| Retrocopy Name | CHMP1 |
|
| Species | Rhinopithecus roxellana | |
| Coordinates | chr8:106034916-106036108 UCSC | |
| Strand | - | |
| Parental Sequence | XM_030934273.1 | |
| Parental seq. overlap | 981 bp | |
| Parental seq. overlap (%) | 17.4% | |
| Genomic Region |
Intergenic |
|
| Retrocopy Summary | CHMP1, located on chr8:106034916-106036108, is a retrocopy of the parental gene CHM. Retrocopies of protein-coding genes, also known as processed pseudogenes, are intriguing genomic elements with implications in genome evolution and diseases. While some retrocopies are non-functional, there are examples of retrocopies (retrogenes) acquiring regulatory roles or exhibiting neofunctionalization unrelated to their parental genes. |
| Gene Name | CHM |
| Full Name | N/A |
| Also known as | CHM |
| Coordinate | chr7:142720842-142913972 |
| Strand | - |
| Gene summary | N/A |
| >CHMP1 |
| TTAAAGAAGGGAGGAGGTTTAATATTGATCTGGTATCAAAACTGCTGTATTCTCAAGGATTGCTAATTGATCTTTTAATCAAATCAGATGTTAGTCGttatatagaatttaaaaatgtcaCTAGGATTCTTGCATTTCGGGAAGGAAAGGTAGAACAAGTGCCTTGTTCCAGAGCAGATGTCTTTAATAGCAGGGAACTCACCATGGTTGAAAAGAGGATGCTAATGAAATTTCTCACATTTTGTTTAGAGTATGAACAACATCCTGATGAATACCAAGCTTTCAGGCAGTGTTCATTTTCAGAatacttaaaaactaaaaaactaacTCCCAACCTTCAACATTTTGTACTGCACTCAATTGCAATGACATCAGAATCATCTTGCACTACAATAGATGGCCTTAACGCAATTAAAAACTTCCTTCAGTGTCTCGGACGGTTTGGCAACACTCCCTTTTTATTTCCCTTATATGGCCAAGGAGAAATTCCCCAGTGTTTCTGTAGGATGTGTGCAGTTTTTGGTGGAATCTATTGTCTTCGTCATAAAGTACAATGCTTTGTAGTCGACAAAGAATCTGGACGATGTAAAGCAATTATAGATCACTTTGGTCAAAGaataaatgctaaatattttattgtggaagacagttacCTTTCTGAGGAAACATGCTCAAATGTGCAGTATAAGCAGATCTCTAGGGCAGTACTTATTACAGATCAGTCTATACTAAAGACAGATTCAGATCAGCAGACTTCCATTCTGATAGTTCCTCCAGCAGAGCCAGGAGCTTGTGCTGTACGGGTCACAGAATTATGTTCTTCAACCATGACATGCATGAAGGACACCTATCTGGTACATTTGACATGTTCATCTTCTCAAACAGCAAGAGAAGACTTAGAATCAGTGGTGAAGAAATTATTCACTCCATATACTGAAACAGAAATAAGCAAGGAAGAACTTACGAAGCCAAGACTCTTGTGGgctctttattttaatatgaGAGATTCCTCGGGAATCAGCAGAAGCTCATATAATGGCTTGCCTTCCAATGTTTATGTCTGCTCTGGGCCTGACTGTGGCCTGGGAAATGAGCACGCTGTCAAGCAAGCTGAAACACTTTTCCAGGAGATCTTTCCAACTGAAGAATTCTGCCCTCCACCTCCAAATCCAGAAGACATTATCTTTGATGGC |
| >XM_030934273.1 |
| GGCAGTTACAGGGAGGGGCTTGGACCCGCAGTGCTTATCGCCATTTGAGTAGGGGTTGATCTGGTCGATGCTGATTGCTGAGGTTGGTTGCTGCGGTGATTCCTGTTAATTTCCTTAGAGGGAAGTGGATGTGCAGTGTCATGAAATGGAGGGTCGGGATTTTATCAACGGAGACGACTTTGGCAAGACATTATGATTACTTCCTTATTGATTTCAAGGTTTGCCTGAATCCATCATTGCAGCTGCATGTTCAAGAAGTGGCCGCAGAGTTCTACATGTTGATTCAAGAAGCTACTATGGAGGAAACTGGGCCAGTTTTAGCTTTTCAGGACTATTGTCCTGGCTAAAGGAACACCAGGAAAACAGTGACATTGAAAATGACAGTTCAGTGTGGCAAGACCAGATCCTTGAAAATGAAGAAGCCATTGCTCTTAGCAGGAAGGACAAAACTATTCAACATGTGGAAGTATTTTGTTATGCCAGGATTTGCATGAAGATGTAGAAGAGGCTGGTGCACTGCAGAAAAATCATGCTCTTGTGACATCTGCAAACTCCACAGAAGCTGCAGATTCTGCCTTCCTACCTGTGGAGGATGAGTCATTAAGCACTATGAACTGTGAAATGCTCACAGAACAAACTCCAAGCAGTGATCCAGAGAATGTGCTAGAAGTAAATGGTGCTGAAGTGacaggggaaaaagaaaaccattgtGATGATAAAACTTGTGTGCCATCAACTTCAGCAGAAGACGTGAGTGAAAATGTGCCTATAGCAGAAGATACCACAGAACAACGAAAGAAAGACAGAATTACTTACTCGCAAATTATTAAAGAAGGCAGGAGATTTAATATTGATTTAGTATCAAAGCTGCTGTATTCTCGAGGATTACTAATTGATCTTCTAATCAAATCTAATGTTAGTCGATATgcagagtttaaaaatattaccaGGATTCTTGCATTTCGAGAAGGACGAGTGGAACAGGTTCCTTGTTCCAGAGCAGATGTCTTTAATAGCAAACAACTTACTATGGTAGAAAAGCGAATGCTAATGAAATTTCTTACATTTTGTATGGAATATGAGAAATATCCTGATGAATATAAAGGATATGAAGATAttacattttatgaatatttaaaaactcaaaaattaaccCCCAACCTCCAATATATTGTCCTGCATTCAATTGCAATGACATCAGAGACAGCCAGCAGTACCATAGATGGTCTCAAAGCTACCAGAAACTTTCTTCACTGTCTTGGGCGATATGGCAACActccatttttgtttcctttgtatgGCCAAGGAGAACTCCCCCAGTGTTTCTGCAGGATGTGTGCAGTGTTTGGTGGAATTTATTGTCTTCGCCATTCAGTACAGTGCCTTGTAGTGGACAAAGAATCCAGAAAATGTAAAGCAATTATAGATCAGTTTGGTCAGAGAATTATCTCTGAGCATTTCCTCGTGGAGGACAGTTACTTTTCTGAGAACATGTGCTCACGTGTGCAATACAGGCAGATCTCCAGGGCAGTGCTGATTACAGATAGATCTGTCCTAAAAACAGATTCAGATCAACAGattTCCATTTTGACAGTGCCAGCAGAGGAACCAGGAACTTTTGCTGTTCGGGTCATTGAGTTATGTTCTTCAACGATGACATGCATGAAGGGCACCTatttgGTTCATTTGACTTGCGCATCTTCTAAAACAGCAAGAGAAGATTTAGAACCAGTTGTGCAGAAGTTGTTTATTCCATATACTGAAATGGAGatagaAAATGAACAAGTAGAAAAGCCAAGAATTCTGTGGGCTCTTTACTTCAATATGAGAGATTCGTCAGACATCAGCAGGAGCTGTTATAAAGATTTACCATCCAACGTTTATGTCTGCTCTGGCCCAGATTGTGGTTTAGGAAATGATAATGCAGTCAAACAGGCTGAAACACTTTTCCAGGAAATCTGCCCCAGTGAAGATTTCTGTCCCCCTCCACCAAATCCTGAAGACATTGTCCTTGATGGAGACGGTTTACAGCCAGAGGCTTCAGAATCCAGTACCATACCAGAGGCTAACTCAGAGACTTTCAAGGAAAGCACAAACCTTGGAAACCTAGAGGAGTCCTCTGAATAATGGATATACACTGAACTGGATACCCAACTTTGGAAATTTCTGCTGGTCTCAGAGTCTACTTGATAGAAGGACTGTTTGAAAAATGTTAGAAAGCAGCAACAATTATAAGGCAAAATAGGTAATAGAAATCCAAAAGGGGATTTTGCTTATAGAGGACGTTACAAGAACACACAACACTTATAAAGCACATTGACTTGCTCATTTTGAATACCAAACTTGTGTGACTAgcagatgaaaattataaatcagTTGATTCTCAGGAATGTAACTGTGGATATGAAAGTGATCCTATGCATTGTTAATAATTCCGTGGTCTTAGGACAATTTTGCTTACCACTATGGATCTTTGTTTGAAAGCCACATTTTCAGAACCAGCTCACATATTTTCTTTGgttatttgaattatattttctttatggaCAAGAGCATCATAACATAATGataaaaacatatagaaaaactAAAGTATCATGATCTAGATAGAAGCCTGTATTTGGAAtacagatttgttttgttttgttttgcttcctaTGTTGAGAAGCATTGAGAATGCTAATACAAAGGTGTTTAGACATTGTTACGAACAAGTCAGTAGTGTTTTTTAGTATCAGTAGtgatatttgtaaattatttacatattggGAAAGGTCaataatgaagaaatgaaagaatggaaggaaaggtGTGGATAGGCTCATTGATACTTGGATGTTCTGTCTGTCAAATAACTAGAGTATTAGGCTAATTGTCTACAGACCTAATTTAATCCTGGCTGTCCTTCTGATGATATGTGGTAAATTGTTTAACTTCTGAGCCTACGTTTCTCCATATATAAAGTGGAAATAGTATTACCATGCCTACTGTATGAGAATGGTTATGAAGACCAATGCAATGACATGTTTAGAATGGGTTTGCCAGAAGAAAATTGTTTTAGAATTTTCCCATTGACTTGATGAATCTCAGAAGTCTCATGCAGGAAATAATTGCTTGCTGTCAGTCAACAAACGAAATAGATCACAGCATTTTTATTGCATTaagctttttaaatgaaaatttctttttaaaattagtattttatagtCTTACATACACACCAGTAAAAATAGTAACAAGTAGAATTGTGGTTTTGAAATATTACTAAGGAAAACACTCTATAAATTGTTAATATTCCTTTTCTGGTAGGTAAACCTGCAACCACCAAGGGCTCCAAATTGTGTATGACAGTTGGCAAGCCCTAAAATACACTCTACATAAAAATGTTagggctgcctgtaatcccagcactttgggaggctgagacgggcagatcacttgaggtcaagagtttaagacaagcctggccaacatgacgaaaccccgtctctactaaaaatacaaaattttagttggatgtgatggcgggcacctgtaatctcaactactttggaggctgagataggagactcacttgaaccagggaggcggaggttgcagtgagccaagattgtgccactgcactccagcctgggtgacagagcgagactctgtctcaaaagaaaaaaaaaaaaaaaaaagttagggctGTACACAGGCAGCAAACCAAGCTACAGTGAAGTTGCctgtatttaaattttctcaaataGCCAAGCTCTGATGGTCTACTTTATTTGAGTAATAGTTTAGACTTACAATTGCctgtaaataaacaaatgaactcttagtttgtttttgtttttttttttttccccacaagatCTGACCTATATTGTCTGTCAGGAAGCCATGGCTCCAATGTAAAGTACATAGTTCTTACATACTTCAACTGCAGCTGGTCCCTGACCTCACCAGGTTTCAGAGATTTTCTTAAAGGAATCCAGCTGTGACAGGTCACAGATTCATGGGAAATGGAAAGAACCAAGGAACGTAGCTCTTGCTTCACCTTTCTACCCACTGCAGATGTAGTTCAAGCCAGAATAATGGAAGAACTTAACTTACTAGCCTCTCAGGCTGCTCCTATCCCTATCTCCCAGTGTACAGCCCCTCCCCATCTCTTTAGTCCCCTTTCCTTCGCTTCCCCTTTTATAATGTCACATAAATCAGGGACAGTAGGATCACATTATAACCTACTTTGTCACAGGGATTCGATTTTTCTTATATCAAATCATGTTTCCTGAAACCCAGCTGGGGCATATGCACTCAATGTCTAATACATACCTATTAATGTACCGGGTATTGGCCTTGCCCCTGGATATCAGCAATATATTATAAAAGGCTCCAGTAGATGAGACGATTGAGTCTGAGTACAATTACAGTAAATTCTGCCAATAAAGATATTGTACTGTTACGGTCTTAGAGTTAAGGCCACTCGAATGCAGTATGCACATTCATGTAAACAGACAATCAGGGTAGGCCTAGAATAACCACAAAAATTCTGTTGGCCTTACTGCAGCCGCCTATGTGTAGAACAATGGAGGAGATAGTTTGTGGTCCATTATTGTACCCTGTTTCATCCATTAGCTAGCATCAGAATCTCTCTTTCAGGTAATTTATTAAATACGattgaaatgtttaaaagttcTTGAACGTGATTCGTGATGATTAAAATATCATATGACTGATAAAAGACTTTAAGAACTTTAGATATGACCTGTTGCCTCAAAATGTAACAGAAATTATTCTTAGAGCTTTCTTTTTAGCTTTCCTAATTactgcaaataaatatttgtttttatagttttaaatctaaaaaatcttttggttttgttttaaaacctTAAACTAGAAGtcctattaataaaattaatatattgtaCATAGTGGAAAATTTTCAGtagctaatttaaattttcaaaaaatactaTTAAAGAATTTTGATTCATATATTTAAACTTCTTAGTTATGCATGCTTCTTATTAACCAAAAATGATAATACCATTCAGTGTAGTGATCAGTATGAGAACCAATACCTGATCCTATGTTGCTGTTGTATTTTTTCCTAGTTGGTGTGCCTGCTCAGAAAAACATAtactgtatgtgtatacatacctgtgtatatataaaaggtcaatttatatatttttatatagaaaaatgGAATAACAATTTCCCTACCTCCCATAATATGTATTTGTCCATATTAAAATAGCCACATTGATGATAATTTCTAGAACTAGTTTCTGAGATTGTCAGCCCTTCGTCTAAAATAATGGCAGTATTAATGATTGACTTCTGTCACTGCCATAGTTACCTAGATTGGCAGCCTTGGTAGCCTTTGTTCTAAAGTCCTAAAGAGTTCCCaaaaaatttgttgaaatttaattgctaaATAGTAGTTGGTGATTCTTTACATCAGGAATTGTAATAATTTTCTTGCAAGTAAGTTATTTACTGCTATTGATATTGAAGAATTTATCTTTTACtcagttaattttattatatgtatttcaaaaagcATGAATATATGATTATTcataaattgtacactttaacagtaagttttcaaaggaaataaagacttttaaatCCATTTCA 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