| Retrocopy Name | Ipo5P1 |
|
| Species | Mus musculus | |
| Coordinates | chr19:29787080-29787419 UCSC | |
| Strand | - | |
| Parental Sequence | NM_023579.4 | |
| Parental seq. overlap | 274 bp | |
| Parental seq. overlap (%) | 6% | |
| Genomic Region |
Intergenic |
|
| Retrocopy Summary | Ipo5P1, located on chr19:29787080-29787419, is a retrocopy of the parental gene Ipo5. Retrocopies of protein-coding genes, also known as processed pseudogenes, are intriguing genomic elements with implications in genome evolution and diseases. While some retrocopies are non-functional, there are examples of retrocopies (retrogenes) acquiring regulatory roles or exhibiting neofunctionalization unrelated to their parental genes. |
| Gene Name | Ipo5 |
| Full Name | importin 5 |
| Also known as | 1110011C18Rik|5730478E03Rik|IMB3|Kpnb3|Ranbp5|imp5 |
| Coordinate | chr14:121134255-121185458 |
| Strand | + |
| Gene summary | Enables nuclear import signal receptor activity. Involved in NLS-bearing protein import into nucleus; cellular response to amino acid stimulus; and positive regulation of protein import into nucleus. Located in cytoplasm and nucleus. Is expressed in germ cell of testis; gonad; ovary; spermatid; and testis. Orthologous to human IPO5 (importin 5). [provided by Alliance of Genome Resources, Apr 2022] |
| >Ipo5P1 |
| GAGAACTGTATCTCAGCAATCGGAAAGATTCTGAAGTTTAAGCCCAACTGTGTAAATGTGGATGAAGTTCTCCCACACTGGTTATCGTGGCTTCCGCTGCATGAAGATAAAGAAGAAGCTATTCAGACTTTGAATTTTCTCTGTGACCTAATTGAAAGCAACCACCCAGTTGTGATTGGTCCAAATAATTCCAATCTTCCCAAAATCATCAGTATAATCGCAGAAGGAAAAATTAATGAAACTATTAGCCATGAAGACCCCTGTGCCAAACGCCTAGCTAATGTTGTCCGTCAGATACAGACTTCTGAAGAATTGTGGTTGGAATGCACATCTCAACTCG |
| >NM_023579.4 |
| TCCCGCCGGCCCGCCAGCGCGCCTCacagctccctccttctctctctcacgCCTAGCGCAATGGCGGCGGCCGCGGCGGAGCAGCAACAGTTCTACCTGCTCCTGGGAAACCTGCTCAGCCCCGACAATGTGGTCCGGAAACAGGCGGAGGAAACCTATGAGAATATCCCAGGCCGGTCCAAGATCACATTCCTCTTACAAGCCATCAGAAACACAACCGCTGCCGAGGAGGCTAGACAAATGGCTGCTGTTCTCCTAAGACGTCTTTTGTCCTCTGCATTTGATGAAGTCTACCCAGCTCTTCCATCAGATGTCCAGACTGCCATCAAGAGTGAATTGCTAATGATCATTCAGATGGAAACACAATCCAGCATGAGGAAGAAAATCTGTGATATTGCTGCAGAATTGGCCAGGAATTTAATAGATGAGGACGGCAACAACCAGTGGCCTGAAGGTTTGAAGTTCCTCTTTGATTCAGTCAGCTCACAAAACATGGGACTCCGGGAAGCTGCCCTTCACATATTTTGGAACTTTCCTGGAATTTTTGGGAACCAACAACAGCACTATTTGGACGTCATCAAACGGATGTTAGTTCAGTGTATGCAAGATCAGGAGCATCCTTCGATCAGGACACTGTCTGCCAGAGCTACTGCTGCCTTCATACTTGCCAATGAGCATAATGTCGCTCTGTTCAAACACTTTGCAGACTTGCTGCCTGGATTCTTACAGGCTGTCAATGACTCATGCTACCAGAATGATGACTCGGTCCTAAAATCCCTTGTTGAGATTGCAGACACCGTACCAAAGTACTTGCGCCCTCACTTAGAAGCAACTCTGCAGTTGAGTCTGAAGTTGTGTGGAGACACTAACCTCAATAATATGCAGCGCCAGCTTGCCCTTGAAGTGATTGTGACACTGTCAGAGACTGCAGCTGCTATGTTAAGAAAGCATACCAGTCTCATCGCACAGACGATTCCTCAGATGTTGGCAATGATGGTTGACCTAGAAGAAGATGAGGACTGGGCAAATGCTGATGAGCTAGAAGATGATGATTTCGATAGCAATGCAGTTGCTGGTGAGAGTGCATTAGACCGAATGGCCTGTGGACTTGGTGGAAAGCTCGTTCTGCCCATGATTAAGGAACACATTATGCAAATGCTTCAAAACCCTGATTGGAAATACAGGCATGCAGGACTGATGGCCCTATCCGCCATTGGCGAAGGATGCCACCAGCAGATGGAAGGAATTCTAAATGAGATTGTAAATTTTGTCTTGCTTTTCCTCCAGGATCCTCATCCGAGAGTCCGGTATGCAGCCTGCAATGCTGTGGGTCAAATGGCTACAGATTTTGCACCTGGTTTTCAAAAGAAATTTCATGAGAAGGTGATTGCAGCTTTGCTTCAGACCATGGAAGACCAAGGCAACCAGCGGGTGCAGGCCCATGCAGCGGCTGCCCTCATTAACTTCACTGAAGATTGTCCCAAGTCGCTGCTTATTCCCTACTTGGATAACTTGGTGAAGCACCTGCACTCCATTATGGTGCTCAAGCTCCAGGAGCTGATTCAGAAAGGCACCAAGTTAGTTTTGGAACAAGTTGTGACATCCATTGCATCAGTTGCAGATACTGCAGAAGAAAAGTTTGTCCCCTACTATGACTTGTTTATGCCATCACTGAAGCACATTGTCGAGAACGCAGTCCAGAAGGAGCTGAGACTGCTGCGAGGGAAGACCATCGAGTGCATCAGCCTCATCGGGCTGGCCGTCGGGAAGGAGAAATTCATGCAGGATGCTTCAGATGTGATGCAGCTATTGTTGAAGACACAGACAGACTTCAATGATATGGAAGATGACGACCCCCAGATTTCTTACATGATCTCAGCATGGGCCAGGATGTGCAAAATCCTTGGGAAAGAATTCCAGCAGTACCTTCCCGTGGTTATGGGGCCGCTGATGAAGACTGCTTCAATTAAGCCTGAAGTGGCCCTTCTAGACACCCAGGACATGGAGAATATGAGTGATGATGACGGTTGGGAATTTGTGAACCTCGGAGATCAGCAAAGTTTTGGTATTAAAACTGCAGGACTGGAAGAAAAGTCAACGGCTTGTCAGATGTTGGTTTGCTATGCTAAGGAATTAAAGGAAGGTTTTGTGGAATACACTGAACAGGTTGTCAAACTGATGGTCCCGctgctgaaattttatttccacgATGGGGTCCGAGTGGCAGCAGCAGAGTCCATGCCTCTTCTGCTTGAGTGTGCGAGAGTCCGGGGTCCCGAGTACCTTACACAGATGTGGCACTTCATGTGCGACGCTCTCATCAAGGCCATCGGCACAGAGCCCGACTCAGATGTCCTCTCGGAGATCATGCATTCCTTTGCAAAGTGCATTGAGGTCATGGGAGACGGGTGCCTCAACAATGAGCACTTTGAGGAGCTGGGAGGCATCCTGAAGGCGAAGCTTGAAGAACATTTCAAAAATCAGGAGTTGCGGCAAGTTAAAAGACAAGATGAAGACTATGACGAGCAGGTTGAAGAGTCACTACAAGATGAGgATGATAATGATGTTTATATACTGACTAAAGTGTCGGATATTTTACACTCAATATTCAGTAGCTACAAAGAAAAGGTGTTGCCGTGGTTTGAACAGCTGCTCCCATTAATTGTCAACCTGATTTGTCCGCAAAGACCATGGCCAGACAGACAATGGGGATTGTGCATCTTCGATGATATCGTAGAACACTGTAGTCCAGCTTCATTTAAGTATGCAGAATATTTCATAAGTCCAATGCTCCAGTATGTGTGTGACAACAGCCCAGAAGTCAGGCAAGCTGCGGCATATGGCCTCGGCGTCATGGCGCAGTTTGGTGGAGATAACTACCGCCCTTTCTGTACCGATGCACTCCCGCTGCTTGTAAGAGTCATTCAGGCTCCAGAGGCTAAGACCAAAGAAAATGTCAACGCCACGGAGAACTGCATCTCAGCAGTGGGAAAGATCATGAAGTTCAAGCCCGACTGTGTGAATGTGGAGGAGGTCTTACCACACTGGCTGTCATGGCTGCCCCTACACGAAGATAAAGAAGAAGCTGTCCAGACCTTCAGTTACCTGTGCGACCTGATTGAAAGTAATCACCCAATTGTTCTTGGCCCAAACAATACCAATCTACCGAAAATATTCAGTATAATTGCAGAAGGAGAAATGCATGAGGCCATTAAACATGAAGACCCCTGTGCCAAACGCCTGGCCAATGTAGTTCGCCAAGTACAGACTTCTGGAGGATTGTGGACTGAATGCATAGCTCAACTCAGTCCGGAGCAGCAGGCAGCCATCCAGGAGCTCCTGAACTCTGCCTGAAGGGCCTTAACTACCACCTGCCAGAAGACTAACTCCAAATAAACGTTTACCCTTTTGTttaggtttctttgttttgtttttgagcaaGAGAGCAGTAGTGTTGTGTGTAGGCCGTTCTTCTGGAGCCGTGCACAGGAAAAGTAACCCTGTGTGCAGGGTGGACTGCCATGGATCTCATCAAACCCGCAGAGGAGGTCCCTGTAAGCCTGATGGTAGCACTGCAgagtatttttctattgctgtgtctGACCCacaagaagggaaagaggaaacgaTTCCTTTTTTCTCATAGACCTGCAGAAACGTAAGGAACGCAGCTTTCAGATCAGTTCATCCACATAGATGTGTGTTACACAGACTGGGGGACAACCTAGTGTTTATTCTGTAAATGGAGTGAGAGTCTGGGGGGATGGAAAGAAGCCAACCAGCTGCTGACAAGCCAGAAGCAAAGGGCTGTCACTTGATGTCACGCTGGTTCTTTGCAAGAAGGCTCATGCAGTGACTCGGTGTGGAGGCTGTCCCACTCCCTCCCGGCCCTTGAATGTGAAGTGTCGTTGGCATGTCTGGCAGTCGTCTCATTCACTCCTCAATAAACAGCATTGAAATACAAAGAGGCCTGTGTAGAACTTCAGTACTGTCTGTCGTTGATTCCTTTCATGTTTTAATAGAAGAGTGATCTGATATTTTTTTAAGGTGATAGTTCTGGCTCAGTGTTTTACCTCCACGCTCTGCAGTGCAGCCTTGGAAGTGTGTCTCCTGTCTTGGAAAGCGCAGTTATAACACAGCTACTCTGTTCACAATTGGTATTCTGAAGGTTTGCACATTCAACCGGCTTTTTTAAAGCTTAGGGTTGTTCTGTAGATCCAAACGTTTTggcttaggatttccattgcagATTGTAATTGCTTTAGAGACACACGCagcttttgaatttttttaattttacaagtaTTATGGCTAAACTTATTTACTGAAAATTTCAGTAAAATGTGTgaaattttctttatgtattaACCTCAGAGCAGTAACTGATGAGCTGTTGTTTCCTTTAAGTAATTTTCTAAGGGATCTTAATAGATTTCTGTTGAAACCTTGGTGTTAACGTTTTCATAGTTTGTACTAAATTTAACTGTGATACAAAAATGAGTTTTATGCATAAAtcagaatttaaaattaaaaaattttttctttaaatgatttgCATTActtcattaaaacaaaatttggaatgaaattgaaaa |
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