Retrocopy Name | CHMP1 |
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Species | Myotis myotis | |
Coordinates | scaffold_m19_p_21:2579900-2580047 UCSC | |
Strand | + | |
Parental Sequence | CHM_x3 | |
Parental seq. overlap | 130 bp | |
Parental seq. overlap (%) | 20.4% | |
Genomic Region |
Intergenic |
|
Retrocopy Summary | CHMP1, located on scaffold_m19_p_21:2579900-2580047, is a retrocopy of the parental gene CHM. Retrocopies of protein-coding genes, also known as processed pseudogenes, are intriguing genomic elements with implications in genome evolution and diseases. While some retrocopies are non-functional, there are examples of retrocopies (retrogenes) acquiring regulatory roles or exhibiting neofunctionalization unrelated to their parental genes. |
Gene Name | CHM |
Full Name | N/A |
Also known as | NULL |
Coordinate | scaffold_m19_p_4:102387656-102649602 |
Strand | - |
Gene summary | N/A |
>CHMP1 |
GTCTCCCTACAGAGTTTGATGTAATTATCATAGGGACAGGTTTGCCTGAATCCATCCTTGCGGCTGCATGTTCAAGAAGTGGGCAGAGAGTTCTACATGTTGATTCGAGAAGTTACTATGGAGGAAACTGGGCTAGTTTCACCTTTTC |
>CHM_x3 |
AAGCAATAGTCACATGACATGTTTCCTGTCAAGATGGCGGATGATCTCCCTTCGGAGTTTGATGTGATCGTAATAGGGACGGGTTTGCCTGAATCCATCATTGCGGCTGCCTGTTCAAGAAGTGGCCAGAGGGTTCTGCATGTTGATTCAAGAAGCTACTATGGAGGAAACTGGGCCAGTTTTAGCTTTTCAGGACTCTTGTCCTGGATAATGGAATACCAGGAAAACAGTGACATTGTGAATGAAAGCCCAGCATGGCAAGAACAGATCCTTCTAAATGAAGAAGCCATTGCTCTTAGCAAGTTGGACAAAACCATTCAACATGTGGAAGTGTTTTGTTATGCCAGTCAGGATATGCATGAAGGTGTCGAAGAGGCTGGTGCACTGCAGAAAAATCACTCTCCAATGACATCTGCGAACTCCACAGAAGCTGCAAATTCTGCCTGCCTGCCTACAGAAGATGAGTCATTAAGCACTGTGAGCGGTGAAGTGCTCACAGAACAAACTCCAGGGAGTGCCCTAGAAGTAAATGATGTTGAAGTGACCAGGGTGAAAGAAAGCGGTCGTGATAAAACTTGTATGCTGTCAACTTCAAAAGAGGGAACAAGTGAAAATGTGCCTATAGAAGAAGACATTGC |
PMID - Link | Title |
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No publications available for this retrocopy |