| Retrocopy Name | RANBP6 |
|
| Species | Homo sapiens | |
| Coordinates (hg38) | chr9:6012369-6015286 UCSC | |
| Coordinates (T2T) | chr9:6017507-6020424 UCSC | |
| Coordinates (hg19) | chr9:6012369-6015286 UCSC | |
| Strand | - | |
| Parental Sequence | NM_002271.6 | |
| Parental seq. overlap | 2428 bp | |
| Parental seq. overlap (%) | 40.4% | |
| Genomic Region |
Intergenic |
|
| Retrocopy Summary | RANBP6, located on chr9:6012369-6015286, is a retrocopy of the parental gene IPO5. Retrocopies of protein-coding genes, also known as processed pseudogenes, are intriguing genomic elements with implications in genome evolution and diseases. While some retrocopies are non-functional, there are examples of retrocopies (retrogenes) acquiring regulatory roles or exhibiting neofunctionalization unrelated to their parental genes. |
| Gene Name | IPO5 |
| Full Name | importin 5 |
| Also known as | IMB3|KPNB3|Pse1|RANBP5|imp5 |
| Coordinate | chr13:97953641-98024296 |
| Strand | + |
| Gene summary | Nucleocytoplasmic transport, a signal- and energy-dependent process, takes place through nuclear pore complexes embedded in the nuclear envelope. The import of proteins containing a nuclear localization signal (NLS) requires the NLS import receptor, a heterodimer of importin alpha and beta subunits also known as karyopherins. Importin alpha binds the NLS-containing cargo in the cytoplasm and importin beta docks the complex at the cytoplasmic side of the nuclear pore complex. In the presence of nucleoside triphosphates and the small GTP binding protein Ran, the complex moves into the nuclear pore complex and the importin subunits dissociate. Importin alpha enters the nucleoplasm with its passenger protein and importin beta remains at the pore. Interactions between importin beta and the FG repeats of nucleoporins are essential in translocation through the pore complex. The protein encoded by this gene is a member of the importin beta family. [provided by RefSeq, Jul 2008] |
| >RANBP6 |
