| Retrocopy Name | CHMP1 |
|
| Species | Ovis aries | |
| Coordinates | chr12:38357436-38358123 UCSC | |
| Strand | + | |
| Parental Sequence | XM_004022232.4 | |
| Parental seq. overlap | 563 bp | |
| Parental seq. overlap (%) | 11% | |
| Genomic Region |
Intergenic |
|
| Retrocopy Summary | CHMP1, located on chr12:38357436-38358123, is a retrocopy of the parental gene CHM. Retrocopies of protein-coding genes, also known as processed pseudogenes, are intriguing genomic elements with implications in genome evolution and diseases. While some retrocopies are non-functional, there are examples of retrocopies (retrogenes) acquiring regulatory roles or exhibiting neofunctionalization unrelated to their parental genes. |
| Gene Name | CHM |
| Full Name | N/A |
| Also known as | - |
| Coordinate | chrX:84045216-84294715 |
| Strand | - |
| Gene summary | N/A |
| >CHMP1 |
| GTAGATGGCCTTAAAGCAACAAAAAACTTTCTTCAGTGTCTTGGACGGTTTGGCAACACTCCCTTTTTATTTCCCTTATATGGCCAAGGCGAAATTCCCCAGTGTTTCTGCAGGATGTGTGCAGTTTTCGGTGGAATATATTGTCTTCGCCATAAAGTACAATGCCTTGTAGTTGACAGAGAATCTGGAagatgtaaagcaattatagatCACCTTGGTCAAAGGATAAATGCTAAATATTTCATTGTGGAGGATAGTTACCTGTCTGAGGAAACATGTTCCAGTGTGCAGTATAAGCAGATATCCAGGGCAGTGCTCATTACAGATCAGTCTGTCCTAAAGACAGATTCAGATCAGCAGATTTCCATTTTGATAGTACCTCCAGTGGAACCAGGAGCACATGCTGTCCGAATCATTGAATTATGTTCTTCAACCATGACATGCATGAAAGACACCTACCTGGTACATCTGACCTGTTCATCTTccaaaacagcaagagaagacTTAGAATCAGTGGTGAAGAAATTATTCACCCCGTATTCTGAGACAGAAGTAGACAAGGAAGAACTTCCAAAGCCAGGACTCTTGTGGGCTCTTTATTTTAACATGAGAGATTCCTCGGGAGTCAGCCGAAGCTCATATAATGGCTTGCCTCCCAACGTTTATGTCTGCACTGGGCCTGACTGTG |
| >XM_004022232.4 |
| TGACACGTTTCCTGTTAAGATGGCGGACAATCTCCCTTCGGAGTTTGATGTGATCGTAATAGGGACGGGTTTGCCTGAATCCATCATTGCAGCTGCATGTTCAAGAAGTGGCCAGAGGGTTCTGCATGTTGATTCAAGAAGCTACTATGGAGGAAACTGGGCCAGTTTTAGCTTTTCAGGTCTGTTGTCCTGGCTAAAGGAACACCAGGAAAACACTGATATTGTGAATGAATGCCCAGCATGGCAAGAGAAGATCCTTGAAAATGAAGAAGCTATTGCTCTTAGCAGGACAGACAAAACCATTCAACATGTGGAAGTGTTTTGTTATGCAAGTCAGGATTTGCATGAAGATGTGGAAGAAGCTGGTGCACTACAGAAAAATCACGCTTCTGTGACATCTGTGAACTGCACTGAAGCTGCAGATTCTGCCTGCCTGCCTATAGAAGATGAGTCATTAAGAACTACAAGCTGTGAAATACCGGCAGAACAAACTCCAAGCAGTGATCCAGATAGAGCCCTAGAAGTAAATGATGTTCAAGTgacaggggaaaaagaaaaccattgTGATGATAACACTTGTGTGCCCTCAActgcagaaaaggaaacaagtgAAAATGTGCCTGTGGCCGAAGACACAGCAGAACAGCCAAAGAAAAATCGGATTACTTACTCTCAAATCATTAAAGAAGGCAGGAGGTTTAATATCGATTTGGTATCAAAGCTATTGTATTCTCGAGGATTGCTGATTGATCTTCTAATCAAATCTAATGTTAGTCGATATGCAGAGTTCAAAAATATTACCAGGATTCTTGCATTTCGAGAAGGAAGAGTGAAACAGGTTCCTTGCTCCAGAGCAGATGTCTTTAATAGCAAACAACTTACTATGGTAGAAAAGCGAATGCTAATGAAGTTTCTCACATTTTGTATGGAGTATGAGGAACATCCTGATGAATATAAAGCCTATGAGGAAAttaaattttctgaatatttaaaaactcaaaaattaaCCCCCaacctccaatattttgtcctGCACTCAATGGCAATGACATCAGAGACAGGCAGCAGTACCATAGATGGTCTCAAAGCTACCAAAAACTTTCTTCAGTGTCTTGGACGATATGGCAACActccatttttgtttcctttgtatgGTCAAGGAGAACTTCCTCAGTGTTTCTGCAGAATGTGTGCAGTGTTTGGTGGAATCTATTGTCTTCGCCATTCAGTACAGTGCCTTGTTGTGGACAAAGAATCTGGAAAATGTAAAGCAATCATAGATCAGTATGGTCAGAGAATAATCTCTAAGCATTTCCTTGTGGAAGACAGTTATTTGTCTGAGAACACATGCTCACATGTGCAATACAGgcagatctcCAGGGCAGTCTTGATTACAGATAGATCTGTTCTCAAAACAGATTCAGATCAACAGatTTCCATTTTGACAGTGccagcagaggaaccaggaacTTTTGCTGTTCGAGTCATTGAGTTATGTTCATCAACAATGACATGCATGAAAGGCTCATatttGGTTCATTTGACTTGTACATCTTCTAAAACAGCAAGAGAAGATTTAGAACCAGTTGTGCAGAAATTGTTTACTCCATATACGGAAACAGAGATAGaaaatgaagaaattgaaaagCCAAGACTTCTATGGGGTCTTTACTTCAATATGAGAGATTCTTCAGATGTCAGCAGGAACTCTTATAATGATTTACCATCAAACGTTTATGTCTGCTCTGGCCCAGACTGTGCTTTAGGAAATGATAATGCAGTCAAACAGGCTGAAGCACTTTTCCAACAAATCTGCCCCAACGAAGACTTCTGTCCTCCCCCACCGAATCCTGAAGACATTATCCTTGATGGAGACAATTTACAACCAGAGGCTTCAGAATCCAGTGCCTTACCAGAGGCCAACTCAGAGACtcccaaagaaagctcaaatcTGAAAAACCCAGAGGAGCCCTCTAAGTAATGAGTATATGCCAAACTGGATACCACACTGTGGAAAATCCTCCTAGCCTGAGAGTCTTCTTGATGGAAGAACTGTTTGAAAAATGTTACAAGACAGCAGCCAGTTAACATGCAGAATTaccaagaaaaacaataaaagatatCCAAAAGGGGATTTTCCTTAAAGAGGACATTCTAAGACCACAAAACACTTTGTAAAGCACATTGACTTGCCTGCTTTAAGATACCAAACCTGTGGAATTAGcagataaaaattataaagtggATTGATTCCCAGAAATATAGCTATGTTTATGAAAGTGATCCTATGCCTTGTTAGTAATTCTGTGGTATTAGGACAGCTTTTGCCTGCCACTTTGCTTGAAAGCCACATATTTTGAATTGGCTCAAAAATTTCCTTTGATTATTTgagttatattttctttatggGTGTGAGCATTGTGACACAAATGATGAAAGTATATGAGTTTATGtagctgaaaaaaattaaagtattgtAATCCAAGCAGGAGCCTATCTTTGAAATAgaggtttgttttgttctttatctTGAAGAGAATTGAAGATACTATATTAAAGTAGACACTTTTACAAGCAAGGCATGAGtcccttgctgttgttgttttttttttttaatgttaatagtATTTGTATTTGAGTCCTGAACATTCTACAAAAGCTCAGTActggaaaatgaaaggaaagattTGAATAGGCTTCTTTGGTGTTTGGAAATTCTTTCTAGTTGAGTACCTGGAGCACTAACCTGATTGTCTATGGACCTAATTTTGTCCTAGCTATACTGATATTAGGCAAATATGATGATGATATTTGCAAATTGCCTAATATGATATTAGGGAAAATGTTTActttctgcacctcagtttctctACATGTCTACTGTATAAGAATTATTTTGAAGATATATGAAGTGCTATCCTTAGAATGATTTTTCTGGAATAAAagtgctttcagaattttctcatTGACTTGGGGGTGAATATCAGATCTCGTGCAGCAAATAGTTGCTTGCTGTCACTTCCCCCAATACAATAAATCATAGTGTTTTTATTGcattaagcttttaaaataaaaatctatttcttaaaTTAGTATTTAATAGTCTTATAGAAGAGTAAACATAGTAACATATAGAATTGTGGTTTTAAATCTTTATAAGGAAAACATTCTATAAACTCTTCATATTCCTTTTCTAGTAATTAGACCTGAAACCACCAATGACTCTAAACAGAATATGACAATTGATAAACCCTAATATGCacttaacataaaaatataaggGCTGTGAATAGACAGCAAATCTAGGTACAGTGAGTGCCTGTATTAAAATCTTTCCAAATGCTGAGCTCTGATGGTTTATCTTCTTTGAGCAATAGTTTGGACTTAACAacttatttgaataaataaattcattgaaAGTGTATTGTCATGCTGTCTGGCCGGTATTGCTGATCATAGAGCCATGGCTACAGTAGAAAGCACATAGTTCTTACATTCTTCAGCTGTAGCAGGGCTTTGACCTCTCCAGATTTCAGCCAGCTCTTTACGGTCACAGACTcatgagaaatggaaagaatgtaGCTCTTGCCTCACCTTTTAACCCCCCAGCAGGGTTTAAATTCAGCAGATATAGCTGAATCCAGAGGAAAACCTTCCAAGCCTCTCAGGCTACTCCTAACCCCTCTCCCCATTGCACAGCCTTTCCCCTATCTCTTTAATCCCCTCTATCCCTCTCTTCCCTTTTTATAATGTTATACAAATCAGGGACAATAGAATTACATTATAACCTACTTTGTTATGTGGATTCAGATCTGTCTTAAATTATATTTCCTGAAACCCAACTATGGTATGCACTGAATGCAAAATAGACACCTATAAGCACTGGGTATTGGTCCTGCCCTGCAGTACCAGCAATATAAAAGGTTCCACTATATGAGAGCATTGAGTTTGGATACAAATGCAGTAAGCTGCACCAATTAAAATATTGTACTTTGTTATAGTCTTAGAGTTAAGGCTTCTTGATACATCATGCACACTTATGTAAACAGCCAATCAGGGTAGACCCAGAATAACTAGAAAAATTCTGATAGCTTTACTACAGTTCTCTGAACAATGAAGGAGATATTCTGTGGTCTCATGGCCCAATCTATACTGTACCCTATTTCATCCATTAGCCAGTATCAGAATTTCTCTTCTGGATTATTTATTAATACTGTTGAAATGTTTAAAAGCTCCTGAATATCATTAGTGATGATTAAGATAATACACAGCTGTTTAAAACTTTGTGTTAGAAAACTTTAGATACTTCCTCTTGCCTCAGAATGTAATAGAAATTATTCTAAGAACATTCTTTTCAGCTGTCTTACTGCAAATACTTATTTTCAGAGCTTTAAAGAAAAGTCTTTCGGTTTTATTGTAAAACCGTAAGCATGAAGTCATATGAATAAAATTTAGATGTTTGTACATGATGCAGAAATTTCATTagctaattttaaattttgaaaattgctGTTATCAAAGAATTGTTATTCCTGTGTTTAAAATGTGTTATGCATGCTTCTTCTTAGCCAAAGTGATAATACCATTCAGTTTAGTCAGCAATATGAAAACAGATTACTAACCCTATGTTGCTACTGTATTTTTGTCTAGTTGGTATGCCTGCCcagaaaaacatacatatatatatataataaacatatatttttctacAGGAAAACTGAGTTATAATTTTCCCATCTACTATTATACTTAGCTGCTTATAGAAAAATGGTCATGTTAATGATTAACTTCTGGAATAGTAATTTCTGAGATTGGCAGCCCTCTGCCCAAAATAATGGGCATGCTAATGATTAACTTCTGTCACAGCTATAGTTCTGGAGAAAGCAAAGTATGTCTAAAGTCCTAAaaacctcaaaaaaaatttttttgttgaaatTTTATCACTATATAGTAATGATCCTTTAAAGCAATTTTCTTACAGATAAGTATTTACTGCCATTAGGATAATTTCTCTCAACTCTTGACTGATTTTCTTAAGTGCATTTCAGAAAGCATGAATATATGGTTATTCATAATTTGCACACTGTAACAGTAAGTTTTcagaggaaataaagtctgttttaATGCCTTTCA 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| PMID - Link | Title |
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