| Retrocopy Name | CHMP1 |
|
| Species | Oryctolagus cuniculus | |
| Coordinates | chr16:31560332-31561276 UCSC | |
| Strand | - | |
| Parental Sequence | XM_008272993.2 | |
| Parental seq. overlap | 781 bp | |
| Parental seq. overlap (%) | 15.5% | |
| Genomic Region |
Intergenic |
|
| Retrocopy Summary | CHMP1, located on chr16:31560332-31561276, is a retrocopy of the parental gene LOC103351917. Retrocopies of protein-coding genes, also known as processed pseudogenes, are intriguing genomic elements with implications in genome evolution and diseases. While some retrocopies are non-functional, there are examples of retrocopies (retrogenes) acquiring regulatory roles or exhibiting neofunctionalization unrelated to their parental genes. |
| Gene Name | LOC103351917 |
| Full Name | N/A |
| Also known as | CHM |
| Coordinate | chrX:76680731-76889882 |
| Strand | - |
| Gene summary | N/A |
| >CHMP1 |
| CAACAAAAGAGAAATAGGACTACTTATTCTCAAATAATTAAAGAAGAGAGGAGATTTAATATTGATTTGGTGTCAAAGCTGCTATATTCTCAAGGATCCTTAATTGATCTTTTAATCAAATCCAATGTTAGTCGTTATGCTGAATTTAAAAATGTCACCAGGATTCTTGCATATCGGGAAGGGAAGGTGGAACAGGTTCCTTGTTCTAGAGCAGATGTCTTTAATAGCAAAGAACTCACCATGGTTGAAAAGAGGATGCTAATGAAATTTCTTACATTCTGTCTAGACTATGAGCAGCATCCTGATGAATACCAAGATTTCAAACAATGTTCATTTTCAGAGTACTTGAAAGCTAAAAAACTAACCCCCAACCTCCAACATTTTGTGCTACATTCAATTGCAATGACATCAGAAACCTCATGTACTACATTAGATGGTCTTAAAGCAACAAAAATTTTTCTTCAGTGTCTTGGACGGTTCGGCAACACTCCCTTTTTATTTCCTGTGTATGGTCAAGGTGAAATCCCCCAGTGTTTCTGCAGAATGTGTGCAGTTTTTGGTGGAATCTACTGTCTTCGTCATAAAGTACAGTGTCTTGTAGTTGACAAAGAATCTGGAAGATGTAAAGCCATTATAGATCACTTTGGTCAAAGAATAAATGCTAAGTATTTTATCATGGAGGATAGTTACCTTTCTGAGGAAACATGCTCAAATGTGCAGTATAAGCAAATCTCAAGGGCAGTGCTCATCACAGATCAGTCTCTACTAAAGACAAATTCAGATCAGCAGATTTCCATTTTGATAGTGCCTCCAGTGGAAGCACAGACTTGTTCTGTCCGGGTCACAGAATTATGTTCTTCAACTATGACATGCATGAAAGACACATATCTGGTACATCTAACGTGTCCATCTTCAAAAACGGCACGAGAAGACCTAGAACCAGTG |
| >XM_008272993.2 |
| CATGACACGTTTCCTGTCAAGATGGCGGACAATCTCCCTTCGGAGTTTGATGTGATCGTAATAGGGACGGGTTTGCCTGAATCCATCATTGCGGCTGCATGTTCAAGAAGTGGACAGAGAGTTCTGCATGTTGATTCAAGAAACTACTATGGAGGAAACTGGGCCAGTTTTAGCTTTTCAGGACTGTTGTCCTGGATAAAGGAATACCAGGAAAATGGTGACACTACGAATGAAAGTTCACGGTGGCAAGAACAGGTCCTTGAAAATGAAGAAGCCATTGGTCTTAGCAAAAAAGATAAAACCATTCAACATGTGGAAGTATTTTGTTATGCCAGTCAGGATTTGCATGAAGATGTTGAAGAAGCTGGTGCATTGCAGAAAAATCACGCATCTGTGACATCTGCGAACTCCACAGAAGCTGCAGATTCTGCCTGCCTGCCTACAGAAGATGAGTCATTAAGCATCGTGAGCTGCGAAATGTCCGCAGAACAAACTCCAAGCAGTGATCCAGAGAGTGCCCCAGAAGTAAATGATGCTGAAGCAACAGGGGAGAAAGGCGACCATTGTGATGATAAAACTTCAGAAGAAGAAACAAGCACAAATGTGCCTACAGCAGCAGACACCATAGAGCAACCAAAGAAAAATAGGATTACTTACTCACAAATTATTAAAGAAGGCAGGAGATTTAATATTGATTTGGTATCAAAGCTGCTGTATTCTCGGGGATTGCTCATTGATCTTCTTATCAAATCTAATGTTAGTCGATATGCAGAGTTTAAAAATATTACCAGGATTCTTGCATTTCGAGAAGGAAGAGTGGAACAGGTTCCTTGTTCCAGAGCAGATGTTTTTAACAGCAAACAACTTAGTATGGTAGAAAAGCGAATGTTAATGAAATTTCTTACATTTTGCATGGAATATGAGGAACATCCTGATGAATATAAAGGCTATGAAGAGATTGCATTTTCTGAATATTTAAAAACTCAAAAATTAACCCCCAACCTGCAATATTTTGTCCTGCATTCGATTGCAATGACATCAGAGACAACCACCACTACCTTAGATGGCCTCAAAGCTACGAAAAACTTTCTTCACTGTCTTGGGCGATATGGCAACACTCCATTTTTGTTTCCTTTATATGGCCAAGGAGAACTCCCACAGTGTTTCTGCAGGATGTGTGCTGTATTTGGTGGAATCTATTGTCTTCGTCATTCAGTGCAGTGCCTTGTAGTGGACAAAGAATCCAGAAAATGTAAAGCAATCATTGATCAGTTTGGTCAGAGAATAATGTCTACGCATTTCCTAGTGGAAGATAGTTACCTTTCTGAGAACATGTGCTCACATGTGCAATATAGGCAGATCTCCAGGGCAGTCCTGATTACAGATAGATCTGTACTAAAAACAGATTCAGATCAACAGATTTCCATTTTGACAGTGCCAGCAGAGGAACCAGGAACTTCTGCTGTTCGGGTCATTGAGTTGTGTTCTTCAACGATGACGTGCATGAAAGGCACCTATTTGGTTCATTTGACTTGCACATCTTCTAAAACTGCAAGAGATGATTTAGAACCAGTTGTGCAGAAGTTGTTTACTCCATTTACCGAAATGGAAATAGAAAAGGAAGAAGTTGAAAAGCCAAGAATTCTATGGGCTCTTTACTTTAATATGCGAGATTCTTCAGACATCGACAGGAATTGTTATAAAGATTTGCCATCCAACGTTTATGTCTGCTCTGGCCCAGACTGTGCTTTAGGGAATGATAACGCAGTCAAACAGGCGGAAACACTTTTCCAGCAAATCTACCCCAATGAAGACTTCTGTCCACCCCCGCCAAATCCTGAAGACATCATACTTGATGGAGACAGTTCACAACCAGGGGCTTCAGAGTCCATTGCCATACCAGAGGCCAACTCAGAGACTCCGGAGGAAAGTGCAAACCTGGAAAACCCACAGGCACCCTCTGAATAACACATACACACAAAACTAGACACCTTGCTTTTGAAATCCTCTTGGCCTCAGTTTTCTTGATGGAGCAACTGTTTTGAGAAGTATTAGAAAGCAGCGACCAATTGACACATAGAATTACAAGGAGAAACAGGTCATAGAAATCCTAAAGGGGATTTTTTGTCTTGAAGAGGACATTCCAAGAACACAGAATACTTCTAAAGCACATTAATTTGCCTATGTTAAACCTGTGAGATAAGCAGATGAAATTAGAAATGGAGTGATTCCCAGGAATACAGCAGTCCTATGCATTGTCAGTAATTCTGTGCTGTTAGCACATTAGTTTGTCACTTTGTACCTTGGTTTGAAAGCCACAGCTTCAGAATCAGCTAACACATTTCCTTTGTGGATATGAGCATCATGACATAAATGATGAAAGCGTACATATTCAAGTATCATGATCCAGGCAGCAGCCTAGCCTGTGTTTGGAATAGATTTGTTTTCTCTGTTGAGATGTATTGAAGATATTAGGATGTTTGGATATTTTTATAAATCATAAGTCCATTACTTGGTAGTATTTTTAATATTAGTTGTGATATTTGTATGTGAATCATCTACACACTGGGTAAACTCAATAATAAAGAAATGAAAGAATGGAAGGAGAGGTTAGGATAGGCTCATTGGTATTTGGAGATTCTGTCCAGACAACTACCTGgaatactagtctaattgtctagagacctaatttagtcctggctctgctgcttatgatattaagcaaattgtttaatttctgggctccagtttctccatatgtaaaaatagaaatagtaataccctgcctacTGTATGACAATGACTATAATGATAAACATAGTACCATCCTTAGGATGCTTTTACTGAAAGAAAGTTGTTTCTGCGTTTTTTTTGTTGTTGTTGTTGGCTTGGGGATGAATGTCAGAAATCTCATGTAGCAAAAAATTGCTGTCAACTCCCCAAGAAGATAAATTAGTGTTTTTATTGCATTCAATTTCTTAAATGAAAATGTTTCATAAATTAGTGTTTTAATGTCTTTTAGACCAGTAAACATGGTAATACATGGAATTATAGTTTTGAAATCCTATAAGGGAAACACTATAAATTCTTCATATTCCTTTTCTGATAGGTCAACCTTAAACCACCAAGGACTCTGAATAGAGTAGGACAGTTGATAAACCCTACTATACACCCCACATAAAAATGTTAGAGCTGTACAATCAGCAACTGTACTTACAATGATAGTGCCTATATTTAAATTTTCCCAAATGCCAAGCTCTGATGGTCTACTTTTTTTGAGCAATAGTTTGGATTTGCAACTGCCTGTAAGTAAATAAGCAAAGGTTCTTGTTGCAAGCTCTGGCCTGGATTATCTGTCAAGGGGCCATGACTCTAGTGGAAAGCACATAGTTCTTACACCTCAGCTCAGCCAGTCCCTGACCTAACCAGGTTCCAGAGAAGGTCTTGAAGCTAGCTGTGCCGGGTCCTAGATTCATAGAAATGGAAGAACCAAGGAATGTAGCTCTTGCCTCACCTTCCAACCCCTGCAGATAATGGCTGAATCTAGAAGGAAAAACTTCCTAGCCTCTTGGGCTGCTCCTATCCCCGCCTCCCAGTGTACAGCCCCTCTCCTCTCTCTTTAGCCCCCTCTTTCCCTCTTTTCCCCTTTTATATTGTCACACAAATCAGGGACAGTAGAATCACATTATAACCTACTTTGCTATAGTTATGCAGATCAAAAGTCAAATCATCTTTCCTGAAACCTAGCTAAGGCATGCACCAACTGCCTAGTACTTACCTGTAAGTATATCAGGCATTGGTCCTGCCCCTTGATACCAGCAATATAAAAGGTTCCATTAGAAGAGACTATTGAATCTGAATACAGTTGCAGTAAGTGGCACCAATAAAGATATTATACTTTATTATAGTCTCAGAGTTTAGGGCTCCTGGATGCAGCATACACGTTTATGTAAATAGACAATCAGGGTAGGCCTAGCTTAACTAGAAAAATTCTGGTAGCCTTACTGCAGCTGTCTATATGCAGAACAATGAGGGAGATATTTTGTGATCTCATGGGCCAGCCCACATTGTACCCATCTCATACATCAGCCAGCATCAGAATCTCTCCTCTAGGTCATTAAATACTGTTGAAATGTTTCAAAGCTCCTGAATATAATGATTAAATTATTGATGAATTAAGATATACAACTGCTTAGAGAAGTTTAAATATTTCCTGTTGCCTCAGAATGTAATAGAAATTAATAGCTTTCTTTTCAGCTATCTTAATTACTGCAAATGTTTGTTTTCAGTTTTAAGTAAAAAAAAATTGCTTTTACTATAAAACTTTAAGCCTGAAGTCATATGAATAAAAATAATGGTGTATATAATGCAAACTTTTCTGTATCTAACTTAAAATTTTAAAAACTGCTATTATTAAAACATTTTGATGTATGTGTTGAAAATGTTTAGTTATGCATGTTTATTAACCAAAAATGATAATAACCATTCAGTATAGTGATTGATAACACAATCAGTAAATAATCTTGTCTATGGTATTTTTTTTTCTAGTTGATGTGCCTGCCCAGAAAACCatatatataataatttatatttttCTATAGGAAAATAGAATTAGTTTTCCTCATCTCCTATGATATTTAGCTGTCCATAGTGTGATGGCTATGTTATGTTAAAGGGTAACTTCTAGAATGGTGGTAATTTCTGAGATTAGCAACCCTTTGTCTGATAATGGCCATGTTAATGATTAACTTCTGTCACCACTGTAGATTCCTGGATTCACAGACGTCTATAAAGACTTCCAAAAAACAAATTGTTGAGATTTGATTGCTAAATCATAATGATCCTTTCAAGCAGGAATTAAAACCATTTTCTTGAAAATCAATTATTTATGTGCATTGGTTTTGAATAATGTCTTTTACTCTGAATTCTCATATGTATTTTTAAAAGCATGAAATATGAATTCAAAATTTGCACAGTATAACAGTAAGTATTCAGAGGAAATAAAGACTTTTTAATGCCT 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