| GAAACACATGCTAGCATGAGGAAAAAACTTTGTGATATTTTTGCAGTGCTGGCCAGGAATTTGATAGATGAGGATGGCACTAACCACTGGCCGGAAGGTCTGAAGTTTCTTATTGATTCAATCTACTCCAAAAATGTGGTTCTATGGGAAGTTGCACTTCACGTTTTCTGGCACTTTCCTGGGATTTTTGGGACCCAAGAGCGGCATGATTTGGATATCATCAAACGGTTGTTGGACCAGTGTATTCAAGATCAAGAACATCCAGCAATCAGGACATTATCCGCTAGAGCTGCAGCTGCATTTGTACTTGCTAATGAGAATAATATTGCTCTTTTCAAAGACTTTGCAGACTTGCTTCCTGGAATCTTACAGGCTGTGAATGACTCATGCTACCAGGATGATGATTCAGTGCTAGAATCCCTTGTTGAGATTGCAGATACCGTACCTAAGTACTTGGGTCCTTATTTAGAAGATACTCTACAGTTGAGTTTGAAGTTATGTGGAGACTCTAGGCTTAGTAATCTGCAGCGCCAGCTGGCCCTCGAAGTTATAGTGACCTTGTCTGAAACTGCCACTCCGATGTTGAAAAAACATACAAATATTATTGCACAGGCAGTTCCTCATATATTAGCAATGATGGTTGATCTACAAGATGATGAGGACTGGGTAAATGCTGATGAAATGGAAGAAGATGATTTTGACAGCAATGCAGTTGCTGCGGAGAGTGCACTAGACAGACTGGCTTGTGGGCTTGGTGGAAAAGTTGTTTTACCAATGACCAAGGAGCATATCATGCAGATGCTTCAGAGCCCTGACTGGAAGTATCGACATGCTGGATTAATGGCCTTATCTGCCATTGGAGAAGGATGCCATCAACAAATGGAATCAATTCTAGATGAAACAGTTAACTCCGTTTTGCTTTTTCTTCAGGATCCTCATCCAAGGGTGAGGGCTGCAGCCTGTACTACACTTGGACAGATGGCTACAGATTTTGCACCTAATTTCCAAAAGAAATTTCATGAAACAGTGATTGCAGCTCTGTTACGTACCATGGAAAATCAAGGTAATCAGCGTGTGCAATCACATGCAGCTTCTGCTCTTATTATTTTTATTGAAGACTGCCCTAAATCATTGCTAGTTCTATATGTGGATAGTATGGTGAAAAATCTACATTCCGTCTTGGTGATTAAACTTCAAGAGTTGATTCGGAATGGAACTAAGTTGGCTTTGGAACAACTTGTGACAACCATTGCATCAGTTGCAGATACAATAGAAGAAAAATTTGTCCCATATTATGATATATTCATGCCCTCACTAAAGCACATTGTTGAGCTTGCTGTTCAGAAGGAACTCAAGCTTCTGAGAGGAAAAACTATCGAGTGCATTAGCCATATTGGTCTTGCTGTTGGGAAGGAAAAATTTATGCAAGATGCATCAAATGTGATGCAGCTGTTGTTGAAGACACAATCAGACTTAAATAATATGGAAGATGATGACCCTCAGACCTCTTACATGGTTTCAGCATGGGCTAGAATGTGTAAAATTCTTGGAAAAGATTTTCAACAGTACCTTCCACTGGTTATCGAGCCTCTTATTAAGACTGCTTCAGCTAAACCTGATGTTGCTCTCTTAGACACACAGGATGTGGAAAATATGAGTGACGATGATGGCTGGCAATTTGTAAATCTTGGAGACCAGCAGAGTTTTGGAATTAAAACTTCAGGACTTGAAGCAAAAGCAACTGCTTGCCAAATGTTGGTTTACTATGCTAAGGAGTTAAGGGAAGGGTTTGTGGAATATACAGAACAAGTTGTGAAGCTGATGGTTCCTTTACTGAAATTTTATTTCCATGACAATGTTCGAGTGGCAGCAGCAGAGTCCATGCCTTTTCTCCTGGAATGTGCAAGAATTCGTGGCCCAGAGTATCTTGCACAGATGTGGCAATTCATATGTGACCCCTTAATCAAGGCTATTGGTACTGAACCAGATACAGATGTGCTCTCAGAAATAATGAATTCTTTTGCAAAGTCCATTGAAGTTATGGGAGATGGTTGCCTTAATGATGAACACTTGGAAGAACTGGGAGGAATACTGAAAGCAAAACTTGAAGGGCACTTTAAAAACCAAGAATTGAGACAGGTGAAAAGACAGGAAGAAAACTATGATCAACAGGTTGAGATGTCTCTGCAAGATGAGGATGAATGTGATGTTTATATTCTGACCAAAGTATCAGATATTTTGCACTCATTATTTAGTACTTATAAGGAAAAGATTTTACCATGGTTTGAACAACTACTTCCATTAATTGTAAATCTAATTTGTTCAAGTAGGCCATGGCCAGACAGACAGTGGGGATTGTGCATATTTGATGACATCATAGAGCACTGCAGTCCAACTTCATTTAAATATGTAGAATATTTTCGGTGGCCAATGCTACTAAATATGCGAGATAACAACCCTGAAGTCAGGCAAGCTGCTGCTTATGGCCTGGGTGTCATGGCACAGTTTGGTGGAGATGATTATCGTTCTTTATGTTCAGAAGCTGTTCCACTTCTGGTAAAAGTTATTAAGTGTGCAAATTCCAAAACCAAAAAAAATGTCATTGCTACAGAGAACTGTATCTCAGCAATAGGGAAGATTTTGAAGTTTAAGCCTAACTGTGTAAATGTAGATGAAGTTCTTCCACACTGGTTATCATGGCTTCCACTGCATGAAGATAAAGAGGAAGCTATTCAGACTTTGAGTTTTCTCTGTGACCTAATTGAAAGTAACCACCCAGTTGTAATTGGTCCAAATAATTCCAATCTTCCCAAAATAATCAGTATAATTGCAGAAGGAAAAATTAATGAGACTATTAACTATGAGGATCCTTGTGCCAAACGCCTAGCTAATGTCGTGCGTCAGGTACAGACTTCTGA |
| >NM_002271.6 |
| GACCTCCCACAACTGGAGCAGCCGGGAACAGCTCTGACCACAGTGGTTCCGGGGAGAAGCCTTTCCAGGACCCATGTGTAGGCACAACTGTTTTCCCTGATCAGGATACTTGCGGCACTCAACAGAGGAAAGAAATTCCTAAGGGAACACTGCTCAGAAAGTACTGCAGCATGTCTTCAAATGCCTGAGGATCAAGTTGGAAAACTAGAAGCAACAGAAAACACAATAAGCGCAATGGCGGCGGCCGCGGCGGAGCAGCAACAGTTCTACCTGCTCCTGGGAAACCTGCTCAGCCCCGACAATGTGGTCCGGAAACAGGCAGAGGAAACCTATGAGAATATCCCAGGCCAGTCAAAGATCACATTCCTCTTACAAGCCATCAGAAATACAACAGCTGCTGAAGAGGCTAGACAAATGGCCGCCGTTCTCCTAAGACGTCTCTTGTCCTCTGCATTTGATGAAGTCTATCCAGCACTTCCCTCTGATGTTCAGACTGCCATCAAGAGTGAGCTACTCATGATTATTCAGATGGAAACACAATCTAGCATGAGGAAAAAAGTTTGTGATATTGCGGCAGAACTGGCCAGGAATTTAATAGATGAGGATGGCAATAACCAGTGGCCCGAAGGTTTGAAGTTCCTTTTTGATTCAGTCAGCTCTCAAAATGTGGGACTGCGGGAAGCTGCCCTTCACATTTTCTGGAACTTTCCTGGAATTTTTGGGAACCAGCAACAACACTATTTAGATGTCATCAAACGAATGTTAGTTCAGTGTATGCAAGATCAGGAACACCCGTCGATCAGGACGTTATCTGCTAGAGCTACAGCTGCATTTATACTTGCAAATGAGCATAATGTTGCTCTGTTCAAACATTTTGCAGACTTGCTACCGGGATTCCTACAGGCGGTAAATGACTCGTGCTACCAGAATGATGATTCTGTCCTAAAATCCCTCGTTGAGATTGCAGATACTGTTCCAAAGTATTTGCGTCCTCACTTGGAAGCAACTCTACAGCTAAGTCTAAAGTTGTGTGGAGACACTAGCCTCAACAATATGCAACGCCAGCTTGCCCTTGAAGTGATCGTCACCCTCTCTGAGACTGCAGCTGCTATGTTAAGAAAACATACCAATATTGTTGCACAGACTATTCCTCAGATGTTAGCAATGATGGTTGATTTGGAAGAAGATGAGGACTGGGCAAATGCAGATGAACTAGAAGATGATGATTTTGACAGCAATGCAGTTGCAGGCGAGAGTGCTCTAGATCGAATGGCTTGCGGACTTGGTGGAAAGCTCGTTCTGCCGATGATCAAGGAACACATTATGCAAATGCTTCAAAATCCTGACTGGAAATACCGGCATGCAGGATTGATGGCCTTATCTGCCATTGGTGAAGGGTGCCACCAGCAAATGGAAGGAATTCTAAATGAGATCGTAAATTTTGTTTTACTTTTTCTCCAGGATCCTCATCCAAGAGTAAGGTATGCAGCCTGTAATGCCGTGGGACAGATGGCTACAGATTTTGCACCTGGTTTCCAAAAGAAATTTCATGAGAAGGTGATTGCAGCTCTGCTGCAGACCATGGAAGACCAAGGCAATCAACGTGTGCAGGCCCATGCAGCTGCTGCCCTCATTAACTTTACTGAAGACTGTCCCAAGTCACTACTTATTCCATACTTGGATAATTTGGTGAAACATCTGCATTCCATTATGGTACTGAAGCTTCAAGAGCTGATTCAGAAAGGCACCAAGTTAGTTTTGGAACAAGTTGTGACATCCATTGCATCAGTTGCCGATACTGCAGAAGAAAAATTTGTCCCCTACTATGATTTATTTATGCCATCACTGAAGCACATCGTTGAGAATGCGGTTCAAAAAGAACTGAGACTTCTGAGAGGAAAAACTATTGAATGCATTAGCCTCATTGGTCTGGCTGTTGGGAAGGAAAAATTCATGCAGGATGCATCAGATGTGATGCAGCTTTTGTTAAAGACCCAGACAGACTTCAATGATATGGAAGATGATGATCCTCAGATCTCTTACATGATCTCAGCATGGGCCAGAATGTGCAAAATCCTTGGAAAAGAATTTCAGCAATACCTTCCAGTGGTTATGGGGCCTTTAATGAAGACGGCTTCAATTAAGCCCGAAGTAGCCCTTTTAGATACCCAAGACATGGAGAATATGAGTGATGATGATGGTTGGGAATTTGTGAACCTTGGAGATCAGCAAAGCTTTGGTATTAAAACTGCAGGACTAGAAGAAAAATCAACTGCTTGCCAGATGTTGGTTTGCTATGCTAAGGAGTTAAAGGAAGGCTTTGTGGAGTACACCGAACAGGTTGTCAAACTGATGGTCCCTTTACTGAAATTTTATTTCCACGATGGTGTTCGAGTGGCAGCAGCGGAATCCATGCCTCTTCTCCTGGAGTGTGCAAGAGTCCGTGGTCCTGAGTATCTCACACAGATGTGGCATTTTATGTGTGATGCTCTAATTAAGGCCATTGGTACAGAACCAGATTCAGACGTCCTCTCAGAAATAATGCATTCTTTTGCAAAGTGCATTGAAGTAATGGGAGATGGATGCCTTAATAATGAACACTTTGAAGAACTGGGAGGTATATTGAAAGCAAAGCTTGAAGAACATTTTAAAAATCAAGAATTACGACAAGTTAAAAGACAAGATGAAGACTATGATGAACAGGTCGAAGAGTCACTACAAGATGAGGATGATAATGATGTTTATATTCTGACCAAAGTGTCAGATATTTTACACTCAATATTCAGTAGCTACAAAGAAAAGGTGTTACCATGGTTTGAACAGCTGCTTCCATTAATTGTCAACCTCATTTGTCCACATAGACCATGGCCAGACAGACAATGGGGATTATGCATCTTTGATGATGTCATAGAACACTGTAGTCCAGCCTCATTTAAATACGCAGAATATTTCTTAAGACCAATGCTCCAATATGTATGTGACAACAGCCCAGAAGTCAGGCAAGCAGCTGCATATGGCCTGGGAGTCATGGCACAGTACGGTGGAGATAATTATCGCCCTTTTTGTACAGAAGCACTTCCCCTGCTGGTAAGAGTTATTCAGTCTGCGGATTCTAAGACCAAAGAAAATGTCAATGCTACAGAGAACTGCATCTCAGCAGTAGGGAAAATCATGAAGTTCAAGCCTGACTGTGTAAACGTTGAAGAGGTCCTTCCACACTGGTTGTCTTGGCTTCCACTACATGAAGATAAAGAAGAAGCTGTTCAGACTTTCAATTATCTGTGTGACCTGATTGAAAGTAATCATCCAATTGTTCTTGGCCCAAACAATACCAATCTGCCCAAAATATTTAGTATAATTGCGGAAGGAGAAATGCACGAGGCAATTAAACATGAAGATCCTTGTGCCAAACGTCTGGCCAATGTCGTTCGCCAAGTACAGACTTCTGGAGGACTGTGGACTGAGTGCATAGCACAGCTCAGTCCTGAGCAGCAGGCCGCCATTCAGGAGCTCCTGAACTCTGCGTGAAGGGCCTTAATGTCACCCACCAGAAAACTAACTCCAAATAAACGCTTACCCTTTCCTTTAGGTTTCTTTGTTTTGTTTTTGAGCAAAAGAGATCGGTAGTGTTGTGTGTAGGCCATTCTTCTGGAGAGCCACAAGCAGGAAGAGCAGCGCTGTGTTGCAGAATGGAGTTTCCATGGATTTCTACCAGACCACTGAAGGAGTTCCTGGAAGCCCTGCGGTAGCTAGCACTGAAGACTATTTTTCTATTGGTATAACCCGCCCACCTGAAGGGGAAAGGGAAATCAAATTAATTTTTCTCGTTAGACATAAGGAAATTTAAGGAAAAACAGCTTTAAGAACAGTTACTCAGCGTAGATGTGTGTTCACACAAATTGCTCTGCATTCAGTGTTCATTGTGAATTGGGAGTGTGAGTCTTTCTGTAGGGTAGAAAGAAGCCTCCTACCCAGCAAACCAGTAGACCCAAAAGTTGAAAAAAACTGATGACAGACAACAAGCATGAAGATGGCATATTTGATGTCACTTTGGTTCTTTTTCCCAGAAGGCTTATACAGTGACTCAGTCGGGAAGCTTTCCAGCTTCCAGCCCTTGAATGTGAAGTGTCATTGGCATGTCTGGCAGTAGTCTCTCATTCACTCCTCAATAAACAACATTGAATACAAAAGAGGCTTGTGTAAAAACTCAGTACTGTCTGGCTTGGATTCATTTCATGTTTTTAATATAAGAATGATCTAATATTTTTTTAAAGTAATAGCTATCAGTAATAGCTGAGTGTTTTTTCCCCTAATATTTTCCTTGTGCAATTCAGACTTAAGCATCGAGTTTTTACCATCTTCCACTTTAAGCTAAGTTATGATACCTATTCCATTCACAATTGGTGTTCTTTTTAAGGTTTGCAAATTTCAGCCAATTTTGTAGCTAAGATTGTTCTGATCAGCTCAAAAAGATTTGGCTTAGTGTTTTCATTGCAAATTATAATTGCTGTAGAGCCACACACAACTTTTGAACTTTTAATTATAAGTGTTATGGCTAAAGTTATTTACTGAAAATTTCAGTAAAATGTGTGAATGTTTCTTTATGTATTAACCTCATAGCAGTAAATGACTTGCTGTTGTTTAATTTTTCTAAGGCATCTTAATAGACTTCTGTTGAAAACTTCAGTGTTAACATTTTTATAGTTTGTACTAAATTTAACCGTGATATAAAAATGAATTTTATGCATAGATCAGAATTTTAAATTAAAGGTTTTTTCTTTAAATGATTTGTATTACTTTATTAAAACTAAATCTGAAATGGAATAGAAAATAGAATGGATTACATACAGATGGTTTCCTTGTTAGCAGATGCCCTTCAAATATATTTTACGTTTGCAGCACAACACCATTGCCCGGAGGCTTCCGAATCTAGCAAAGCAGCATATTAAATGACTCCACCTGCGCAGTCCTTGTGTTCAGTGGATGAATACCTGTGGGCTCTTGTAATGTGTGGTAATATTTGGAGCTTTATAGCCTGTATTCCTTGGGAGAAAAAAATGGGAATTGGAGTAAAAAGTGTGTCAAGACAACCCCTTTCTGCTTTCTTATGTAGCATCTGCAAAGCCGATTCATGTACTGATGCCAATCAGCTAGAGCAATGTAGGCTTTTTTTAATTTAAATTATTACTACACTTTATTACTACACTTGCAGAAAAGAAACATGTTAAAATCATGGCACACCTGCAGAATTTCAGATGACAGTGTGGTCAGAAGATGTTTTTTGGgagaacctagtgtttgctgggcactatgctaagcactttGGGAGCAAGAACCTCCTACCTTCCAGTTTAAACACTAGTGGTATTGTCAGATGCCGTTAGTATCTGAGATGTACTTACAGCAGGGTTCTAAGAGCTCTGAAAGAAGCGCTCTGTTAGATGCAGACTGGCAGCATCCTCCTTGATAAAAGCAGAAAAGCAAAGAGGTAATTGGAGTTGAATCAAGTTAATAGGGAAGGTTGGTAGTAAATGCTGTTAGTGTGACATGATTCTGAAACCCAGAGCTCAGAACTAACTGTGAGATGTACCATGAACTAACAATTCTTTGAAAGGACCTGCAGAAGCATTTTTAATACCTCATTCTGTCTATGCAAGATGAAAATCCATGGAGTTTTTTCTTGGCTTTTGTACCAAATTTAGGGGTCTTGCATGTCAGCAAGTGATATATATTGTTTATAAATGCAAGCTATTTCTGGAGGGGAAAAATGTGTGTGGCTCTTACGTTTTCTGGGAATTTTGTAACAAGTTACACGCACAAGTGTTAGAAACTTTGGCATAACTCAATTTGGAGTATTTTTTAAATGCTGTATCTTTAAAGAAAAGTAAAATTGTCTTAAATCTAATTGACACTTCTGTAATGAGAGGCAACCTTATAACTCTGGAGTTGTAGTTTGACAGAACCATCAGTAAAGACATAAGCAAATAAATGGTCTTGGTGCA |
| PMID - Link | Title |
|---|
