| Retrocopy Name | IPO5P1 |
|
| Species | Oryctolagus cuniculus | |
| Coordinates | chr1:48140191-48141952 UCSC | |
| Strand | + | |
| Parental Sequence | XM_017343561.1 | |
| Parental seq. overlap | 1450 bp | |
| Parental seq. overlap (%) | 34.9% | |
| Genomic Region |
Intergenic |
|
| Retrocopy Summary | IPO5P1, located on chr1:48140191-48141952, is a retrocopy of the parental gene LOC100352665. Retrocopies of protein-coding genes, also known as processed pseudogenes, are intriguing genomic elements with implications in genome evolution and diseases. While some retrocopies are non-functional, there are examples of retrocopies (retrogenes) acquiring regulatory roles or exhibiting neofunctionalization unrelated to their parental genes. |
| Gene Name | LOC100352665 |
| Full Name | N/A |
| Also known as | IPO5 |
| Coordinate | chr8:99784272-99846821 |
| Strand | + |
| Gene summary | N/A |
| >IPO5P1 |
| ATGGTAAAAAATCTACATTCCATCTTGGTGATTAAACTTCAGGAGTTGATTCGCAATGGAACTAAGTTGGCTTTAGAACAACTTGTGACAACCATTGCCTCAGTTGCCGATACAATAGAAGAAAAATTTGTCCCATATTATGATATATTTATGCCCTCACTAAAGCACATTGTTGAGCTTGCCATTCAGAAGGACCTCAAGCTTCTGAGAGGAAAAACTATTGAGTGCATTAGCCATGTTGGCCTTGCTGTTGGGAAGGAAAAATTTTTGCAGGATGCATCAAATGTGATGCAGCTGTTGTTGAAGACACAATCAGATTTAAATAATATGGAAGATGATGACCCTCAGACCTCGTACATGGTTTCAGCTTGGGCTAGAATGTGTAAAATTCTTGGAAAAGATTTTCAACAGTACCTACCACTGGTTATTGAGCCTCTTATTAAGACTGCTTCGGCTAAACCTGATGTTGCTCTCCTAGACACACAAGATGTTGAGAACATGAGTGATGATGATGGCTGGCAATTTGTGAATCTTGGAGACCAGCAAAGTTTTGGAATTAAAACTTCAGGACTTGAAGCAAAAGCAACTGCTTGTCAGATGTTGGTTTACTATGCTAAGGAGTTAAAAGAAGGATTTGTGGAATATACAGAACAAGTTGTGAAACTTATGGTTCCTTTACTGAAATTTTATTTCCATGACAATGTTCGAGTGGCAGCAGCAGAATCCATGCCTTTTCTCCTGGAATGTGCAAAACTGCATAGCCCAGAGTATCTTTCACAGATGTGGCAGTTTATATGTGATCCCTTAATCAAGGCTATTGGGACTGAACCTGATACAGATGTACTCTCAGAAATAATGAATTCTTTCGCAAAGTCCATTGAAGTAATGGGAGATGGTTGCCTTAATGATGAACATTTGGAAGAACTGGGAGGAATATTGAAAGCAAAACTTGAGGGACACTTTAAAAACCAAGAATTGCGACAGGTGAAGAGACAGGAAGAAAACTATGACCAACAGGTTGAGATGTCTCTGCAAGATGAGGATGAATGTGATGTTTATATTCTGACCAAAGTATCAGATATTTTGCACTCATTATTTAGTACTTACAAGGAAAAGATTTTACCATGGTTTGAACAGTTACTTCCATTAATTGTCAATCTAATTTGTTCAAGTAGGCCATGGCCAGACAGGCAGTGGGGACTGTGCATATTTGATGATATCATAGAGCACTGCAGTCCAACTTCATTTAAATATGTAGAATATTTTCGGTGGCCAATGCTGCTAAATATGAGAGATAACAACCCTGAAGTCAGGCAAGCTGCTGCTTATGGCCTGGGTGTTATGGCACAGTTTGGTGGCGATGATTATCGTTCTTTATGTTCAGAAGCTGTTCCACTGCTGGTAAAAGTTATTAAGTGTGCAAATTCCAAAACCAAAAAAAATGTCATTGCTACAGAGAACTGTATCTCAGCAATAGGGAAGATTTTGAAGTTTAAGCCTAACTGTATAAATGTGGATGAAGTTCTTCCACATTGGTTATCATGGCTTCCACTGCATGAAGATAAAGAGGAAGCTCTTCAGACTTTGAGTTTTCTCTGTGACTTAATTGAAAGTAACCACCCAGTTGTAATTGGTCCAAATAATTCCAATCTCCCCAAAATAATTAGTATAATTGCCGAAGGAAAAATTAATGAGACTATTAACTTTGAAGATCCTTGTGCCAAACGCCTAGCTAATGTCATCCGACAGGTACAGACTTCTG |
| >XM_017343561.1 |
| CGGTGACCTCTCTGAGTCATGGGGGCAGAACTGTGGGGTTAATGACATCCCAAGACTGGAGCGACCATAGTGCCAAGAACAGCTTTGACTACTGTGGTTCCGGGGAGAAACCTTTCCAGGACCCATGTACGGCCACAGCTGTTTTCCCTGATCTGCATCCTTGCAGCACCCACGGGAAGGAAATTCCTAAGCAAGGAACACTGCTCAAGAAGTACTGTACCATGTCTCCAAATCCCTGAGAATCAAGCTGAAAAACTGGAAGCAACACAAACTGAACGGAAACCTATGAAAATATCCCGGGCCAGTCAAAGATCACATTCCTCTTACAAGCCATCAGAAATACAGCCGCTGCGGAGGAGGCGAGACAAATGGCTGCCGTTCTCCTCAGACGTCTTTTGTCCTCTGCATTTGATGAAGTCTATCCAGCTCTTCCGTCTGAGGTCCAGACTGCCATCAAGAGTGAACTACTGATGATTATACAGATGGAAACACAATCTAGCATGAGGAAGAAAATTTGTGATATTGCTGCAGAACTGGCCAGGAATTTAATAGATGAGGATGGCAACAACCAGTGGCCTGAAGGGCTGAAGTTCCTTTTCGACTCAGTCAGCTCTCAGAATATGGGTCTGCGGGAGGCTGCTCTGCACATTTTCTGGAACTTTCCTGGAATTTTTGGGAACCAACAACAGCACTATTTAGACGTCATCAAGCGGATGCTAGTTCAATGTATGCAAGATCAGGAATATCCATTGATCAGGACATTATCTGCTAGAGCTACAGCTGCATTTATACTTGCAAATGAGCATAATGTTACTCTGTTCAAACATTTTGCAGACTTGTTACCCGGATTCTTACAGGCTGTAAACGACTCGTGCTACCAGAATGATGATTCAGTGCTAAAATCCCTCGTTGAGATTGCAGATACCGTTCCAAAGTATTTACGTCCTCACTTGGAAGCAACTCTACAGCTAAGTCTAAAGCTGTGTGGAGACACTAGCCTCAACAATATGCAGCGCCAGCTTGCACTGGAAGTCATCGTGACCCTGTCTGAGACCGCAGCTGCTATGTTAAGGAAGCATACTAGTATTGTTGCACAGACTATTCCCCAGATGTTAGCAATGATGGTTGATCTGGAAGAGGATGAGGACTGGGCGAATGCTGATGAACTAGAAGATGATGACTTTGACAGCAACGCAGTTGCTGGTGAAAGTGCGTTAGACCGAATGGCTTGCGGACTCGGTGGGAAGCTCGTTCTACCGATGATTAAAGAACACATCATGCAAATGCTTCAAAATCCTGACTGGAAATATCGGCATGCGGGACTGATGGCTTTGTCTGCCATTGGTGAAGGTTGTCACCAGCAGATGGAAGGAATTCTAAACGAGATTGTGAATTTTGTTTTACTTTTCCTTCAGGATCCTCACCCTAGAGTAAGGTATGCAGCCTGCAATGCTGTGGGACAGATGGCCACCGATTTTGCACCTGGTTTCCAAAAGAAATTTCATGAGAAGGTGATTGCCGCTCTGCTGCAGACGATGGAAGACCAAGGCAACCAGCGGGTACAGGCCCACGCAGCTGCAGCACTCATTAATTTCACTGAAGATTGTCCCAAGGCACTGCTTATTCCCTACCTAGATAACTTGGTGAAACATCTGCATTCCATTATGGTCCTTAAACTTCAAGAGTTGATTCAGAAAGGCACAAAGTTAGTTTTGGAACAAGTTGTGACGTCCATTGCATCAGTTGCAGATACTGCAGAAGAAAAATTTGTCCCGTACTATGACTTATTTATGCCATCGCTGAAGCACATTGTTGAAAATGCAGTTCAAAAGGAGCTCAGACTTCTGAGAGGGAAAACGATTGAATGCATCAGCCTGATTGGTCTGGCTGTTGGGAAGGAAAAGTTTATGCAAGATGCATCAGATGTTATGCAGCTGTTGTTAAAGACCCAGACAGACTTCAACGATATGGAAGATGATGATCCTCAGATCTCTTACATGATCTCAGCGTGGGCCAGAATGTGCAAAATCCTGGGAAAAGAATTCCAGCAGTACCTTCCCGTGGTGATGGGGCCCTTAATGAAGACAGCTTCGATTAAGCCTGAAGTAGCCCTTCTAGATACACAAGACATGGAGAATATGAGTGATGATGATGGTTGGGAATTTGTGAATCTTGGAGATCAACAGAGTTTTGGTATAAAAACTGCAGGACTAGAAGAAAAATCTACTGCTTGCCAGATGTTGGTTTGCTATGCTAAGGAGTTAAAGGAAGGTTTTGTGGAATACACCGAACAGGTTGTCAAGCTGATGGTCCCTTTACTGAAATTTTATTTCCATGATGGTGTTCGTGTGGCAGCAGCAGAATCCATGCCCCTTCTCCTGGAGTGTGCAAGAGTCCGGGGTCCTGAGTATCTCACACAGATGTGGCATTTTATGTGTGACGCCCTCATCAAGGCCATTGGCACAGAACCAGATTCAGATGTTCTTTCAGAAATAATGCATTCATTTGCAAAGTGCATTGAAGTAATGGGAGATGGATGCCTTAATAATGAACACTTTGAAGAACTGGGAGGGATATTGAAAGCAAAACTTGAAGAACATTTTAAAAATCAAGAACTGCGGCAAGTTAAAAGACAAGATGAAGATTATGATGAGCAGGTTGAAGAGTCACTGCAAGATGAGGATGATAATGATGTTTATATCCTGACTAAAGTGTCAGATATTTTACATTCAATATTCAGCAGCTACAAGGAAAAGGTGTTACCATGGTTTGAACAGCTGCTCCCATTAATTGTCAACCTAATTTGTCCACATCGGCCATGGCCAGACAGACAGTGGGGATTGTGCATCTTTGATGATGTTATCGAGCACTGTAGTCCAGCCTCATTTAAGTACGCAGAATATTTCTTAAGGCCAATGCTCCAATACGTATGTGACAATAGCCCGGAAGTCCGGCAAGCAGCCGCATATGGCCTGGGAGTCATGGCACAGTACGGTGGTGATAACTACCGCCCTTTTTGTACAGAAGCCCTTCCACTGCTTGTAAGAGTTATTCAGTCTGCAGATTCTAAGACCAAAGAAAATGTCAATGCCACTGAGAACTGCATCTCAGCAGTGGGGAAAATCATGAAGTTTAAGCCTGACTGTGTAAACGTTGAAGAGGTCCTACCACACTGGTTGTCTTGGCTTCCACTACATGAAGATAAAGAAGAAGCTGTTCAGACTTTCAATTACTTGTGTGACCTGATTGAAAGTAATCACCCAATCGTTCTTGGCCCAAACAATACCAATCTGCCCAAAATATTCAGTATTATTGCAGAGGGAGAAATGCATGAGGCAATTAAACATGAAGATCCTTGTGCCAAACGTTTGGCTAATGTAGTTCGCCAAGTACAGACTTCTGGAGGACTGTGGACTGAGTGCATAGCACAGCTCAGTCCCGAGCAGCAGGCAGCCATCCAGGAGCTCCTGAACTCTGCCTGACGGGCCTCCATATCACCCACCGGAAAACTATCTCCAAATAAACGTTTACCCTTTTGTTTAGGTTTCTTTGTTTTGTTTTTGAGCAAACGAGAGCGGTAGTGTTGTGTGTAGGCCATTCTCCTGGAGAGCCGCAGCAGCAAGAGCAGCCCCTGTGTTGCCCAGTGGAGTTTCCGTGGATTTCTCTCAGGCCACTGAAGAGTCCCTGTAAGCCCTACGGTAGCACTGCAGAGTATTTTTCTATTGGTGTAACCCACCCATGTGAAAGGAAAAGGAAAGAATTAATTTTTCTCATTAGACATAAGGACATGTAAGAAAAAACAGCTTTAAGATCAGTTACTCAGTGTAGATGTGTTAAAACCAATTGCTCTACACTTGGTGTTCGTCCTATTAATTGAAGAGTGAATCCTTTGGTAGGGTAGAAAGAAACCTACCTAGCAAACCAGTAGACCCAAAAGTTGAAAGAAAAAAAAAAAAAACCTAAGTGACaaacagcaagcatgagattgtcttttgatgccacttttggttcTTTTTCCCAAAAGACTTAATGCAGTGACTCAGTGTGGAGGCTGTTCAGCTTCCAGCCCTTGAATGTGAAGTGTCGTTGGCATGTCTGGCAGTAGTCTCTCATTCACTCCTCAATAAACAAAGTTGAAACACAAAAG |
| PMID - Link | Title |
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