Retrocopy Name | Ipo5_1P1 |
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Species | Cricetulus griseus | |
Coordinates | chr3:31608478-31609208 UCSC | |
Strand | + | |
Parental Sequence | XM_027393910.2 | |
Parental seq. overlap | 570 bp | |
Parental seq. overlap (%) | 14.8% | |
Genomic Region |
Intergenic |
|
Retrocopy Summary | Ipo5_1P1, located on chr3:31608478-31609208, is a retrocopy of the parental gene Ipo5. Retrocopies of protein-coding genes, also known as processed pseudogenes, are intriguing genomic elements with implications in genome evolution and diseases. While some retrocopies are non-functional, there are examples of retrocopies (retrogenes) acquiring regulatory roles or exhibiting neofunctionalization unrelated to their parental genes. |
Gene Name | Ipo5 |
Full Name | N/A |
Also known as | Importin-5 |
Coordinate | NW_023276807:270794098-270824281 |
Strand | + |
Gene summary | N/A |
>Ipo5_1P1 |
TCAGGATGAAGATGAATGTGATGTTTATATTCTGACCAAAGTATCAGATATCTTGCACTCATTATTTAGCACTTACAAGGAGAAGATTTTGCCATGGTTTGAACAGCTACTTCCTTTAATTGTGAATCTAATTTGTTCAAGTAGGCCATGGCCAGATCGACAGTGGGGATTGTGCATATTTGATGATATCATAGAGCACTGCAGCCCAACCTCATTCAAATATGTTGAGTATTTTCGGTGGCCAATGCTACTCAATATGCGAGATAACAACCCCGAAGTCAGGCAAGCTGCTGCTTATGGACTGGGTGTTATGGCACAGTTTGGTGGAGACGATTATCGTTCTTTATGTTCAGAAGCTGTTCCACTGTTGGTAAAGGTTATTAAGTGTGCAAATTCCAAAACgaaaaaaaatgtcattgctACAGAGAACTGTATCTCAGCAATAGGAAAGATTATGAAGTTCAAGCCCAATTGTGTGAATGTAGATGAGGTTCTCCCACACTGGCTGTCATGGCTCCCGCTGCATGAAGATAAAGAAGAAGCTATTCAGACTTTGAATTTTCTCTGTGACCTAATTGAAAGTAACCACCCAGTTGTGATCGGTCCCAATAATTCCAATCTTCCCAAAATCATCAGTATAATTGCAGAAGGAAAAATTAACGAGACTATTAGCCACGAAGACCCCTGTGCCAAACGCCTAGCTAACGTTGTTCGACAGATACAGACTTCTG |
>XM_027393910.2 |
CCGGTGGTGATTTCCTTTGTCAGTAATTGGCTGTTGTAACATTGTATCCCAACCTTTCACTATCTCATGCAGGAAACCTATGAGAATATCCCAGGCCAGTCCAAGATCACGTTCCTCCTACAAGCCATCAGAAATACAACAGCTGCTGAGGAGGCTAGACAAATGGCCGCTGTTCTCCTAAGACGTCTTTTGTCCTCTGCATTCGATGAAGTCTATCCAGCTCTTCCATCAGATGTCCAGACTGCCATCAAGAGTGAACTGCTAATGATTATTCAGATGGAAACACAATCTAGCATGAGGAAAAAAATTTGTGATATTGCTGCAGAATTGGCCAGGAATTTAATAGATGAGGACGGCAACAACCAGTGGCCTGAGGGTCTGAAGTTCCTCTTTGACTCAGTCAGCTCACAGAACATGGGGCTCCGGGAAGCTGCCCTCCACATATTCTGGAACTTTCCTGGAATTTTTGGGAACCAACAACAGCACTATCTGGATGTCATCAAACGGATGTTAGTTCAGTGTATGCAAGATCAAGAGCATCCTTCGATCCGGACACTGTCTGCCAGAGCCACAGCCGCCTTTATACTCGCCAACGAGCATAACGTTGCTCTGTTCAAGCACTTTGCAGACTTGCTACCTGGATTCTTACAGGCTGTCAACGATTCATGCTACCAGAATGACGATTCGGTCCTAAAATCTCTTGTTGAGATTGCAGATACTGTTCCAAAGTATTTGCGCCCTCACTTAGAAGCAACTCTACAGCTAAGTCTAAAGTTGTGTGGAGACACTACCCTCAACAATATGCAGCGTCAGCTTGCCCTCGAAGTGATTGTGACCCTGTCTGAGACTGCAGCTGCTATGCTGAGAAAGCATACCAATATTGTTGCACAGACTATTCCTCAGATGTTGGCAATGATGGTTGATCTAGAAGAAGATGAGGACTGGGCAAATGCTGACGAGCTAGAAGATGACGACTTTGACAGCAATGCAGTTGCTGGTGAGAGTGCGTTGGACCGTATGGCCTGTGGACTTGGTGGGAAGCTTGTTCTGCCAATGATCAAGGAACACATTATGCAAATGCTTCAAAACCCTGACTGGAAATACCGGCATGCAGGATTAATGGCCTTATCTGCCATTGGTGAGGGGTGCCACCAACAGATGGAAGGAATTCTAAATGAGATTGTAAATTTTGTCTTGCTTTTCCTCCAGGATCCTCACCCAAGAGTCCGCTATGCAGCCTGCAACGCTGTGGGTCAGATGGCTACAGATTTTGCACCtggttttcaaaagaaatttcatGAGAAGGTGATTGCAGCTTTGCTTCAAACCATGGAAGACCAAGGCAACCAGAGGGTGCAAGCCCATGCGGCAGCTGCACTCATTAACTTCACTGAAGACTGTCCCAAGTCACTGCTCATCCCCTATTTAGATAACCTGGTGAAGCACCTGCACTCCATTATGGTCCTCAAACTTCAGGAGCTGATTCAGAAAGGCACCAAGTTAGTTTTGGAACAAGTTGTGACCTCCATCGCATCAGTTGCAGACACTGCAGAAGAGAAGTTTGTCCCCTACTATGACTTATTTATGCCGTCCCTGAAGCACATTGTTGAGAACGCAGTCCAGAAGGAGCTGCGGCTCCTGAGGGGCAAGACCATCGAGTGTATCAGCCTCATTGGCCTGGCCGTCGGCAAGGAGAAGTTCATGCAGGATGCATCAGATGTGATGCAGCTATTGCTGAAGACCCAGACAGACTTCAATGATATGGAAGACGATGACCCTCAGATCTCTTACATGATCTCAGCATGGGCAAGAATGTGCAAAATCCTTGGGAAAGAATTCCAGCAGTACCTTCCCGTGGTTATGGGGCCACTGATGAAGACTGCTTCAATTAAGCCTGAAGTAGCCCTTCTTGACACCCAGGACATGGAGAATATGAGTGATGATGACGGTTGGGAATTTGTGAACCTTGGAGATCAGCAAAGTTTTGGTATTAAAACTGCAGGACTGGAAGAAAAGTCAACTGCTTGCCAGATGTTGgtttGCTATGCTAAGGAACTAAAGGAAGGTTTTGTGGAATACACTGAGCAGGTTGTCAAACTGATGGTGCCTCTGCTGAAATTTTATTTCCACGATGGGGTGCGAGTGGCAGCTGCCGAATCCATGCCTCTTCTGTTGGAGTGTGCGAGAGTCCGGGGTCCCGAGTACCTCACACAGATGTGGCACTTCATGTGTGACGCCCTCATCAAGGCTATCGGCACGGAGCCTGATTCAGATGTCCTCTCGGAAATCATGCACTCTTTTGCAAAGTGCATAGAAGTGATGGGAGACGGGTGTCTTAGCAGCGAGCACTTTGAGGAGCTGGGAGGAATACTGAAAGCCAAGCTGGAGGAACATTTCAAAAATCAGGAATTGCGGCAAGTTAAAAGACAAGATGAAGACTATGATGAGCAGGTTGAGGAGTCGCTACAGGATGAGgatGATAATGATGTTTATATTCTGACTAAAGTGTCAGATATTTTACACTCAATTTTCAGTAGCTACAAAGAAAAGGTGTTGCCGTGGTTTGAGCAGCTGCTTCCATTAATTGTCAACCTGATTTGTCCACACAGACCGTGGCCAGACAGACAGTGGGGATTGTGTATCTTCGATGACATCATAGAACACTGTAGTCCATCCTCATTTAAGTATGCAGAATATTTCTTAAGGCCAATGCTCCAGTATGTGTGTGACAACAGCCCAGAAGTCAGGCAAGCCGCGGCATATGGCCTTGGTGTCATGGCACAGTATGGTGGAGATAATTACCGCCCTTTCTGTACAGAAGCCCTCCCACTGCTTGTGAGAGTTATTCAGTCTGCAGACTCTAAGACCAAAGAGAATGTCAATGCTACAGAGAACTGCATCTCCGCAGTGGGGAAAATCATGAAATTCAAGCCTGACTGCGTAAACGTTGAAGAAGTCTTACCACACTGGTTGTCTTGGCTTCCACTACATGAAGATAAAGAAGAAGCTGTCCAGACCTTCAGTTATCTGTGCGACCTGATTGAAAGTAATAACCCAATTGTTCTTGGCCCAAACAATACCAATCTACCCAAAATATTCGGTATAATTGCGGAAGGAGAGATGCATGAGGCCATCAAACATGAAGACCCCTGTGCCAAACGCCTGGCCAATGTCGTTCGCCAAGTACAGACTTCTGGAGGCTTGTGGACTGAATGCATAGCACAACTCAGTCCGGAGCAGCAGGCAGCCATACAAGAGCTCCTGAACTCTGCCTGATGGACGGCCTTAATACCACCTGCCAGAAAACTAACTCCAAATAAACGTTTACCCTTTTGtttaggtttctttgttttgtttttgagcaagAGAGCAGTAGTGTTGTGTGTAGGCCATTCTTCTGGAGCCGCGAGTGCACAGGAAAAGCAGCCCTGTGTGCAAAGTGGACTGTGTGGATCTCATCTGACCCACGGAGGAGGTCCTTGTAAGCCCCATGGTAGCACTGCAGagtgttttctattgctgtgtccTACTGTGTGAAGGGAAGACTACAGAAACGTAAGGATCAGTTCATCCACATAGAAGCATGTTAAACAGACGGGGAGACAACCTAGTGTTCTTTCCATGAATTGGAGAGTCAGTGTATGTGGGGTAGAAAGAAGCCTTTGCCCAGCCAACCAGCCGAAAACAAGTGATGACAAACAAGCATGAGGCTGTCATTGAGTCACTGTTGGTTCTCCCCCCAGAGGCTTATGCAGTGACTCAGTGTGGAGGCTGCCCTTGAATGTGAAGTGTGTTTGGCATGTCTGCAGTAGTCTCATTCACTCCTCAATAAACAGCATTGAAATACCAAGAGGCTCGTGTAA |
PMID - Link | Title |
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No publications available for this retrocopy |