Retrocopy Name | PJA2P1 |
|
Species | Phyllostomus discolor | |
Coordinates | scaffold_m19_p_9:10631787-10632044 UCSC | |
Strand | - | |
Parental Sequence | PJA2_x2 | |
Parental seq. overlap | 214 bp | |
Parental seq. overlap (%) | 11% | |
Genomic Region |
Intergenic |
|
Retrocopy Summary | PJA2P1, located on scaffold_m19_p_9:10631787-10632044, is a retrocopy of the parental gene PJA2. Retrocopies of protein-coding genes, also known as processed pseudogenes, are intriguing genomic elements with implications in genome evolution and diseases. While some retrocopies are non-functional, there are examples of retrocopies (retrogenes) acquiring regulatory roles or exhibiting neofunctionalization unrelated to their parental genes. |
Gene Name | PJA2 |
Full Name | N/A |
Also known as | NULL |
Coordinate | scaffold_m19_p_2:141772166-141823903 |
Strand | + |
Gene summary | N/A |
>PJA2P1 |
TTCATGCTGGACGGCAACAACAACCTTGAAGATGACTCTAGCGTAAGTGAAGACCTAGAAGTGGATTGGAGCCTCTTTGATGGCTTTGCAGATGGCTTGGGGGTGGCCGAAGCCATCTCCTATGTGGATCCTCAGTTCCTCACATACATGGCACTTGAAGAACGCCTGGCCCAGGCAATGGAAACGGCCCTTGCACACTTGGAATCTCTTGCAGTGGACGTGGAGGTGGCCAATCCACCAGCAAGCAAGGAGAGCATC |
>PJA2_x2 |
atgtcacagtatagtgagaaagagtcagcagCAATGGATCAAGAATCCAACAAGGCTGCCTGGCCCAAACCAGCAGGAGGATATCAAACAATCACAGGCAGGAGATATGGAAGAAGACATGCATATGTCAGTTTTAAACCTTGTATGACCAGGCACGAAAGAAGCTTAGGTCGAGCTGGTGATGACTATGAAGTGTTGGAACTAGATGATGTTCCAAAGGAAAATTCCTCAGGTTCCAGTCCATTGGATCAAGTTCAGTCTTCTTTACCCAATGATCCTTTATTTGAAAACAATGAAACAGGAATTCCCATTTGTGATACAGCACTGAATCAAACCATTGAGAGCAGTCCATCCTTTGCTGCAGTACATCATAATGGGGAAGGCAGGGAGACCTTAGGAAGCAGTACGAATCTTCATAATCACTCAGAGGGAGAATATACTCCAGGAGTTTGTAACGCCTCAAGTGTCCAAAATGGAATTGCATTGGTTCATACTGACTCTTACAATCCAGATGGCAAACATGGAGAGGATAATGACCGTCTTCAGCTTTCTGCAGAAGTTGTGGAAGGTCGTAGATATCAGGAAACATTGGGCAATACAATATTTGAGTTGGAAAATGGAGAGGTAGAGGCATATACTGGTCTTTCACCACCAGTTCCTTCTTTTAACTGTGAAATACGAAATGAGTTTGAAGAATTTGATTCAGCGCCTTTAGTGAAAAGTTCTACTGGTGATACTGAGTTTGTCAATCAAAACAAACACGAATTTCGGAGGTCCTCTTCTGAAGAGGATGTTACTAGAAAGGAGCAAAATAATCCTAGCCAGGAGACACAGAGAGAAAACTCAACTGAAGATTCAGCCTGTGCTCTGGGGCATATTTGCCGTGAACAAAATACCAGGGGTAGGGACAACAACCAGGGAAGTTCTCCTGAACAGGTAGTGAGACCCAAAGTTAGAAAACTGATCAGTTCAAGCCAGGTGGACCAAGAAACAGGTTTTAATAGGCATGAGGCTAAACAAAGAAGTGTTCAGAGGTGGAGGGAGGCTTTGGAAGTTGAGGAAAATGGCTCAGATGACCTCTTAATAAAATGTGATGATTACGATGGAGAACATGACTGTATGTTCTTGGATCCACCTTACTCAAGAGTTACACAGAGGGAAACAGAAAATAACCAGATAACATCAGAAAGTGGAACCACAGCAGGAAGGCAAGAAGTTGTGGATAACACCTTTTGGAATGGTTGTGGAGATTATTACCAACTATATGACAAAGACGAAGATAGGGAACAGACATCTTTGGAAGAAGGAGAAATTCCTTGGTTGCAGTACAATGAAGTCAATGAAAGCAGCAGTGATGAAGGAAATGAGCCGGCCAATGAATTTGCACAGCCAGAAGCGTTCATGTTGGATGGTAACAATAACCTTGAGGATGACTCCAGTGTGAGTGAAGATTTGGATGTGGACTGGAGTCTGTTTGATGGCTTTGCGGATGGACTAGGAGTTGCTGAAGCTATTTCTTATGTGGATCCTCAGTTCCTCACCTACATGGCACTAGAAGAACGCTTAGCCCAGGCTATGGAGACTGCCTTGGCCCATTTAGAGTCTCTTGCAGTCGATGTCGAGGTGGCCAACCCACCAGCAAGTAAGGAGAGCATTGATGGTCTTCCAGAGACACTTGTTCTTGAAGACCATACCGCCATTGGTCAGGAGCAGTGCTGCCCAATCTGTTGCAGTGAGTACATTAAGGATGACATAGCGACAGAGTTGCCCTGCCACCATTTCTTCCACAAACCCTGTGTCTCAATTTGGCTACAGAAGTCAGGAACATGCCCTGTATGCCGCCGTCATTTCCCACCGGCAGTGATCGAAGCATCTGCAGCTGCTTCCTCTGAGCCTGATCGCGATGCCCCGCCTTCAAATGACAGTACTGCGGAAGCTCCTTAA |
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