| Retrocopy Name | IPO5P1 |
|
| Species | Sus scrofa | |
| Coordinates | chr1:216107706-216110839 UCSC | |
| Strand | + | |
| Parental Sequence | NM_001244301.1 | |
| Parental seq. overlap | 2545 bp | |
| Parental seq. overlap (%) | 75.4% | |
| Genomic Region |
Intergenic |
|
| Retrocopy Summary | IPO5P1, located on chr1:216107706-216110839, is a retrocopy of the parental gene IPO5. Retrocopies of protein-coding genes, also known as processed pseudogenes, are intriguing genomic elements with implications in genome evolution and diseases. While some retrocopies are non-functional, there are examples of retrocopies (retrogenes) acquiring regulatory roles or exhibiting neofunctionalization unrelated to their parental genes. |
| Gene Name | IPO5 |
| Full Name | importin 5 |
| Also known as | - |
| Coordinate | chr11:67019299-67059375 |
| Strand | + |
| Gene summary | N/A |
| >IPO5P1 |
| GCAGGCAGAGGAAATCTATGAAAATATCCCAGGTCTGTGTAAGACTACATTCCTCTTAGATGCCGTCAGAAATAGAAGAGCAGGTTTTGAGGTGAGACAAATGGCTGCCGCACTGCTACGACGGCTTTTGTCATCTGGGTTTGAGGAAGTCTATCCAAATCTGCCTTCTGATGTTCAGAGGGACGTCAAGATTGAACTAATACTGGCCGTTAAGTTAGAAACACATGCTAGCATGAGGAAAAAACTTTGTGATATTTTTGCAGTGCTGGCGAGGAATTTGATAGATGAGGATGGCACTAACCACTGGCCGGAAGGTCTGAAGTTCCTTATTGATTCAATCCACTCTAAAAATGTTGTTCTATGGGAAGTTGCACTTCACGTTTTTTGGCACTTTCCTGGAATTTTTGGGAACCAAGAACGGCATGATTTGGATATCATCAAACGGTTGTTGGACCAGTGTATTCAAGATCAAGAACATCCAGCAATCAGGACATTATCTGCTAGAGCTGCAGCTGCATTTGTACTTGCTAATGAGAATAATATTGCTCTTTTCAAAGACTTTGCAGACTTGCTTCCTGGAATCTTACAGGCTGTGAATGATTCATGCTACCAGGATGATGATTCAGTGCTAGAGTCCCTTGTTGAGATTGCAGATACTGTACCTAAATATTTGGGTCCTTATTTAGAAGATACTCTTCAATTGAGTCTAAAGTTATGTGGAGACTCCAGACTTAGTAATCTGCAACGCCAGCTGGCTCTTGAAGTGATAGTGACTTTATCTGAAACTGCAACCCCAATGTTGAAAAAACATACAAATATTATTGCACAGGCAATTCCTCATATATTAGCAATGATGGTTGATCTTCAAGATGATGAGGACTGGGTAAATGCTGATGAAATGGAAGAAGATGATTTTGACAGCAATGCAGTTGCTGCTGAGAGTGCACTAGATAGACTGGCTTGTGGGCTCGGTGGAAAACTTGTTTTACCAATGACTAAGGAGCATATCATGCAGATGCTTCAGAGCCCTGACTGGAAATATCGACATGCTGGATTAATGGCCTTATCTGCTATTGGAGAAGGATGCCATCAGCAAATGGAATCAATTCTAGATGAAACAGTTAACTCTGTTTTGCTTTTTCTTCAGGATCCTCATCCAAGGGTGAGGGCTGCAGCCTGTACTACACTTGGACAGATGGCTACAGATTTTGCACCTAACTTCCAAAAGAAATTCCATGAGACGGTGATTGCTGCTCTGTTGCGTACCATGGAAAATCAAGGTAATCAGCGTGTACAGTCACATGCAGCTTCTGCACTTATTATTTTTATTGAAGACTGTCCCAAATCATTGCTTGTCCTATATTTGGATAGTATGGTGAGAAATCTACATTCCATCTTGGTGATTAAACTTCAAGAGTTGATTCGCAATGGAACTAAGTTGGCTTTGGAACAGCTTGTGACAACCATTGCCTCAGTTGCAGATACAATAGAAGAAAAATTTGTTCCATATTATGATATATTTATGCCCTCACTGAAGCATATTGTTGAGCTTGCTGTTCAAAAGGAACTCAAGCTTCTGAAAGGAAAAACTATTGAATGCATTAGCCATGTTGGTCTTGCTGTTGGGAAGGAAAAATTTATGCAAGATGCATCAAATGTGATGCAACTATTGTTGAAGACACAATCAGACTTAAATAATATGGAAGATGATGACCCTCAGACCTCTTACATGATTCCCGCATGGGCTAGAATGTGTAAAATTCTTGGAAATGATTTTCAACAGTACCTTCCACTAGTTATTGAGCCTCTTATTAAGACTGCTTCAGCTAAACCTGATGTTGCTCTCTTAGACACACAAGATGTGGAGAATATGAGTGATGATGATGGATGGCAATTTGTAAATCTTGGAGACCAGCAAAGTTTTGGAATTAAAACTTCAGGGCTTGAAGCAAAAGCAACTGCTTGCCAGATGTTGGTTTATTATGCTAAGGAGTTAAGGGAAGGATTTGTGGGATATACAGAACAAGTTGTAAAACTGATGGTTCCTTTACTGAAATTTTATTTCCATGACAACGTTCGAGTGGCAGCAGCAGAGTCCATGCCTTTTCTTCTGGAATGTGCACGAATTCGTGGCCCAGAGTATCTTTCACAGATGTGGCAGTTCATATGTGATCCCTTAATCAAGGCTATTGGGACTGAACCTGATACAGATGTACTCTCAGAAATAATGAATTCTTTTGCAAAGTCCATTGAAGTAATGGGAGATGGGTGCCTTAATGATGAACACTTGGAAGAGCTGGGAGAAATACTAAAAGCGAAACTTGAAGGGCACTTTAAAAACCAAGAATTGAGACAGGTTAAAAGACGGGAAGAAAACTACGACCAACAAGTTGAAATGTCTCTGCAAGATGAGGATGAATGTGATGTTTATATTCTGACCAAAGTATCAGATATTTTGCACTCATTATTTAGTACTTATAAAGAAAAGATTTTACCATGGTTTGAACAGCTGCTTCCATTAATTGTAAATCTAATTTGTTCTAACAGGCCATGGCCAGACAGACAGTGGGGATTGTGCATATTTGATGATATCATAGAACACTGCAGTCCAACCTCATTTAAATACGTGGAACATTTTCGGTGGCCAATGCTGCTAAATATGCGAGACAACAACCCTGAAGTCAGGCAAGCTGCTGCTTATGGCCTGGGTGTTATGGCGCAGTTTGGTGGAGATGATTATCGTTCTTTATGTTCTGAAGCTGTTCCGCTGCTGGTAAAAGTTATTAAGTGTGCAAACTCCAAAACCAAAAAAAATGTCATTGCTACAGAGAACTGTATCTCAGCAGTAGGGAAGATTTTGAGGTTTAAGCCTAACTGTGTAAATGTAGATGAAGTTCTTCCACACTGGTTATCATGGCTTCCATTGCATGAGGATAAAGAGGAAGCTATTCAGACTTTGAGTTTTCTCTGTGACTTAATTGAAAGTAACCACCCGGTTGTACTTGGTCCAAATAATTCTAATCTTCCAAAAATAATCAGTATAATTGCAGAAGGGAAAATTAATGAGACTATTAACTATGAAGAGCCTTGTGCCAAACGCCTAGCTAATGTTGTGCGTCAGGTACAGACTTCTG |
| >NM_001244301.1 |
| CTCTCTCTCACGCCTAGCGCAATGGCGGCGGCCGCGGCGGAGCAGCAACAGTTCTACCTGCTCCTGGGAAACCTGCTCAGCCCCGACAATGTGGTCCGGAAACAGGCAGAGGAAACCTACGAGAACATCCCAGGCCAGTCGAAGATCACATTCCTCTTACAGGCCATCCGAAATACAACAGCTGCTGAGGAGGCTAGACAAATGGCTGCTGTTCTCCTAAGACGTCTTTTGTCCTCTGCGTTTGATGAAGTCTATCCAACTCTTCCCACTGATGTTCAGACTGCCATCAAGAGTGAGCTACTAATGATTATTCAAATGGAAACACAGTCTAGCATGAGGAAAAAAATTTGTGATATTGCGGCAGAGTTGGCCAGGAATTTAATAGATGAGGATGGCAACAACCAATGGCCTGAAGGTTTGAAGTTCCTTTTTGATTCAGTCAGCTCTCAAAACATGGGACTGCGGGAAGCTGCCCTTCATATTTTCTGGAACTTTCCTGGAATTTTTGGGAATCAACAGCAGCACTACTTAGACGTCATCAAACGGATGTTAGTTCAATGTATGCAAGATCAGGAACATCCTTCGATCAGGACATTATCTGCTAGAGCTACTGCTGCATTTATACTTGCAAACGAGCATAATGTTGCTCTGTTCAAACATTTTGCAGACTTGTTACCTGGATTCTTACAGGCTGTAAATGACTCATGCTACCAGAATGATGATTCAGTCCTAAAATCCCTTGTTGAGATTGCAGACACTGTTCCAAAGTATTTGCGTCCTCATTTGGAAGCTACTTTACAGCTAAGTCTGAAGTTGTGTGGCGACACTAGCCTCAATAATATGCAGCGCCAGCTTGCCCTTGAAGTAATTGTGACCCTGTCTGAGACTGCGGCTGCTATGTTAAGAAAACACACCAGTATTGTTGCACAAACTATTCCTCAGATGTTAGCAATGATGGTTGACCTTGAAGAGGATGAGGACTGGGCAAATGCAGACGAACTAGAAGACGACGATTTTGACAGCAATGCGGTTGCTGGTGAGAGTGCGCTGGACAGAATGGCTTGTGGACTCGGTGGAAAGCTTGTCCTGCCGATGATCAAGGAACACATCATGCAGATGCTTCAGAATCCTGACTGGAAGTATCGCCATGCAGGATTGATGGCCTTATCCGCCATTGGCGAGGGCTGCCACCAGCAAATGGAAGGGATTCTGAATGAGATAGTCAATTTTGTTTTGCTCTTTCTTCAGGATCCTCACCCCAGAGTGAGGTATGCAGCCTGCAATGCCGTGGGACAGATGGCTACAGATTTTGCACCTGGTTTCCAAAAGAAATTCCACGAGAAGGTGATTGCAGCACTGCTGCAGACCATGGAAGACCAAGGCAACCAGCGGGTGCAGGCCCACGCAGCCGCTGCTCTCATTAACTTCACTGAGGACTGTCCCAAGTCGCTACTTATTCCCTATTTAGATAATTTGGTGAAACATCTGCATTCCATCATGGTGCTTAAACTTCAAGAGTTGATTCAGAAAGGCACCAAATTGGTTTTGGAACAAGTTGTGACGTCTATCGCATCAGTTGCAGATACTGCAGAAGAAAAATTTGTCCCCTACTATGACTTATTTATGCCGTCACTGAAGCACATTGTTGAGAATGCAGTTCAAAAGGAACTCCGGCTTCTCAGAGGGAAAACTATTGAATGCATCAGCCTCATTGGTCTGGCTGTTGGGAAGGAGAAATTCATGCAAGATGCATCAGATGTGATGCAGCTCCTACTGAAGACCCAGACGGACTTCAGTGACATGGAAGACGACGACCCTCAGATCTCTTATATGATCTCAGCATGGGCCAGAATGTGCAAAATCCTTGGAAAGGAATTTCAGCAGTACCTTCCAGTGGTCATGGGGCCTTTAATGAAGACAGCTTCAATTAAGCCTGAAGTAGCCCTTTTAGATACCCAAGACATGGAAAACATGAGTGATGATGATGGTTGGGAATTTGTGAACCTTGGAGATCAGCAGAGTTTTGGTATTAAAACTGCAGGACTTGAAGAAAAGTCAACTGCTTGCCAGATGCTGGTTTGCTATGCTAAGGAGTTAAAAGAAGGCTTTGTGGAGTACACTGAACAGGTTGTCAAACTCATGGTCCCTCTACTGAAATTTTATTTCCACGATGGTGTTCGAGTGGCAGCCGCAGAATCCATGCCTCTTCTCCTGGAATGTGCAAGAGTCCGTGGTCCTGAGTATCTCACACAGATGTGGCATTTCATGTGTGATGCTCTAATCAAGGCCATTGGCACAGAACCAGATTCAGATGTCCTCTCAGAAATAATGCATTCCTTTGCAAAGTGCATTGAAGTCATGGGAGACGGTTGCCTTAATAATGAACACTTTGAAGAGTTGGGAGGTATATTGAAAGCTAAACTAGAAGAACATTTCAAAAATCAAGAATTGCGGCAAGTTAAAAGACAAGATGAAGACTATGATGAACAGGTGGAAGAATCACTACAAGATGAGGATGATAATGATGTTTATATTCTGACCAAAGTGTCAGACATTTTACACTCAATATTCAGTAGCTACAAGGAAAAAGTGTTACCATGGTTTGAACAGCTGCTTCCGTTAATCGTCAACCTAATTTGTCCACACAGACCATGGCCAGACCGACAGTGGGGATTGTGCATCTTCGATGATGTCGTAGAACACTGTAGTCCAGCCTCGTTTAAATACGCAGAGTATTTCTTAAGGCCGATGCTGCAGTACGTGTGTGACAGCAGCCCAGAAGTCAGGCAGGCGGCTGCGTATGGCCTCGGCGTCATGGCACAGTATGGCGGAGACAACTACCGTCCTTTCTGCACAGAAGCCCTTCCGCTGCTGGTAAGAGTTATTCAGTCTGCTGATTCTAAGACCAAAGAAAATGTCAACGCTACAGAGAACTGCATCTCGGCAGTGGGGAAGATTATGAAGTTCAAGCCTGACTGTGTGAACGTGGAAGAAGTCCTGCCACATTGGCTGTCTTGGCTTCCACTACATGAGGATAAAGAAGAAGCTGTTCAGACTTTCAACTATTTGTGTGACCTGATTGAAAGTAATCACCCGATTGTTCTTGGCCCAAACAATACCAATCTGCCCAAAATATTCAGCATAATTGCAGAAGGAGAGATGCATGAGGCAATTAAACATGAAGATCCTTGTGCCAAACGTCTGGCTAATGTAGTTCGCCAGGTACAGACGTCTGGAGGCCTGTGGACTGAATGCATAGCACAGCTCAGCCCTGAGCAGCAGGCGGCCATACAGGAGCTCCTGAACTCTGCTTGAAGGGCCTTAATCCCACCACCAGAAAACCAACTCCAAATAAACATTTACCCttttgttta |
| PMID - Link | Title |
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