| Retrocopy Name | CHMP1 |
|
| Species | Callithrix jacchus | |
| Coordinates | chr19:41580210-41581428 UCSC | |
| Strand | + | |
| Parental Sequence | XM_035289369.1 | |
| Parental seq. overlap | 989 bp | |
| Parental seq. overlap (%) | 18.6% | |
| Genomic Region |
Intergenic |
|
| Retrocopy Summary | CHMP1, located on chr19:41580210-41581428, is a retrocopy of the parental gene CHM. Retrocopies of protein-coding genes, also known as processed pseudogenes, are intriguing genomic elements with implications in genome evolution and diseases. While some retrocopies are non-functional, there are examples of retrocopies (retrogenes) acquiring regulatory roles or exhibiting neofunctionalization unrelated to their parental genes. |
| Gene Name | CHM |
| Full Name | N/A |
| Also known as | - |
| Coordinate | chrX:81626295-81816870 |
| Strand | - |
| Gene summary | N/A |
| >CHMP1 |
| TCAACCAAATAGAAATAGGATTACTTACTCTAAAATAGTTAAagaaggaaggaggtttaatatTGATTTGGTATCAAAACTACTGTATTCTCAAGGATCACTAATTGACCTTTTAATCAAATCAGATGTTAGTCGTtatgtagaatttaaaaatgtcaCTAGGATTCTTGCATTTCGAGAAGGAAAGGTAGAACAAGTGCCTTGCTCTAGAGCTGATGTCTTTAATAGCAAGGAACTTACCATGGTTGAAAAGAGGATACTAATGAAATTTCTCACATTTTGTTTAGAGTATGAACAACATCCTGACGAATACCAAGCTTTTAGGCAGTGTTCATTTTCAGAgtacttaaaaactaaaaaattaactcCCAACCTTCAACATTTTGTACTGCACTCAATTGCAATGACATCAGAATCATCTTGCACTACAATAGATGGCCTTAATGCAACTAAAAACTTCCTTCAGTGTCTTGGACGGTTTGGGAACACTCCCTTCCTATTTCCCTTGTATGGCCAAGGAGAAATTCCCCAGTGTTTCTGTAGGATGTGTGCAGTTTTCGGTGGAATCTATTGTCTTCGTCATAAAGTACAATGCTTTGTAGTCGACAAAGAATCTGGAAGATGTAAAGCAATTATAGATCACTTTGGTCAAAGAATAAatgctaagtattttattgtgGAAGACGGTTACCTTTCTGAGGAAACATGCTTAAATGTGCAGTATAAGCAGATCTCCAGGGCAGTACTCATTACAGACAAGTCTATACTAAAGACAGATTCAGATCAGCAGACTTCCATTTTGATAGTTCCTCCAGCAGAACCAGGAGCTTGTGCTGTTCGGGTCACAGAACTATGTTCTTCAACCATGACATGCATGAAGGACACCTATCTGGTACATTTGACGTGTTCATCTTCTAAAACAGCAAGAGAAGACTTAGAATCAGTGGTGGAGAAATTATTCACTCCGTATGCTGATATAGAAATAAACAAGGAAGAACTTACAAAGCCAAGACTCTTGTGGgctctttattttaatatgaGAGATTCCTCAGGCATTAGCAGAAGCTCATATAATGGCTTACCTTCCAATGTTTATGTCTGCTCTGGGCCTGACTGTGGACTGGGAAATGAGCATGCTGTCAAGCAAGCTGAAACGCTTTTCCAGGAGATCTTTCCAAGTGAAGAATTCTGCCCTCCACCTCCAAATCCAGAAGACATT |
| >XM_035289369.1 |
| TTCCCGTCAAGATGGCGGATACTCTCCCCTCGGAGTTTGATGTAATCGTAATAGGGACGGAAGAAGCTACTATGGAGGAAACTGGGCCAGTTTTAGCTTTTCAGGACTGTTGTCCTGGCTAAAGGAATATCAGGAAAACAGTGACATTGTAAATGACAGTCCAGTGTGGCAATACCATATCCTTGAAAATGAAGAAGCCATTGCTCTTAGCAGGAAGGACAAAACTATTCAACATGTGGAAGTATTTTGTTATGCCAGTCAGGATTTGCATGAAGATGTCGAAGAAGCTGGTGCACTGCAGAAAAATCATGCTCTTGTGACATCTACAAACTCCACAGAAGCTGCAgattctgcctgcctgcctacggAGGATGAGTCATTAAGCACTGTGAGCTGTGAAATGCTCATAGAACAAACTCCAAGCAGTGATCCAGAGAGTGCGCTAGAAGTAAATGGTGCTGAAGTGacaggggaaaaagaaaaccattctGATGATAAAACTTGTGTGCCATCAACTTCAGCAGAGGAAATGAGTGACAATGTGCCTATAGCAGAAGATACCACAgagcaaccaaagaaaaataaaattacttactCGCAAATTATTAAAGAAGGCAGAAGATTTAATATTGATTTAGTATCAAAGCTGCTATATTCTCGAGGATTGCTAATTGATCTTCTAATCAAATCTAATGTTAGTCGATATgcagagtttaaaaatattaccagGATTCTTGCATTTCGAGATGGAAGAGTGGAACAGgTACCTTGTTCCAGAGCAGATGTCTTTAATAGCAAACAACTTTCTATGGTAGAAAAGCGAATGCTGATGAAATTTCTTACATTTTGTATGGAATATGAGAAATTTCCTGATGAATATAAAGGCTATGAAGAGATTACattttgtgaatatttaaaaactcaaaaattaaccCCCAACCTTCAATATATTGTCCTGCATTCAATTGCAATGACATCACAGACAGCCAGCAGTACCATAGATGGTCTCAAAGCTACCAAAAACTTTCTTCACTGTCTTGGGCGGTATGGCAACActccatttttgtttcctttatatgGACAAGGAGAACTCCCCCAGTGTTTCTGCAGGATGTGTGCTGTGTTTGGTGGAATTTATTGTCTTCGCCATTCAGTACAGTGCCTTGTAGTGGACAAGGAATCCAGAAAATGTAAAGCAATTATAGATCAGTTTGGTCAGAGAATAATCTCTAAGCATTTCCTCGTGGAGGACAGTTACTTTTCTGAGAACACATGCTCACGCGTGCAATACAGGCAGATCTCCAGGGCAGTGCTGATCACAGATAGATCTGTCCTAAAAACAGACTCAGATCAACAGaTTTCCGTTTTGACAGTGCCAGCAGAGGAACCAGGAACTTTTGCTGTTCGGGTCATTGAATTATGTTCTTCAACGATGACATGCATGAAAGGCACCTatttagTTCATTTGACTTGTACATCTTCTAAAACAGCAAGAGAAGATTTAGAACCAGTTGTGCAGAAACTGTTTATTCCATATACTGAAGTGGAGatagaAAATGAACAAGTTGAAAAGCCAAGAATTCTGTGGGCACTTTACTTCAATATGAGAGATTCGTCAGACATTAGCAGGAGCTGTTATAATGATTTACCATCCAACGTTTATGTCTGCTCTGGCCCAGACTGTGGTTTAGGAAATGATAATGCAGTTAAACAGGCTGAAACAATTTTCCAGGAAATCTGCCCCAGTGAAGATTTCTGTCCCCCTCCACCGAATCCTGAAGACATTGTCCTTGATGGAGACAGTTTACAGCCAGAGGCTAACTCAGAGACTCTCAAGGAAAGCACAAACCTTGGAAACCTAGAGGAGCCCTCTGAATAATGGATACATACTAAACTGAATACCCCACTTTGGAAATTTCTACTGGTCTCAGAGCCTGCTTGATAGAAGGACTGTTTGAAAAATGTTAGGAAGCAGCACCAATTATAAGGCAAAATAGGTAATAGAAATCCGAAAGGGGATTTTCCTGATAGAGGACATTCCAAAAACACACAACACGTATAAAGCACATTGACCTGCTCATTTTAAATACCAAACTTAAGTGACTAGcagatgaaaattataaatcattcgaTTCTCAGGAATGTAACTATGGATATGAAAGTGATCCTATGCACTGTTAATAATTTAGTGGTTTTAGGACAATTTTGTTTGCCACTTTGGGTCTTTGTTGGAAAGCCACATTTTCAGAACCAGCTCACgtattttctttgattatttaaattatagtttCTTTATTAATAACAGCATTATAACACAAGGataaaaacatatatagaaaAACTAAAGTATCATGATCTAGATAGAAGCCTGTATTTGGAatatgggtttgttttgttttgctttgctttctctgTTGAGAAGCATTGAAAATGCTAATATTAAGGTGTTTACACATTTTTATGAATAAGTcggtaatgttttctttttagtatcaGTGATAtttgtttgtaaattatttacatattggGAAGGgtcaataataaagaaatgaaagaatggaaggaaaggcATGGATAGACTCACTGGTATTTGGATGTTCTGTCTGTCAAGTAACTAGAGTACTAGGCTAATTGTCTACAGACCTAATTTAATCCTGGCTCTCCTACTGATGATATTTGGTAAATTGTTTTAACTTCTTGGCCTATGTTTCTCCATATATAGTAGTACCGTGCCTACTGTATGACAATGGTTATGAAGACAAATGCAGTGCCATCTTTAGTATGGCATCACTGGAAGAAAATTGTTTTAGAATTTTCCCATTGACTTGATGAATATCAAAAGTCTCACGCAGGAAATAATTGCGTGCTGTCAGCTTCAAACAAAATAGATCACAGCATTTTTATTGCATTaagctttttaaatgaaaatttctttttttaattagtattttataGTCTTACAGATGAGTAAAAATAGTAACAAGTAGAGTTGTGGTTTTGAAATCTGACTAAGGAAAACACTCTATAAATTGTTCCTGTTCCTTTTCTGGTAGGTAAACCTGCAACCACCCAGGACTTCAAGTTGAGTGTGACAGTTGGTAAGCCCTAATATACATGCTACATAAAATTTTAGGgctgccagtaatcccagcactttgggaagctgaggtggttagatcacttgaggtcaggagtttgagaccagcctggccaacatggcaaaaccctgcctctactaaaaatataaaattttagctgggtgtgatggtaggcacctgtaaccctagctatttgggaggcagaggttgcagtaagctgagattgtgccactgtactccagcctgggcaacagagctagactctgtctcaaaaaaaaaaaaaaaagttaggtctGTACATAGGCAGCAAACCTAGCTACAGTGACGTTGCCTATATTTAAGTTTTCTCAAATGGCCAAGCTCTGATGGTCTACTTTATCTGAGCAATAGTTTAGTCTTATAATTgcctgtaaataaataaatgaactctaaattttttttttcacaagatACAGCCCATATTGTCTATCAGTAAGCCATGGCTCCATTGTAAAGCACATAGTTCTTATATACTTCAAGTGGAGCTGGTCCCTGACCTCACCAGGTTTCAGAAATGTTCTTAAAGGAAGCTAGCTGTAGCATGTCACAGATTCATGGGATACGAAAGAACCAAGGAACATAGCTCATGCCTCTCCTTTCTACCCCCTGCAGATATAGTTGAAGCCAGAATAATGGAAGAACTAAACTTACTGGCCTCTCAGGCTGCTCTTGTTCCTACCTCCCAGTGTACAGCTCCTCCCCATCTCTTTAGTCTCCTTTCCTTCGCTTCCCCTTTTATAATGTCACATAAATCAGGACAGTAGGATCACGTTATAACCTACTTTGTCACAGGGATTCAGATTTTTCTTATATCAAATTGTGTTTCCTGAAACCCAGCTGGGGCATATGCACTCAATGTCTAATACATACCTATTTATGTACCGGGTATTGGCCTTGCCTCTGGATATCAGCAATACATTATAAAAGGTTCCACTAGATGAGACAATTGAGTCTGAATACAACTGCAGTAAATTGTGCCAATAAAGGTATTGCACTTTTATGGTCTTAGAGTTAAGGCCGCTTGAATGCAGCATGCACATTCTTGTAAACAGACAATCAGGATAGGCCTAGAATAACCACAAAAATTCTGATGGCCTTACTGCAGTCGCCTATATGTAGAATAATGAAGGAGATCGTTTGTGGTCCATTATTGTATGCCATTTCATTCATTAGCCAGCGTCAACATTTCTTTTTCaggtcatttattaaatattacagaaatgtttaaaagttGCTGAACATGATTCATGTATTATACAACTGCTAAAAGACTTTCAGAACCTTAGATACTTCCTGTTGCCTCAAAACGTAATAGAAATTATTCTTAGAGCTTTCTTTTTAGTTGTCCTAATTactgcaaataaatatttgttcttagAGTtttaagtcaaaaagaaaaatcttttggtTTTGTTATAAAACCTTAAGCTTGAAgtcatattaataaaattaatatgttgtACATAGTGGAAAATTTTCAGtagctaatttacattttcaaaaatgttatcaAAAAATTTTGattcatgtatttaaaatgtttttatgcatGCCTCTTATTAACCAAAAATAATACCATTCAGTTTAGTGATCAGTATGAGAACCAATACCTTATCCTATGTtgctattgtattttttctagttgGTGTACCTGCCCAGAGAAACATATactgtatgtgtatacatacatatgtatatataaaaggtcaatttatatatttttctacagGAAAATGTAGTAACAGTTTCCCTATCTCCCATAATATTTATTTGTCATAGTAAAATGGCCATGTTGATGGTAATTTCTAGAACTAGTTTCCAGGATTGTCAGCCCTTTGTCTAAAGTAATGGCAGTATTAATGATTGACTTCTGTCACTACCATAGTTACCTGGATTGGCAAGCCTTGGTACCCTTTGTCTAAAGTCTTAAAgagttccaaaaaaaaatttgttgcaATTTAATTGCTAAATAGTGGTTGGTGATTCTTTACAGTAGGAATTGTAATGATTTTCTTGCAAATAAGTTATTTACTGCTATTGACATTGAATAATTTGTCTTTTACTCcgctaattttattgtatttcaaaaagcatgaatatatgaatattcataaatAATACACTGTAACAAGTTTTCAGAGGCAATAAAGACTTTTCAATCCTTTTCA 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| PMID - Link | Title |
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