGCAGAAAGTACTAAACATTTTCAAGCTGAATGTTGAAGCACTGCATCCATTTTCTTTAGTTGAATATGTTGGTATTAATTGTAAAGCCAAGCTTACCAATTAACTCTCTCCAGAAGAAATAATCATATATGTGGCACATATTATTGGTTTTGTCTGAAGTACTGCCACTGAGTGATTATAATTAAGCTCTCCTATTTGCATCAAATGTGAAGACTGATCACAACAGTAGTAAAATTTGGTTtcattggaaataaaaagaattctaaaacatGCTTTTTTTCATTGGTCACTTTGCTTTTGCTACATCAGAACCTCTTGGTTCATAAtactgagtgttttttttttgttttttttaggaaGGTGTCTACTCTTCCATCTTTCCTTAAAATTAGGACTTAAAATTAGACTGCCAAACAAAGGCCAGAATTTTGGCTTAAacatcacaaaattttaaaatcttaaatgtaatCCCCTTGGAATGGTTagatagtaaaataatttttttttctttttctaaatggtGGATGTGCTTAAAGTAAGGTTAGCAAAAAGCATGAATGTTTTACTATGGTTGGTGCTTGAGGTAAGGTTAGTAAAGCTTCTGAACAATCTAGTATGCTCAGTGTTTAGTATGATGAGACGAATTAGATGGCCTTATGAAATCCTTTCTACTGGTTACAGTATACTTGAGAACATTCATGgcacatttgttaaataaatactgtttttttaatttataaatttataaataagtatatttataaatttataaaagatacagtttgtttaaagtaattttggttctgaaatattttagaaagtttgaAAACGTGCATCAAAGTGTTTAAACATTCATTCTGTTGTATCCCAAGAGGAAATCTGATCCTTAAAAAACCAGAAGTTTAATGGTACCAACTTTTATAAAGTATAACATTGATGGGGTATAGGACAGATTTAGCCGCATCTTTTTACAACATATCTAAAGCTTACTGTGttataatttattcctttaaagTATTTCTGAACAAGGATTAGTCATAGTACATTTTCAGCATTTGTTTCATTACactaatttattttgataaaattattcacctggaaataaataataaaaatgggttGTTTTGAATTAAACCAAATTAAGCCCTGGGTGAAAAGGGAgtaaattatatgatcatctagTGACTATGAGCAGAACTGAACATGTAACACGGttcctttcttgttttacctTTCTCTAAAGGAGAAAAGATGACCCTGACCCCCGATTTGCCCTCTAAAAGAGTTCTGTTCAGATTCTTCTATAATAGTGAGGAAATGAGCTTTCCTTAGTTGTTTTTAGGGGAACTTTGGCCCTCAGGGTCATCCATAATTATATAACCCCAAAATAAGATTGCACAGCTTTTCATTTAGGTGATCACACCCAGTAGGCAAATATGTACAAATGGACATAATATTTAACTTACAGATGTGATTTGCTGTCAGCACCAGAGAATGATAGGTGTTAGAATAATACCACATTTGAGCAAGTAAAATTGTAAAGCACGTAGTGAGTGTACATCCATCTGAGTAGTACATTGATAATTTAGTTTGGACACGTAAAAGGAGTATTTATATGGCTTCCCAAAtgcaaaattacattttatttgtgtaatttCTCTGAGTATTTATATTCcatctcttttctccattcttaAATGAATTTTCACTGTTGGCACATTTGAGGCTTAAATATAAGGAACATAACACTTGCATtctaatttttgcatatattgtAAATGTGTGTCTGGTATTTACAGCAAAATACTGTGTATCCTTTTATGggtaaaacaaaactgaacattGCATGCATGTAATGTGGTGACTTTGTAATTTAGGGGTTCTTTGGGGCTTCTGTGACTTTGGAAATGCTTACATTCAGGCCTTAATGTTGCATTAGCTAGCATGTTTTCCTTCTGATGTATATAGTCACTGTTGTATAAACTAATCTTTGCTTGTTTTCTACTCTGTGATCTTTCCATACCATATTTCATTGATGATCAGTTAGTGTCAAGGAGTCAAATCAGATTAAAATTAATTCTCATGTGTATATTGTGGAACTTTGTGgctagtgtgattttttttttcttttccttttcttgtttcttttttgttgttgtttgtttcctttaataCTGATCGGTTATGATGCTTACTGGTTAAACTGACATTGCTACAGATTGCTCTGTAGTAAGCCACAAATTATATTTAGGCAGTATTAAGGGACGTCAGTTTTCTTCTCCTAGTAGCAGCTGtcccaaagaaaatatttcttctttgcctGTTAAGATTTAGCTATTATCTGCCAGTTGTTAAGAGGTTTGGCTTCCAAACTCAACCAGTAGTGTTGAGAGCTGAACTTAAGATAGCGGTTGTACTTTTTGCTCTccatctgtttctctccttcattcttgGCTCCCTACTATCTATAAACAGCTGCTATGAAggagaaaagttgaaaaagagttggcttaaaaaaaatttttttaagaaaattcagaTTTTAGGATTTTCATTGTAACAAGTTGATACAAGCAGAGGCGGAAAAGTTCAGATGCCAAAATATTGTTTGATCCTCTGAAATACTGTTTAGATTCTTTTGGAAAAGTTAAGAATATATGAAGGTAAATTAGGAATAAGtataaatattgataaaaatattgtttctcttATTCTCTATGTTAAGTGACTtgacctaattttattttttttaaacattttcttcttccttgtaaTATGAATGCTGATATTTAAAGGTAGATCCATGTGGTTTTCTATTGTGTTTCTTAATTGTTTATCTCTGAGCTAACTAACTCTTAAGATTATTTGTGATTTGGATTTATATATAAGctgttaaatatatatgaactGTTAAAATGGAATGCAAGTTTTCAAAAGCCCAGGTCTAAATGTAATGATTGGTTTATTGTTCAACAACCCCAGTCCATCATTTTCCGTGTAAATCATAAACAATAAACAGGATGTACTCAGTG 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